Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria

Bibliographic Details
Main Author: Santos, Paulo Pitasse
Publication Date: 2022
Format: Doctoral thesis
Language: por
Source: Biblioteca Digital de Teses e Dissertações da UFRRJ
Download full: https://tede.ufrrj.br/jspui/handle/jspui/5642
Summary: Peptides are composed of amino acids linked in sequence and comprise a class of molecules of interest within medicinal chemistry. Both for their high selectivity for specific targets and for the complexity of their structures, which allow them to be applied for different purposes, such as antimicrobials or cell penetrating agents conjugated to drugs. Peptides and conjugates are potentially applicable on areas lacking therapeutic innovation, such as the development of new antibiotics for the treatment of multidrug-resistant bacteria or new chemotherapeutic agents for the treatment of Chagas disease. In this work they are proposed three series of cationic amphiphilic peptides with potential application as antimicrobials and cell penetrating peptides. The peptide-drug conjugation strategy with or without control of drug release in the intracellular environment is also evaluated, using peptides of interest within the proposed series and the type II polyproline helix P14LRR, which has been reported as an antimicrobial and cell penetrating peptide. The synthesis of peptides and conjugates involved the use of classical organic synthesis techniques, with optimization of protocols found in the literature, as well as the solid phase peptide synthesis methodology. The drugs linezolid (Lnz) and benznidazole (Bzd) were used for the conjugation strategy. Peptide-drug conjugates connected via a spacer containing a disulfide bond, reducible in the intracellular medium, were evaluated for their chemically induced drug release kinetics. Additionally, the peptides and conjugates were evaluated against Escherichia coli for their antimicrobial activity and insights on mechanisms of action. The design of the series made it possible to trace a structure-activity relationship and the peptide Ac-YGRRLLRRLL-NH2 was identified to be the most promising for this application (MIC = 2 ?M). The activity against amastigotes and trypomastigotes of Trypanosoma cruzi was also evaluated. The peptide Ac-YGRRLLRRLLRRLLRRLL-NH2 showed high effectiveness on inhibiting parasite infection in vitro (EC50 = 299 ? 86 nM). Experiments were also carried out to evaluate the cell penetration potential of the Fl-YGRRLLRRLL-NH2 peptide and the Lnz-Fl-P14LRR conjugate, both labeled with a fluorescein probe. They were used flow cytometry and confocal microscopy techniques to verify the accumulation of compounds in the intracellular environment and, in the case of Lnz-Fl-P14LRR, also an indicative of its colocation at the subcellular level with lysosomes.
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spelling Lima, Marco Edilson Freire de880.202.667-04Lima, D?bora Decot? Ricardo de875.362.007-06Chmielewski, JeanLima, Marco Edilson Freire deRomeiro, Nelilma CorreiaRodrigues, Juliany Cola FernandesAndricopulo, Adriano DefiniLacerda, Renata Barbosa120.854.447-09http://lattes.cnpq.br/1280725643158086Santos, Paulo Pitasse2022-05-11T19:03:58Z2022-01-10SANTOS, Paulo Pitasse. Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria. 2022. 