GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION

Detalhes bibliográficos
Autor(a) principal: Giustina, Luana Della
Data de Publicação: 2017
Outros Autores: Rossi, Ana Aparecida Bandini, Vieira, Felipe Sakamoto, Tardin, Flávio Dessaune, Neves, Leonarda Grillo, Pereira, Telma Nair Santana
Tipo de documento: Artigo
Idioma: por
Título da fonte: Ciência Florestal (Online)
DOI: 10.5902/1980509829894
Texto Completo: https://periodicos.ufsm.br/cienciaflorestal/article/view/29894
Resumo: The aim of this work was to evaluate 50 genotypes of teak based on molecular markers ISSR. Among the genotypes studied, 12 were candidate trees, 36 were surrounding the candidates and 02 trees were considered superior based on the phenotype, according to the assessment of the producers. These genotypes were propagated through seminal via and are 10 to 12 years old in the field. For this study, young and expanded leaves of each genotype were collected in the field. Total DNA was extracted and the amplifications were made by PCR with 12 primers ISSR, previously selected. The samples were applied in agarose gel 1.5% and subjected to electrophoresis running. For visualization of the amplified products, the gel was stained with ethidium bromide and photodocumented in UV transilluminator. Data were analyzed using the program POPGENE 1.31 and diversity parameters were estimated. Dissimilarity analyzes were estimated by Jaccard Index and the dendrogram construction was made based on the UPGMA method. At the same time, the phenotypic analysis of morphological data regarding the candidate trees was conducted by multicategorical analysis. All analyzes were performed with the assistance of Genes Program. The 12 primers amplified 56 fragments. For polymorphic information content the indicators UBC 841, UBC 857 and UBC 807 provided higher values, 0.329, 0.327 and 0.303, respectively. The genetic diversity of the candidate trees (H = 0.1601 and I = 0.2301) was similar to the neighbors (H = 0.1507, I = 0.2178). The dendrogram generated by the UPGMA method formed 14 groups, while the grouping based on Tocher, 15 groups were formed. For the phenotypic analysis, the variable that most contributes to the diversity was the formation of catana. These results reflect that there is variability among the genotypes. It is possible to note, therefore, the need to expand the variability of the material, by introducing genotypes of different origins and genetically unrelated.
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spelling GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATIONVARIABILIDADE GENÉTICA EM GENÓTIPOS DE TECA (Tectona grandis Linn. F.) BASEADA EM MARCADORES MOLECULARES ISSR E CARACTERES MORFOLÓGICOSgenetic diversitygermplasmbreeding.diversidade genéticagermoplasmamelhoramento genético.The aim of this work was to evaluate 50 genotypes of teak based on molecular markers ISSR. Among the genotypes studied, 12 were candidate trees, 36 were surrounding the candidates and 02 trees were considered superior based on the phenotype, according to the assessment of the producers. These genotypes were propagated through seminal via and are 10 to 12 years old in the field. For this study, young and expanded leaves of each genotype were collected in the field. Total DNA was extracted and the amplifications were made by PCR with 12 primers ISSR, previously selected. The samples were applied in agarose gel 1.5% and subjected to electrophoresis running. For visualization of the amplified products, the gel was stained with ethidium bromide and photodocumented in UV transilluminator. Data were analyzed using the program POPGENE 1.31 and diversity parameters were estimated. Dissimilarity analyzes were estimated by Jaccard Index and the dendrogram construction was made based on the UPGMA method. At the same time, the phenotypic analysis of morphological data regarding the candidate trees was conducted by multicategorical analysis. All analyzes were performed with the assistance of Genes Program. The 12 primers amplified 56 fragments. For polymorphic information