Ulcer Segmentation and Tissue Classification using Color Texture Clustering

Detalhes bibliográficos
Autor(a) principal: Marques, Vítor de Godeiro
Data de Publicação: 2018
Tipo de documento: Trabalho de conclusão de curso
Idioma: eng
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/handle/123456789/34203
Resumo: Chronic Wounds are ulcers presenting a difficult or nearly interrupted cicatrization process that increases the risk of complications to the health of patients, like amputations and infections. This research proposes a general noninvasive methodology for the segmentation and analysis of images of chronic wounds by computing the wound areas affected by necrosis, as opposed to invasive techniques that are commonly used for this calculation, such as manual planimetry with plastic films. We investigated algorithms to perform the segmentation of wounds and classification of tissues as Necrotic, Granulation or Slough. In the proposed methodology, we used histogram based textural descriptions, that were compared by using the Earth Mover's Distance, and proposed a color space reduction methodology that increased the reported accuracies, specificities, sensitivities and Dice coefficients. We also developed a mobile app prototype to show that it is possible to employ such application for supporting Larval Therapy on mobile devices.
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spelling Marques, Vítor de GodeiroBruno Santana da SilvaCanuto, Anne Magaly de PaulaSantos, Selan Rodrigues dosCarvalho, Bruno Motta de2018-12-07T19:42:11Z2021-09-20T11:47:02Z2018-12-07T19:42:11Z2021-09-20T11:47:02Z2018-11-2320180008316Marques, Vítor de Godeiro. Ulcer segmentation and tissue classification using color texture clustering. 85f. Monografia (Bacharelado em Ciência da Computação) - Departamento de Informática e Matemática Aplicada Universidade Federal do Rio Grande do Norte. Natal, 2018.https://repositorio.ufrn.br/handle/123456789/34203Universidade Federal do Rio Grande do NorteUFRNBrasilCiência da ComputaçãoLarval therapyChronic woundsImage segmentationTissue classificationColor image analysisClusteringUlcer Segmentation and Tissue Classification using Color Texture Clusteringinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/bachelorThesisChronic Wounds are ulcers presenting a difficult or nearly interrupted cicatrization process that increases the risk of complications to the health of patients, like amputations and infections. This research proposes a general noninvasive methodology for the segmentation and analysis of images of chronic wounds by computing the wound areas affected by necrosis, as opposed to invasive techniques that are commonly used for this calculation, such as manual planimetry with plastic films. We investigated algorithms to perform the segmentation of wounds and classification of tissues as Necrotic, Granulation or Slough. In the proposed methodology, we used histogram based textural descriptions, that were compared by using the Earth Mover's Distance, and proposed a color space reduction methodology that increased the reported accuracies, specificities, sensitivities and Dice coefficients. We also developed a mobile app prototype to show that it is possible to employ such application for supporting Larval Therapy on mobile devices.engreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNinfo:eu-repo/semantics/openAccessORIGINALUlcerSegmentationClassification_Marques_2018.pdfapplication/pdf27362084https://repositorio.ufrn.br/bitstream/123456789/34203/1/UlcerSegmentationClassification_Marques_2018.pdfe799629e81c5de4fb83f3c75a4a88a22MD51LICENSElicense.txttext/plain1748https://repositorio.ufrn.br/bitstream/123456789/34203/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52CC-LICENSElicense_rdfapplication/octet-stream701https://repositorio.ufrn.br/bitstream/123456789/34203/3/license_rdf42fd4ad1e89814f5e4a476b409eb708cMD53TEXTUlcerSegmentationClassification_marques_2018.pdf.txtExtracted texttext/plain124529https://repositorio.ufrn.br/bitstream/123456789/34203/4/UlcerSegmentationClassification_marques_2018.pdf.txt21b1e5dd98a7b212919ad5bb46fe2599MD54123456789/342032023-03-09 19:24:56.153oai:https://repositorio.ufrn.br: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Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2023-03-09T22:24:56Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.pt_BR.fl_str_mv Ulcer Segmentation and Tissue Classification using Color Texture Clustering
