Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer

Detalhes bibliográficos
Autor(a) principal: Ferreira, Elisa Napolitano
Data de Publicação: 2019
Outros Autores: Brianese, Rafael Canfield, Almeida, Renan Valieris Bueno de, Drummond, Rodrigo Duarte, Souza, Jorge Estefano de, Silva, Israel Tojal da, Souza, Sandro José de, Carraro, Dirce Maria
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/jspui/handle/123456789/27644
Resumo: The majority of the hereditary triple-negative breast cancers (TNBCs) are associated with BRCA1 germline mutations. Nevertheless, the understanding of the role of BRCA1 deficiency in the TNBC tumorigenesis is poor. In this sense, we performed whole-exome sequencing of triplet samples (leucocyte, tumor, and normal-adjacent breast tissue) for 10 cases of early-onset TNBC, including 5 hereditary (with BRCA1 germline pathogenic mutation) and 5 sporadic (with no BRCA1 or BRCA2 germline pathogenic mutations), for assessing the somatic mutation repertoire. Protein-affecting somatic mutations were identified for both mammary tissues, and Ingenuity Pathway Analysis was used to investigate gene interactions. BRCA1 and RAD51C somatic promoter methylation in tumor samples was also investigated by bisulfite sequencing. Sporadic tumors had higher proportion of driver mutations (≥25% allele frequency) than BRCA1 hereditary tumors, whereas no difference was detected in the normal breast samples. Distinct gene networks were obtained from the driver genes in each group. The Cancer Genome Atlas data analysis of TNBC classified as hereditary and sporadic reinforced our findings. The data presented here indicate that in the absence of BRCA1 germline mutations, a higher number of driver mutations are required for tumor development and that different defective processes are operating in the tumorigenesis of hereditary and sporadic TNBC in young women.
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spelling Ferreira, Elisa NapolitanoBrianese, Rafael CanfieldAlmeida, Renan Valieris Bueno deDrummond, Rodrigo DuarteSouza, Jorge Estefano deSilva, Israel Tojal daSouza, Sandro José deCarraro, Dirce Maria2019-09-05T16:29:47Z2019-09-05T16:29:47Z2019-08FERREIRA, E. N.; BRIANESE, R. C.; ALMEIDA, R. V. B.; DRUMMOND, R. D.; SOUZA, J. E.; SILVA, I. T.; SOUZA, S. J.; CARRARO, D. M. Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer. Transl Oncol., [s. l.], v. 12, n. 11, p. 1453-1460, ago. 2019. DOI: 10.1016/j.tranon.2019.07.016. Disponível em: https://www.sciencedirect.com/science/article/pii/S1936523319302232?via%3Dihub. Acesso em: 05 set. 2019.https://repositorio.ufrn.br/jspui/handle/123456789/2764410.1016/j.tranon.2019.07.016Breast neoplasmstriple negative breast neoplasmsBRCA1Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancerinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleThe majority of the hereditary triple-negative breast cancers (TNBCs) are associated with BRCA1 germline mutations. Nevertheless, the understanding of the role of BRCA1 deficiency in the TNBC tumorigenesis is poor. In this sense, we performed whole-exome sequencing of triplet samples (leucocyte, tumor, and normal-adjacent breast tissue) for 10 cases of early-onset TNBC, including 5 hereditary (with BRCA1 germline pathogenic mutation) and 5 sporadic (with no BRCA1 or BRCA2 germline pathogenic mutations), for assessing the somatic mutation repertoire. Protein-affecting somatic mutations were identified for both mammary tissues, and Ingenuity Pathway Analysis was used to investigate gene interactions. BRCA1 and RAD51C somatic promoter methylation in tumor samples was also investigated by bisulfite sequencing. Sporadic tumors had higher proportion of driver mutations (≥25% allele frequency) than BRCA1 hereditary tumors, whereas no difference was detected in the normal breast samples. Distinct gene networks were obtained from the driver genes in each group. The Cancer Genome Atlas data analysis of TNBC classified as hereditary and sporadic reinforced our findings. The data presented here indicate that in the absence of BRCA1 germline mutations, a higher number of driver mutations are required for tumor development and that different defective processes are operating in the tumorigenesis of hereditary and sporadic TNBC in young women.engreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNinfo:eu-repo/semantics/openAccessLICENSElicense.txtlicense.txttext/plain; charset=utf-81484https://repositorio.ufrn.br/bitstream/123456789/27644/2/license.txte9597aa2854d128fd968be5edc8a28d9MD52ORIGINALSandroSouza_ICe_2019_Influence of BRCA1.pdfSandroSouza_ICe_2019_Influence of BRCA1.pdfSandroSouza_ICe_2019_Influence of BRCA1application/pdf1598373https://repositorio.ufrn.br/bitstream/123456789/27644/1/SandroSouza_ICe_2019_Influence%20of%20BRCA1.pdf45a6fdb267dde0157846787c299c8262MD51TEXTSandroSouza_ICe_2019_Influence of BRCA1.pdf.txtSandroSouza_ICe_2019_Influence of BRCA1.pdf.txtExtracted