170 f. Tese (Doutorado em Qu?mica, Qu?mica Org?nica) - Instituto de Qu?mica, Departamento de Qu?mica Org?nica, Universidade Federal Rural do Rio de Janeiro, Serop?dica, 2022.https://tede.ufrrj.br/jspui/handle/jspui/5642Peptides are composed of amino acids linked in sequence and comprise a class of molecules of interest within medicinal chemistry. Both for their high selectivity for specific targets and for the complexity of their structures, which allow them to be applied for different purposes, such as antimicrobials or cell penetrating agents conjugated to drugs. Peptides and conjugates are potentially applicable on areas lacking therapeutic innovation, such as the development of new antibiotics for the treatment of multidrug-resistant bacteria or new chemotherapeutic agents for the treatment of Chagas disease. In this work they are proposed three series of cationic amphiphilic peptides with potential application as antimicrobials and cell penetrating peptides. The peptide-drug conjugation strategy with or without control of drug release in the intracellular environment is also evaluated, using peptides of interest within the proposed series and the type II polyproline helix P14LRR, which has been reported as an antimicrobial and cell penetrating peptide. The synthesis of peptides and conjugates involved the use of classical organic synthesis techniques, with optimization of protocols found in the literature, as well as the solid phase peptide synthesis methodology. The drugs linezolid (Lnz) and benznidazole (Bzd) were used for the conjugation strategy. Peptide-drug conjugates connected via a spacer containing a disulfide bond, reducible in the intracellular medium, were evaluated for their chemically induced drug release kinetics. Additionally, the peptides and conjugates were evaluated against Escherichia coli for their antimicrobial activity and insights on mechanisms of action. The design of the series made it possible to trace a structure-activity relationship and the peptide Ac-YGRRLLRRLL-NH2 was identified to be the most promising for this application (MIC = 2 ?M). The activity against amastigotes and trypomastigotes of Trypanosoma cruzi was also evaluated. The peptide Ac-YGRRLLRRLLRRLLRRLL-NH2 showed high effectiveness on inhibiting parasite infection in vitro (EC50 = 299 ? 86 nM). Experiments were also carried out to evaluate the cell penetration potential of the Fl-YGRRLLRRLL-NH2 peptide and the Lnz-Fl-P14LRR conjugate, both labeled with a fluorescein probe. They were used flow cytometry and confocal microscopy techniques to verify the accumulation of compounds in the intracellular environment and, in the case of Lnz-Fl-P14LRR, also an indicative of its colocation at the subcellular level with lysosomes.Pept?deos s?o compostos por amino?cidos ligados em sequ?ncia e comp?em uma classe de mol?culas de interesse dentro da qu?mica medicinal. Tanto por sua alta seletividade por alvos espec?ficos quanto pela complexidade de suas estruturas, que permitem que sejam aplicados com diferentes fun??es, tal qual compostos de a??o antimicrobiana ou como agentes de penetra??o celular conjugados a f?rmacos. Pept?deos e conjugados possuem alto potencial de aplica??o em ?reas carentes de inova??o terap?utica, como no desenvolvimento de antibi?ticos para o tratamento de bact?rias multirresistentes ou de novos agentes quimioter?picos para o tratamento da doen?a de Chagas. Neste trabalho s?o propostas tr?s s?ries de pept?deos anfif?licos cati?nicos com potencial aplica??o como antimicrobianos e como pept?deos de penetra??o celular. Tamb?m se avalia a estrat?gia de conjuga??o pept?deo-f?rmaco com ou sem controle de libera??o do f?rmaco no ambiente intracelular, utilizando pept?deos de interesse dentro da s?rie proposta e o pept?deo helicoidal poliprolina tipo II P14LRR, de reconhecida atividade antimicrobiana e de penetra??o celular. A prepara??o de pept?deos e conjugados envolveu o emprego de t?cnicas de s?ntese org?nica cl?ssica, com otimiza??o de protocolos presentes na literatura, bem como a metodologia de s?ntese de pept?deos em fase s?lida. Os f?rmacos linezolida (Lnz) e benznidazol (Bzd) foram utilizados para a estrat?gia de conjuga??o. Os conjugados pept?deo-f?rmaco conectados via espa?ador contendo liga??o dissulfeto, redut?vel no meio intracelular, foram avaliados quanto sua ? cin?tica