content the indicators UBC 841, UBC 857 and UBC 807 provided higher values, 0.329, 0.327 and 0.303, respectively. The genetic diversity of the candidate trees (H = 0.1601 and I = 0.2301) was similar to the neighbors (H = 0.1507, I = 0.2178). The dendrogram generated by the UPGMA method formed 14 groups, while the grouping based on Tocher, 15 groups were formed. For the phenotypic analysis, the variable that most contributes to the diversity was the formation of catana. These results reflect that there is variability among the genotypes. It is possible to note, therefore, the need to expand the variability of the material, by introducing genotypes of different origins and genetically unrelated.O objetivo deste estudo foi avaliar 50 genótipos de teca com base em marcadores moleculares ISSR. Dentre os genótipos estudados, 12 eram árvores candidatas, 36 vizinhas às candidatas e 02 árvores consideradas superiores com base no fenótipo, segundo a avaliação dos produtores. Esses genótipos foram propagados via seminal e possuem de 10 a 12 anos em campo. Para tal estudo foram coletadas em campo folhas jovens e expandidas de cada genótipo. O DNA total foi extraído e as amplificações foram feitas via PCR com 12 primers ISSR, previamente selecionados. As amostras foram aplicadas em gel de agarose 1,5% e submetidas à corrida de eletroforese. Para visualização dos produtos amplificados, o gel foi corado com brometo de etídeo e fotodocumentados em transiluminador UV. Os dados foram analisados utilizando-se o programa POPGENE 1.31 e os parâmetros de diversidade foram estimados. As análises de dissimilaridade foram estimadas pelo Índice de Jaccard e a construção do dendrograma foi feita com base no método UPGMA. Paralelamente, foi realizada a análise fenotípica de dados morfológicos referentes às árvores candidatas pela análise multicategórica. Todas as análises foram realizadas com auxílio do Programa Genes. Os 12 primers amplificaram 56 fragmentos. Para o índice de conteúdos polimórfico, os iniciadores UBC 841, UBC 857 e UBC 807 proporcionaram maiores valores, 0,329, 0,327 e 0,303, respectivamente. A diversidade genética das árvores candidatas (H = 0,1601 e I = 0,2301) foi similar à das vizinhas (H = 0,1507; I = 0,2178). O dendrograma gerado pelo método UPGMA formou 14 grupos, enquanto que no agrupamento com base em Tocher, 15 grupos foram formados. Quanto à análise fenotípica, a variável que mais contribuiu para a diversidade foi a formação de catana. Esses resultados refletem que há variabilidade entre os genótipos. Nota-se, portanto, a necessidade da ampliação da variabilidade do material, através da introdução de genótipos de diferentes procedências e não relacionados geneticamente.Universidade Federal de Santa Maria2017-12-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.ufsm.br/cienciaflorestal/article/view/2989410.5902/1980509829894Ciência Florestal; Vol. 27 No. 4 (2017); 1311-1324Ciência Florestal; v. 27 n. 4 (2017); 1311-13241980-50980103-9954reponame:Ciência Florestal (Online)instname:Universidade Federal de Santa Maria (UFSM)instacron:UFSMporhttps://periodicos.ufsm.br/cienciaflorestal/article/view/29894/pdfCopyright (c) 2017 Ciência Florestalinfo:eu-repo/semantics/openAccessGiustina, Luana DellaRossi, Ana Aparecida BandiniVieira, Felipe SakamotoTardin, Flávio DessauneNeves, Leonarda GrilloPereira, Telma Nair Santana2017-12-11T22:23:18Zoai:ojs.pkp.sfu.ca:article/29894Revistahttp://www.ufsm.br/cienciaflorestal/ONGhttps://old.scielo.br/oai/scielo-oai.php||cienciaflorestal@ufsm.br|| cienciaflorestal@gmail.com|| cf@smail.ufsm.br1980-50980103-9954opendoar:2017-12-11T22:23:18Ciência Florestal (Online) - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
VARIABILIDADE GENÉTICA EM GENÓTIPOS DE TECA (Tectona grandis Linn. F.) BASEADA EM MARCADORES MOLECULARES ISSR E CARACTERES MORFOLÓGICOS
title GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
spellingShingle GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
Giustina, Luana Della
genetic diversity
germplasm
breeding.
diversidade genética
germoplasma
melhoramento genético.