title Ulcer Segmentation and Tissue Classification using Color Texture Clustering
spellingShingle Ulcer Segmentation and Tissue Classification using Color Texture Clustering
Marques, Vítor de Godeiro
Larval therapy
Chronic wounds
Image segmentation
Tissue classification
Color image analysis
Clustering
title_short Ulcer Segmentation and Tissue Classification using Color Texture Clustering
title_full Ulcer Segmentation and Tissue Classification using Color Texture Clustering
title_fullStr Ulcer Segmentation and Tissue Classification using Color Texture Clustering
title_full_unstemmed Ulcer Segmentation and Tissue Classification using Color Texture Clustering
title_sort Ulcer Segmentation and Tissue Classification using Color Texture Clustering
author Marques, Vítor de Godeiro
author_facet Marques, Vítor de Godeiro
author_role author
dc.contributor.referees1.none.fl_str_mv Canuto, Anne Magaly de Paula
dc.contributor.referees2.none.fl_str_mv Santos, Selan Rodrigues dos
dc.contributor.author.fl_str_mv Marques, Vítor de Godeiro
dc.contributor.advisor-co1.fl_str_mv Bruno Santana da Silva
dc.contributor.advisor1.fl_str_mv Carvalho, Bruno Motta de
contributor_str_mv Bruno Santana da Silva
Carvalho, Bruno Motta de
dc.subject.por.fl_str_mv Larval therapy
Chronic wounds
Image segmentation
Tissue classification
Color image analysis
Clustering
topic Larval therapy
Chronic wounds
Image segmentation
Tissue classification
Color image analysis
Clustering
description Chronic Wounds are ulcers presenting a difficult or nearly interrupted cicatrization process that increases the risk of complications to the health of patients, like amputations and infections. This research proposes a general noninvasive methodology for the segmentation and analysis of images of chronic wounds by computing the wound areas affected by necrosis, as opposed to invasive techniques that are commonly used for this calculation, such as manual planimetry with plastic films. We investigated algorithms to perform the segmentation of wounds and classification of tissues as Necrotic, Granulation or Slough. In the proposed methodology, we used histogram based textural descriptions, that were compared by using the Earth Mover's Distance, and proposed a color space reduction methodology that increased the reported accuracies, specificities, sensitivities and Dice coefficients. We also developed a mobile app prototype to show that it is possible to employ such application for supporting Larval Therapy on mobile devices.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-12-07T19:42:11Z
2021-09-20T11:47:02Z
dc.date.available.fl_str_mv 2018-12-07T19:42:11Z
2021-09-20T11:47:02Z
dc.date.issued.fl_str_mv 2018-11-23
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/bachelorThesis
format bachelorThesis
status_str publishedVersion
dc.identifier.pt_BR.fl_str_mv 20180008316
dc.identifier.citation.fl_str_mv Marques, Vítor de Godeiro. Ulcer segmentation and tissue classification using color texture clustering. 85f. Monografia (Bacharelado em Ciência da Computação) - Departamento de Informática e Matemática Aplicada Universidade Federal do Rio Grande do Norte. Natal, 2018.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/handle/123456789/34203
identifier_str_mv 20180008316
Marques, Vítor de Godeiro. Ulcer segmentation and tissue classification using color texture clustering. 85f. Monografia (Bacharelado em Ciência da Computação) - Departamento de Informática e Matemática Aplicada Universidade Federal do Rio Grande do Norte. Natal, 2018.
url https://repositorio.ufrn.br/handle/123456789/34203
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal do Rio Grande do Norte
dc.publisher.initials.fl_str_mv UFRN
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Ciência da Computação
publisher.none.fl_str_mv Universidade Federal do Rio Grande do Norte
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFRN
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