de libera??o de f?rmaco induzido quimicamente. Adicionalmente os pept?deos e conjugados foram avaliados sobre Escherichia coli quanto ? sua atividade antimicrobiana e poss?veis mecanismos de a??o. O desenho das s?ries permitiu tra?ar uma rela??o estrutura atividade, de modo que o pept?deo Ac-YGRRLLRRLL-NH2 se mostrou o mais promissor para esta aplica??o (MIC = 2 ?M). Foi avaliada tamb?m a atividade contra formas amastigotas e tripomastigotas de Trypanosoma cruzi, de modo que o pept?deo Ac-YGRRLLRRLLRRLLRRLL-NH2 apresentou alta efetividade na inibi??o da infec??o do parasito in vitro (EC50 = 299 ? 86 nM). Foram realizados ainda experimentos para a avalia??o do potencial de penetra??o celular do pept?deo Fl-YGRRLLRRLL-NH2 e do conjugado Lnz-Fl-P14LRR, ambos marcados com sonda de fluoresce?na. Atrav?s de t?cnicas de citometria e de microscopia confocal foi poss?vel constatar o ac?mulo dos compostos no meio intracelular e, no caso de Lnz-Fl-P14LRR, indicativos de sua colocaliza??o em n?vel subcelular com lisossomos.Submitted by Jorge Silva (jorgelmsilva@ufrrj.br) on 2022-05-11T19:03:58Z No. of bitstreams: 1 2022 - Paulo Pitasse Santos.pdf: 11707985 bytes, checksum: 31c138ee846110b4a98399e07268a693 (MD5)Made available in DSpace on 2022-05-11T19:03:58Z (GMT). No. of bitstreams: 1 2022 - Paulo Pitasse Santos.pdf: 11707985 bytes, checksum: 31c138ee846110b4a98399e07268a693 (MD5) Previous issue date: 2022-01-10CAPES - Coordena??o de Aperfei?oamento de Pessoal de N?vel SuperiorCNPq - Conselho Nacional de Desenvolvimento Cient?fico e Tecnol?gicoFAPERJ - Funda??o Carlos Chagas Filho de Amparo ? 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dc.title.por.fl_str_mv Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
dc.title.alternative.eng.fl_str_mv Planning, synthesis and biological assessment of the of peptides and peptide-drug conjugates, bearing antibacterial and antiparasitic activity
title Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
spellingShingle Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
Santos, Paulo Pitasse
pept?deos de penetra??o celular
libera??o de f?rmacos
s?ntese de pept?deos em fase s?lida
Trypanosoma cruzi
cell penetrating peptides
drug delivery
solid phase peptide synthesis
Qu?mica
title_short Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
title_full Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
title_fullStr Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
title_full_unstemmed Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
title_sort Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria
author Santos, Paulo Pitasse
author_facet Santos, Paulo Pitasse
author_role author
dc.contributor.advisor1.fl_str_mv Lima, Marco Edilson Freire de
dc.contributor.advisor1ID.fl_str_mv 880.202.667-04
dc.contributor.advisor-co1.fl_str_mv Lima, D?bora Decot? Ricardo de
dc.contributor.advisor-co1ID.fl_str_mv 875.362.007-06
dc.contributor.advisor-co2.fl_str_mv Chmielewski, Jean
dc.contributor.referee1.fl_str_mv Lima, Marco Edilson Freire de
dc.contributor.referee2.fl_str_mv Romeiro, Nelilma Correia
dc.contributor.referee3.fl_str_mv Rodrigues, Juliany Cola Fernandes
dc.contributor.referee4.fl_str_mv Andricopulo, Adriano Defini
dc.contributor.referee5.fl_str_mv Lacerda, Renata Barbosa
dc.contributor.authorID.fl_str_mv 120.854.447-09
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/1280725643158086
dc.contributor.author.fl_str_mv Santos, Paulo Pitasse
contributor_str_mv Lima, Marco Edilson Freire de
Lima, D?bora Decot? Ricardo de
Chmielewski, Jean
Lima, Marco Edilson Freire de
Romeiro, Nelilma Correia
Rodrigues, Juliany Cola Fernandes
Andricopulo, Adriano Defini
Lacerda, Renata Barbosa
dc.subject.por.fl_str_mv pept?deos de penetra??o celular
libera??o de f?rmacos
s?ntese de pept?deos em fase s?lida
Trypanosoma cruzi
topic pept?deos de penetra??o celular