Giustina, Luana Della
genetic diversity
germplasm
breeding.
diversidade genética
germoplasma
melhoramento genético.
title_short GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
title_full GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
title_fullStr GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
title_full_unstemmed GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
title_sort GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
author Giustina, Luana Della
author_facet Giustina, Luana Della
Giustina, Luana Della
Rossi, Ana Aparecida Bandini
Vieira, Felipe Sakamoto
Tardin, Flávio Dessaune
Neves, Leonarda Grillo
Pereira, Telma Nair Santana
Rossi, Ana Aparecida Bandini
Vieira, Felipe Sakamoto
Tardin, Flávio Dessaune
Neves, Leonarda Grillo
Pereira, Telma Nair Santana
author_role author
author2 Rossi, Ana Aparecida Bandini
Vieira, Felipe Sakamoto
Tardin, Flávio Dessaune
Neves, Leonarda Grillo
Pereira, Telma Nair Santana
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Giustina, Luana Della
Rossi, Ana Aparecida Bandini
Vieira, Felipe Sakamoto
Tardin, Flávio Dessaune
Neves, Leonarda Grillo
Pereira, Telma Nair Santana
dc.subject.por.fl_str_mv genetic diversity
germplasm
breeding.
diversidade genética
germoplasma
melhoramento genético.
topic genetic diversity
germplasm
breeding.
diversidade genética
germoplasma
melhoramento genético.
description The aim of this work was to evaluate 50 genotypes of teak based on molecular markers ISSR. Among the genotypes studied, 12 were candidate trees, 36 were surrounding the candidates and 02 trees were considered superior based on the phenotype, according to the assessment of the producers. These genotypes were propagated through seminal via and are 10 to 12 years old in the field. For this study, young and expanded leaves of each genotype were collected in the field. Total DNA was extracted and the amplifications were made by PCR with 12 primers ISSR, previously selected. The samples were applied in agarose gel 1.5% and subjected to electrophoresis running. For visualization of the amplified products, the gel was stained with ethidium bromide and photodocumented in UV transilluminator. Data were analyzed using the program POPGENE 1.31 and diversity parameters were estimated. Dissimilarity analyzes were estimated by Jaccard Index and the dendrogram construction was made based on the UPGMA method. At the same time, the phenotypic analysis of morphological data regarding the candidate trees was conducted by multicategorical analysis. All analyzes were performed with the assistance of Genes Program. The 12 primers amplified 56 fragments. For polymorphic information content the indicators UBC 841, UBC 857 and UBC 807 provided higher values, 0.329, 0.327 and 0.303, respectively. The genetic diversity of the candidate trees (H = 0.1601 and I = 0.2301) was similar to the neighbors (H = 0.1507, I = 0.2178). The dendrogram generated by the UPGMA method formed 14 groups, while the grouping based on Tocher, 15 groups were formed. For the phenotypic analysis, the variable that most contributes to the diversity was the formation of catana. These results reflect that there is variability among the genotypes. It is possible to note, therefore, the need to expand the variability of the material, by introducing genotypes of different origins and genetically unrelated.
publishDate 2017
dc.date.none.fl_str_mv 2017-12-11
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://periodicos.ufsm.br/cienciaflorestal/article/view/29894
10.5902/1980509829894
url https://periodicos.ufsm.br/cienciaflorestal/article/view/29894
identifier_str_mv 10.5902/1980509829894
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://periodicos.ufsm.br/cienciaflorestal/article/view/29894/pdf
dc.rights.driver.fl_str_mv Copyright (c) 2017 Ciência Florestal
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2017 Ciência Florestal
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
publisher.none.fl_str_mv Universidade Federal de Santa Maria
dc.source.none.fl_str_mv Ciência Florestal; Vol. 27 No. 4 (2017); 1311-1324
Ciência Florestal; v. 27 n. 4 (2017); 1311-1324
1980-5098
0103-9954
reponame:Ciência Florestal (Online)
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Ciência Florestal (Online)
collection Ciência Florestal (Online)
repository.name.fl_str_mv Ciência Florestal (Online) - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv ||cienciaflorestal@ufsm.br|| cienciaflorestal@gmail.com|| cf@smail.ufsm.br
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dc.identifier.doi.none.fl_str_mv 10.5902/1980509829894