Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRN |
Texto Completo: | https://repositorio.ufrn.br/jspui/handle/123456789/27644 |
Resumo: | The majority of the hereditary triple-negative breast cancers (TNBCs) are associated with BRCA1 germline mutations. Nevertheless, the understanding of the role of BRCA1 deficiency in the TNBC tumorigenesis is poor. In this sense, we performed whole-exome sequencing of triplet samples (leucocyte, tumor, and normal-adjacent breast tissue) for 10 cases of early-onset TNBC, including 5 hereditary (with BRCA1 germline pathogenic mutation) and 5 sporadic (with no BRCA1 or BRCA2 germline pathogenic mutations), for assessing the somatic mutation repertoire. Protein-affecting somatic mutations were identified for both mammary tissues, and Ingenuity Pathway Analysis was used to investigate gene interactions. BRCA1 and RAD51C somatic promoter methylation in tumor samples was also investigated by bisulfite sequencing. Sporadic tumors had higher proportion of driver mutations (≥25% allele frequency) than BRCA1 hereditary tumors, whereas no difference was detected in the normal breast samples. Distinct gene networks were obtained from the driver genes in each group. The Cancer Genome Atlas data analysis of TNBC classified as hereditary and sporadic reinforced our findings. The data presented here indicate that in the absence of BRCA1 germline mutations, a higher number of driver mutations are required for tumor development and that different defective processes are operating in the tumorigenesis of hereditary and sporadic TNBC in young women. |
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Ferreira, Elisa NapolitanoBrianese, Rafael CanfieldAlmeida, Renan Valieris Bueno deDrummond, Rodrigo DuarteSouza, Jorge Estefano deSilva, Israel Tojal daSouza, Sandro José deCarraro, Dirce Maria2019-09-05T16:29:47Z2019-09-05T16:29:47Z2019-08FERREIRA, E. N.; BRIANESE, R. C.; ALMEIDA, R. V. B.; DRUMMOND, R. D.; SOUZA, J. E.; SILVA, I. T.; SOUZA, S. J.; CARRARO, D. M. Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer. Transl Oncol., [s. l.], v. 12, n. 11, p. 1453-1460, ago. 2019. DOI: 10.1016/j.tranon.2019.07.016. Disponível em: https://www.sciencedirect.com/science/article/pii/S1936523319302232?via%3Dihub. Acesso em: 05 set. 2019.https://repositorio.ufrn.br/jspui/handle/123456789/2764410.1016/j.tranon.2019.07.016Breast neoplasmstriple negative breast neoplasmsBRCA1Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancerinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleThe majority of the hereditary triple-negative breast cancers (TNBCs) are associated with BRCA1 germline mutations. Nevertheless, the understanding of the role of BRCA1 deficiency in the TNBC tumorigenesis is poor. In this sense, we performed whole-exome sequencing of triplet samples (leucocyte, tumor, and normal-adjacent breast tissue) for 10 cases of early-onset TNBC, including 5 hereditary (with BRCA1 germline pathogenic mutation) and 5 sporadic (with no BRCA1 or BRCA2 germline pathogenic mutations), for assessing the somatic mutation repertoire. Protein-affecting somatic mutations were identified for both mammary tissues, and Ingenuity Pathway Analysis was used to investigate gene interactions. BRCA1 and RAD51C somatic promoter methylation in tumor samples was also investigated by bisulfite sequencing. Sporadic tumors had higher proportion of driver mutations (≥25% allele frequency) than BRCA1 hereditary tumors, whereas no difference was detected in the normal breast samples. Distinct gene networks were obtained from the driver genes in each group. The Cancer Genome Atlas data analysis of TNBC classified as hereditary and sporadic reinforced our findings. The data presented here indicate that in the absence of BRCA1 germline mutations, a higher number of driver mutations are required for tumor development and that different defective processes are operating in