libera??o de f?rmacos
s?ntese de pept?deos em fase s?lida
Trypanosoma cruzi
cell penetrating peptides
drug delivery
solid phase peptide synthesis
Qu?mica
dc.subject.eng.fl_str_mv cell penetrating peptides
drug delivery
solid phase peptide synthesis
dc.subject.cnpq.fl_str_mv Qu?mica
description Peptides are composed of amino acids linked in sequence and comprise a class of molecules of interest within medicinal chemistry. Both for their high selectivity for specific targets and for the complexity of their structures, which allow them to be applied for different purposes, such as antimicrobials or cell penetrating agents conjugated to drugs. Peptides and conjugates are potentially applicable on areas lacking therapeutic innovation, such as the development of new antibiotics for the treatment of multidrug-resistant bacteria or new chemotherapeutic agents for the treatment of Chagas disease. In this work they are proposed three series of cationic amphiphilic peptides with potential application as antimicrobials and cell penetrating peptides. The peptide-drug conjugation strategy with or without control of drug release in the intracellular environment is also evaluated, using peptides of interest within the proposed series and the type II polyproline helix P14LRR, which has been reported as an antimicrobial and cell penetrating peptide. The synthesis of peptides and conjugates involved the use of classical organic synthesis techniques, with optimization of protocols found in the literature, as well as the solid phase peptide synthesis methodology. The drugs linezolid (Lnz) and benznidazole (Bzd) were used for the conjugation strategy. Peptide-drug conjugates connected via a spacer containing a disulfide bond, reducible in the intracellular medium, were evaluated for their chemically induced drug release kinetics. Additionally, the peptides and conjugates were evaluated against Escherichia coli for their antimicrobial activity and insights on mechanisms of action. The design of the series made it possible to trace a structure-activity relationship and the peptide Ac-YGRRLLRRLL-NH2 was identified to be the most promising for this application (MIC = 2 ?M). The activity against amastigotes and trypomastigotes of Trypanosoma cruzi was also evaluated. The peptide Ac-YGRRLLRRLLRRLLRRLL-NH2 showed high effectiveness on inhibiting parasite infection in vitro (EC50 = 299 ? 86 nM). Experiments were also carried out to evaluate the cell penetration potential of the Fl-YGRRLLRRLL-NH2 peptide and the Lnz-Fl-P14LRR conjugate, both labeled with a fluorescein probe. They were used flow cytometry and confocal microscopy techniques to verify the accumulation of compounds in the intracellular environment and, in the case of Lnz-Fl-P14LRR, also an indicative of its colocation at the subcellular level with lysosomes.
publishDate 2022
dc.date.accessioned.fl_str_mv 2022-05-11T19:03:58Z
dc.date.issued.fl_str_mv 2022-01-10
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv SANTOS, Paulo Pitasse. Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria. 2022. 170 f. Tese (Doutorado em Qu?mica, Qu?mica Org?nica) - Instituto de Qu?mica, Departamento de Qu?mica Org?nica, Universidade Federal Rural do Rio de Janeiro, Serop?dica, 2022.
dc.identifier.uri.fl_str_mv https://tede.ufrrj.br/jspui/handle/jspui/5642
identifier_str_mv SANTOS, Paulo Pitasse. Planejamento, s?ntese e avalia??o da atividade biol?gica de pept?deos e conjugados pept?deo-f?rmacos, com atividade antibacteriana e antiparasit?ria. 2022. 170 f. Tese (Doutorado em Qu?mica, Qu?mica Org?nica) - Instituto de Qu?mica, Departamento de Qu?mica Org?nica, Universidade Federal Rural do Rio de Janeiro, Serop?dica, 2022.
url https://tede.ufrrj.br/jspui/handle/jspui/5642
dc.language.iso.fl_str_mv por
language por
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