Strategies to control inbreeding in a pig breeding program: a simulation study

Detalhes bibliográficos
Autor(a) principal: Lopes,Jader Silva
Data de Publicação: 2019
Outros Autores: Rorato,Paulo Roberto Nogara, Mello,Fernanda Cristina Breda, Freitas,Marcelo Silva de, Prestes,Alan Miranda, Garcia,Diogo Anastácio, Oliveira,Maurício Morgado de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Ciência Rural
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782019000700653
Resumo: ABSTRACT: The objective of this study was to evaluate, through data simulation, the impact of restrictions on the maximum number of full- and half-sibs selected for males and females on the level of inbreeding and genetic gain of the herd. Data came from real populations A and B, composed of Pietrain and Landrace breed pigs, respectively. To generate the simulated populations, a Fortran-language simulator was developed using the (co)variances of the breeding values and the productive and reproductive rates obtained from populations A and B. Two data files were created. The first contained the pedigree of the previous 10 years, with 21,906 and 251,343 animals in populations A and B, respectively. The second included breeding values for age to reach 110 Kg body weight, backfat thickness, and feed conversion, for both populations; longissimus dorsi muscle depth, for population A only; and number of live piglets at the 5th day of life per farrowing, for population B only. Three scenarios were simulated with ten generations by varying the restrictions on the number of full- and half-sibs selected for males and females, with 30 replicates per generation and scenario. Regardless of the mating strategy used in a closed production unit, there is an increase in inbreeding levels. Inbreeding increases are larger in populations of smaller effective size. Restrictions on the number of full- and half-sibs selected are effective in reducing increments in inbreeding. Restriction to a maximum of two full-sibs and three half-sibs for males and three full sisters for females provided the highest genetic gains.
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spelling Strategies to control inbreeding in a pig breeding program: a simulation studyfull-sibshalf-sibsLandrace breedPietrain breedselection strategiesABSTRACT: The objective of this study was to evaluate, through data simulation, the impact of restrictions on the maximum number of full- and half-sibs selected for males and females on the level of inbreeding and genetic gain of the herd. Data came from real populations A and B, composed of Pietrain and Landrace breed pigs, respectively. To generate the simulated populations, a Fortran-language simulator was developed using the (co)variances of the breeding values and the productive and reproductive rates obtained from populations A and B. Two data files were created. The first contained the pedigree of the previous 10 years, with 21,906 and 251,343 animals in populations A and B, respectively. The second included breeding values for age to reach 110 Kg body weight, backfat thickness, and feed conversion, for both populations; longissimus dorsi muscle depth, for population A only; and number of live piglets at the 5th day of life per farrowing, for population B only. Three scenarios were simulated with ten generations by varying the restrictions on the number of full- and half-sibs selected for males and females, with 30 replicates per generation and scenario. Regardless of the mating strategy used in a closed production unit, there is an increase in inbreeding levels. Inbreeding increases are larger in populations of smaller effective size. Restrictions on the number of full- and half-sibs selected are effective in reducing increments in inbreeding. Restriction to a maximum of two full-sibs and three half-sibs for males and three full sisters for females provided the highest genetic gains.Universidade Federal de Santa Maria2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782019000700653Ciência Rural v.49 n.7 2019reponame:Ciência Ruralinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM10.1590/0103-8478cr20180994info:eu-repo/semantics/openAccessLopes,Jader SilvaRorato,Paulo Roberto NogaraMello,Fernanda Cristina BredaFreitas,Marcelo Silva dePrestes,Alan MirandaGarcia,Diogo AnastácioOliveira,Maurício Morgado deeng2019-07-03T00:00:00ZRevista
dc.title.none.fl_str_mv Strategies to control inbreeding in a pig breeding program: a simulation study
title Strategies to control inbreeding in a pig breeding program: a simulation study
spellingShingle Strategies to control inbreeding in a pig breeding program: a simulation study
Lopes,Jader Silva
full-sibs
half-sibs
Landrace breed
Pietrain breed
selection strategies
title_short Strategies to control inbreeding in a pig breeding program: a simulation study
title_full Strategies to control inbreeding in a pig breeding program: a simulation study
title_fullStr Strategies to control inbreeding in a pig breeding program: a simulation study
title_full_unstemmed Strategies to control inbreeding in a pig breeding program: a simulation study
title_sort Strategies to control inbreeding in a pig breeding program: a simulation study
author Lopes,Jader Silva
author_facet Lopes,Jader Silva
Rorato,Paulo Roberto Nogara
Mello,Fernanda Cristina Breda
Freitas,Marcelo Silva de
Prestes,Alan Miranda
Garcia,Diogo Anastácio
Oliveira,Maurício Morgado de
author_role author
author2 Rorato,Paulo Roberto Nogara
Mello,Fernanda Cristina Breda
Freitas,Marcelo Silva de
Prestes,Alan Miranda
Garcia,Diogo Anastácio
Oliveira,Maurício Morgado de
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lopes,Jader Silva
Rorato,Paulo Roberto Nogara
Mello,Fernanda Cristina Breda
Freitas,Marcelo Silva de
Prestes,Alan Miranda
Garcia,Diogo Anastácio
Oliveira,Maurício Morgado de
dc.subject.por.fl_str_mv full-sibs
half-sibs
Landrace breed
Pietrain breed
selection strategies
topic full-sibs
half-sibs
Landrace breed
Pietrain breed
selection strategies
description ABSTRACT: The objective of this study was to evaluate, through data simulation, the impact of restrictions on the maximum number of full- and half-sibs selected for males and females on the level of inbreeding and genetic gain of the herd. Data came from real populations A and B, composed of Pietrain and Landrace breed pigs, respectively. To generate the simulated populations, a Fortran-language simulator was developed using the (co)variances of the breeding values and the productive and reproductive rates obtained from populations A and B. Two data files were created. The first contained the pedigree of the previous 10 years, with 21,906 and 251,343 animals in populations A and B, respectively. The second included breeding values for age to reach 110 Kg body weight, backfat thickness, and feed conversion, for both populations; longissimus dorsi muscle depth, for population A only; and number of live piglets at the 5th day of life per farrowing, for population B only. Three scenarios were simulated with ten generations by varying the restrictions on the number of full- and half-sibs selected for males and females, with 30 replicates per generation and scenario. Regardless of the mating strategy used in a closed production unit, there is an increase in inbreeding levels. Inbreeding increases are larger in populations of smaller effective size. Restrictions on the number of full- and half-sibs selected are effective in reducing increments in inbreeding. Restriction to a maximum of two full-sibs and three half-sibs for males and three full sisters for females provided the highest genetic gains.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782019000700653
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782019000700653
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0103-8478cr20180994
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
publisher.none.fl_str_mv Universidade Federal de Santa Maria
dc.source.none.fl_str_mv Ciência Rural v.49 n.7 2019
reponame:Ciência Rural
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Ciência Rural
collection Ciência Rural
repository.name.fl_str_mv
repository.mail.fl_str_mv
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