the tumorigenesis of hereditary and sporadic TNBC in young women.engreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNinfo:eu-repo/semantics/openAccessLICENSElicense.txtlicense.txttext/plain; charset=utf-81484https://repositorio.ufrn.br/bitstream/123456789/27644/2/license.txte9597aa2854d128fd968be5edc8a28d9MD52ORIGINALSandroSouza_ICe_2019_Influence of BRCA1.pdfSandroSouza_ICe_2019_Influence of BRCA1.pdfSandroSouza_ICe_2019_Influence of BRCA1application/pdf1598373https://repositorio.ufrn.br/bitstream/123456789/27644/1/SandroSouza_ICe_2019_Influence%20of%20BRCA1.pdf45a6fdb267dde0157846787c299c8262MD51TEXTSandroSouza_ICe_2019_Influence of BRCA1.pdf.txtSandroSouza_ICe_2019_Influence of BRCA1.pdf.txtExtracted texttext/plain34859https://repositorio.ufrn.br/bitstream/123456789/27644/3/SandroSouza_ICe_2019_Influence%20of%20BRCA1.pdf.txtfc15dc40a92fbbe1e01334477850157bMD53THUMBNAILSandroSouza_ICe_2019_Influence of BRCA1.pdf.jpgSandroSouza_ICe_2019_Influence of BRCA1.pdf.jpgGenerated Thumbnailimage/jpeg1741https://repositorio.ufrn.br/bitstream/123456789/27644/4/SandroSouza_ICe_2019_Influence%20of%20BRCA1.pdf.jpg64d81a13189f416313157f2029369475MD54123456789/276442019-09-08 02:16:56.9oai:https://repositorio.ufrn.br:123456789/27644Tk9OLUVYQ0xVU0lWRSBESVNUUklCVVRJT04gTElDRU5TRQoKCkJ5IHNpZ25pbmcgYW5kIGRlbGl2ZXJpbmcgdGhpcyBsaWNlbnNlLCBNci4gKGF1dGhvciBvciBjb3B5cmlnaHQgaG9sZGVyKToKCgphKSBHcmFudHMgdGhlIFVuaXZlcnNpZGFkZSBGZWRlcmFsIFJpbyBHcmFuZGUgZG8gTm9ydGUgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgb2YKcmVwcm9kdWNlLCBjb252ZXJ0IChhcyBkZWZpbmVkIGJlbG93KSwgY29tbXVuaWNhdGUgYW5kIC8gb3IKZGlzdHJpYnV0ZSB0aGUgZGVsaXZlcmVkIGRvY3VtZW50IChpbmNsdWRpbmcgYWJzdHJhY3QgLyBhYnN0cmFjdCkgaW4KZGlnaXRhbCBvciBwcmludGVkIGZvcm1hdCBhbmQgaW4gYW55IG1lZGl1bS4KCmIpIERlY2xhcmVzIHRoYXQgdGhlIGRvY3VtZW50IHN1Ym1pdHRlZCBpcyBpdHMgb3JpZ2luYWwgd29yaywgYW5kIHRoYXQKeW91IGhhdmUgdGhlIHJpZ2h0IHRvIGdyYW50IHRoZSByaWdodHMgY29udGFpbmVkIGluIHRoaXMgbGljZW5zZS4gRGVjbGFyZXMKdGhhdCB0aGUgZGVsaXZlcnkgb2YgdGhlIGRvY3VtZW50IGRvZXMgbm90IGluZnJpbmdlLCBhcyBmYXIgYXMgaXQgaXMKdGhlIHJpZ2h0cyBvZiBhbnkgb3RoZXIgcGVyc29uIG9yIGVudGl0eS4KCmMpIElmIHRoZSBkb2N1bWVudCBkZWxpdmVyZWQgY29udGFpbnMgbWF0ZXJpYWwgd2hpY2ggZG9lcyBub3QKcmlnaHRzLCBkZWNsYXJlcyB0aGF0IGl0IGhhcyBvYnRhaW5lZCBhdXRob3JpemF0aW9uIGZyb20gdGhlIGhvbGRlciBvZiB0aGUKY29weXJpZ2h0IHRvIGdyYW50IHRoZSBVbml2ZXJzaWRhZGUgRmVkZXJhbCBkbyBSaW8gR3JhbmRlIGRvIE5vcnRlIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdCB0aGlzIG1hdGVyaWFsIHdob3NlIHJpZ2h0cyBhcmUgb2YKdGhpcmQgcGFydGllcyBpcyBjbGVhcmx5IGlkZW50aWZpZWQgYW5kIHJlY29nbml6ZWQgaW4gdGhlIHRleHQgb3IKY29udGVudCBvZiB0aGUgZG9jdW1lbnQgZGVsaXZlcmVkLgoKSWYgdGhlIGRvY3VtZW50IHN1Ym1pdHRlZCBpcyBiYXNlZCBvbiBmdW5kZWQgb3Igc3VwcG9ydGVkIHdvcmsKYnkgYW5vdGhlciBpbnN0aXR1dGlvbiBvdGhlciB0aGFuIHRoZSBVbml2ZXJzaWRhZGUgRmVkZXJhbCBkbyBSaW8gR3JhbmRlIGRvIE5vcnRlLCBkZWNsYXJlcyB0aGF0IGl0IGhhcyBmdWxmaWxsZWQgYW55IG9ibGlnYXRpb25zIHJlcXVpcmVkIGJ5IHRoZSByZXNwZWN0aXZlIGFncmVlbWVudCBvciBhZ3JlZW1lbnQuCgpUaGUgVW5pdmVyc2lkYWRlIEZlZGVyYWwgZG8gUmlvIEdyYW5kZSBkbyBOb3J0ZSB3aWxsIGNsZWFybHkgaWRlbnRpZnkgaXRzIG5hbWUgKHMpIGFzIHRoZSBhdXRob3IgKHMpIG9yIGhvbGRlciAocykgb2YgdGhlIGRvY3VtZW50J3MgcmlnaHRzCmRlbGl2ZXJlZCwgYW5kIHdpbGwgbm90IG1ha2UgYW55IGNoYW5nZXMsIG90aGVyIHRoYW4gdGhvc2UgcGVybWl0dGVkIGJ5CnRoaXMgbGljZW5zZQo=Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2019-09-08T05:16:56Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false |
dc.title.pt_BR.fl_str_mv |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
title |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
spellingShingle |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer Ferreira, Elisa Napolitano Breast neoplasms triple negative breast neoplasms BRCA1 |
title_short |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
title_full |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
title_fullStr |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
title_full_unstemmed |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