texttext/plain34859https://repositorio.ufrn.br/bitstream/123456789/27644/3/SandroSouza_ICe_2019_Influence%20of%20BRCA1.pdf.txtfc15dc40a92fbbe1e01334477850157bMD53THUMBNAILSandroSouza_ICe_2019_Influence of BRCA1.pdf.jpgSandroSouza_ICe_2019_Influence of BRCA1.pdf.jpgGenerated Thumbnailimage/jpeg1741https://repositorio.ufrn.br/bitstream/123456789/27644/4/SandroSouza_ICe_2019_Influence%20of%20BRCA1.pdf.jpg64d81a13189f416313157f2029369475MD54123456789/276442019-09-08 02:16:56.9oai:https://repositorio.ufrn.br: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Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2019-09-08T05:16:56Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.pt_BR.fl_str_mv Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
title Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
spellingShingle Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
Ferreira, Elisa Napolitano
Breast neoplasms
triple negative breast neoplasms
BRCA1
title_short Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
title_full Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
title_fullStr Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
title_full_unstemmed Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
title_sort Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer
author Ferreira, Elisa Napolitano
author_facet Ferreira, Elisa Napolitano
Brianese, Rafael Canfield
Almeida, Renan Valieris Bueno de
Drummond, Rodrigo Duarte
Souza, Jorge Estefano de
Silva, Israel Tojal da
Souza, Sandro José de
Carraro, Dirce Maria
author_role author
author2 Brianese, Rafael Canfield
Almeida, Renan Valieris Bueno de
Drummond, Rodrigo Duarte
Souza, Jorge Estefano de
Silva, Israel Tojal da
Souza, Sandro José de
Carraro, Dirce Maria
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Ferreira, Elisa Napolitano
Brianese, Rafael Canfield
Almeida, Renan Valieris Bueno de
Drummond, Rodrigo Duarte
Souza, Jorge Estefano de
Silva, Israel Tojal da
Souza, Sandro José de
Carraro, Dirce Maria
dc.subject.por.fl_str_mv Breast neoplasms
triple negative breast neoplasms
BRCA1
topic Breast neoplasms
triple negative breast neoplasms
BRCA1
description The majority of the hereditary triple-negative breast cancers (TNBCs) are associated with BRCA1 germline mutations. Nevertheless, the understanding of the role of BRCA1 deficiency in the TNBC tumorigenesis is poor. In this sense, we performed whole-exome sequencing of triplet samples (leucocyte, tumor, and normal-adjacent breast tissue) for 10 cases of early-onset TNBC, including 5 hereditary (with BRCA1 germline pathogenic mutation) and 5 sporadic (with no BRCA1 or BRCA2 germline pathogenic mutations), for assessing the somatic mutation repertoire. Protein-affecting somatic mutations were identified for both mammary tissues, and Ingenuity Pathway Analysis was used to investigate gene interactions. BRCA1 and RAD51C somatic promoter methylation in tumor samples was also investigated by bisulfite sequencing. Sporadic tumors had higher proportion of driver mutations (≥25% allele frequency) than BRCA1 hereditary tumors, whereas no difference was detected in the normal breast samples. Distinct gene networks were obtained from the driver genes in each group. The Cancer Genome Atlas data analysis of TNBC classified as hereditary and sporadic reinforced our findings. The data presented here indicate that in the absence of BRCA1 germline mutations, a higher number of driver mutations are required for tumor development and that different defective processes are operating in the tumorigenesis of hereditary and sporadic TNBC in young women.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-09-05T16:29:47Z
dc.date.available.fl_str_mv 2019-09-05T16:29:47Z
dc.date.issued.fl_str_mv 2019-08
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.citation.fl_str_mv FERREIRA, E. N.; BRIANESE, R. C.; ALMEIDA, R. V. B.; DRUMMOND, R. D.; SOUZA, J. E.; SILVA, I. T.; SOUZA, S. J.; CARRARO, D. M. Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer. Transl Oncol., [s. l.], v. 12, n. 11, p. 1453-1460, ago. 2019. DOI: 10.1016/j.tranon.2019.07.016. Disponível em: https://www.sciencedirect.com/science/article/pii/S1936523319302232?via%3Dihub. Acesso em: 05 set. 2019.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/jspui/handle/123456789/27644
dc.identifier.doi.none.fl_str_mv 10.1016/j.tranon.2019.07.016
identifier_str_mv FERREIRA, E. N.; BRIANESE, R. C.; ALMEIDA, R. V. B.; DRUMMOND, R. D.; SOUZA, J. E.; SILVA, I. T.; SOUZA, S. J.; CARRARO, D. M. Influence of BRCA1 germline mutations in the somatic mutational burden of triple-negative breast cancer. Transl Oncol., [s. l.], v. 12, n. 11, p. 1453-1460, ago. 2019. DOI: 10.1016/j.tranon.2019.07.016. Disponível em: https://www.sciencedirect.com/science/article/pii/S1936523319302232?via%3Dihub. Acesso em: 05 set. 2019.
10.1016/j.tranon.2019.07.016
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