title_sort |
Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer |
author |
Ferreira, Elisa Napolitano |
author_facet |
Ferreira, Elisa Napolitano Brianese, Rafael Canfield Almeida, Renan Valieris Bueno de Drummond, Rodrigo Duarte Souza, Jorge Estefano de Silva, Israel Tojal da Souza, Sandro José de Carraro, Dirce Maria |
author_role |
author |
author2 |
Brianese, Rafael Canfield Almeida, Renan Valieris Bueno de Drummond, Rodrigo Duarte Souza, Jorge Estefano de Silva, Israel Tojal da Souza, Sandro José de Carraro, Dirce Maria |
author2_role |
author author author author author author author |
dc.contributor.author.fl_str_mv |
Ferreira, Elisa Napolitano Brianese, Rafael Canfield Almeida, Renan Valieris Bueno de Drummond, Rodrigo Duarte Souza, Jorge Estefano de Silva, Israel Tojal da Souza, Sandro José de Carraro, Dirce Maria |
dc.subject.por.fl_str_mv |
Breast neoplasms triple negative breast neoplasms BRCA1 |
topic |
Breast neoplasms triple negative breast neoplasms BRCA1 |
description |
The majority of the hereditary triple-negative breast cancers (TNBCs) are associated with BRCA1 germline mutations. Nevertheless, the understanding of the role of BRCA1 deficiency in the TNBC tumorigenesis is poor. In this sense, we performed whole-exome sequencing of triplet samples (leucocyte, tumor, and normal-adjacent breast tissue) for 10 cases of early-onset TNBC, including 5 hereditary (with BRCA1 germline pathogenic mutation) and 5 sporadic (with no BRCA1 or BRCA2 germline pathogenic mutations), for assessing the somatic mutation repertoire. Protein-affecting somatic mutations were identified for both mammary tissues, and Ingenuity Pathway Analysis was used to investigate gene interactions. BRCA1 and RAD51C somatic promoter methylation in tumor samples was also investigated by bisulfite sequencing. Sporadic tumors had higher proportion of driver mutations (≥25% allele frequency) than BRCA1 hereditary tumors, whereas no difference was detected in the normal breast samples. Distinct gene networks were obtained from the driver genes in each group. The Cancer Genome Atlas data analysis of TNBC classified as hereditary and sporadic reinforced our findings. The data presented here indicate that in the absence of BRCA1 germline mutations, a higher number of driver mutations are required for tumor development and that different defective processes are operating in the tumorigenesis of hereditary and sporadic TNBC in young women. |
publishDate |
2019 |
dc.date.accessioned.fl_str_mv |
2019-09-05T16:29:47Z |
dc.date.available.fl_str_mv |
2019-09-05T16:29:47Z |
dc.date.issued.fl_str_mv |
2019-08 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
FERREIRA, E. N.; BRIANESE, R. C.; ALMEIDA, R. V. B.; DRUMMOND, R. D.; SOUZA, J. E.; SILVA, I. T.; SOUZA, S. J.; CARRARO, D. M. Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer. Transl Oncol., [s. l.], v. 12, n. 11, p. 1453-1460, ago. 2019. DOI: 10.1016/j.tranon.2019.07.016. Disponível em: https://www.sciencedirect.com/science/article/pii/S1936523319302232?via%3Dihub. Acesso em: 05 set. 2019. |
dc.identifier.uri.fl_str_mv |
https://repositorio.ufrn.br/jspui/handle/123456789/27644 |
dc.identifier.doi.none.fl_str_mv |
10.1016/j.tranon.2019.07.016 |
identifier_str_mv |
FERREIRA, E. N.; BRIANESE, R. C.; ALMEIDA, R. V. B.; DRUMMOND, R. D.; SOUZA, J. E.; SILVA, I. T.; SOUZA, S. J.; CARRARO, D. M. Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer. Transl Oncol., [s. l.], v. 12, n. 11, p. 1453-1460, ago. 2019. DOI: 10.1016/j.tranon.2019.07.016. Disponível em: https://www.sciencedirect.com/science/article/pii/S1936523319302232?via%3Dihub. Acesso em: 05 set. 2019. 10.1016/j.tranon.2019.07.016 |
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https://repositorio.ufrn.br/jspui/handle/123456789/27644 |
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eng |
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