GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Ciência Florestal (Online) |
DOI: | 10.5902/1980509829894 |
Texto Completo: | https://periodicos.ufsm.br/cienciaflorestal/article/view/29894 |
Resumo: | The aim of this work was to evaluate 50 genotypes of teak based on molecular markers ISSR. Among the genotypes studied, 12 were candidate trees, 36 were surrounding the candidates and 02 trees were considered superior based on the phenotype, according to the assessment of the producers. These genotypes were propagated through seminal via and are 10 to 12 years old in the field. For this study, young and expanded leaves of each genotype were collected in the field. Total DNA was extracted and the amplifications were made by PCR with 12 primers ISSR, previously selected. The samples were applied in agarose gel 1.5% and subjected to electrophoresis running. For visualization of the amplified products, the gel was stained with ethidium bromide and photodocumented in UV transilluminator. Data were analyzed using the program POPGENE 1.31 and diversity parameters were estimated. Dissimilarity analyzes were estimated by Jaccard Index and the dendrogram construction was made based on the UPGMA method. At the same time, the phenotypic analysis of morphological data regarding the candidate trees was conducted by multicategorical analysis. All analyzes were performed with the assistance of Genes Program. The 12 primers amplified 56 fragments. For polymorphic information content the indicators UBC 841, UBC 857 and UBC 807 provided higher values, 0.329, 0.327 and 0.303, respectively. The genetic diversity of the candidate trees (H = 0.1601 and I = 0.2301) was similar to the neighbors (H = 0.1507, I = 0.2178). The dendrogram generated by the UPGMA method formed 14 groups, while the grouping based on Tocher, 15 groups were formed. For the phenotypic analysis, the variable that most contributes to the diversity was the formation of catana. These results reflect that there is variability among the genotypes. It is possible to note, therefore, the need to expand the variability of the material, by introducing genotypes of different origins and genetically unrelated. |
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GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATIONVARIABILIDADE GENÉTICA EM GENÓTIPOS DE TECA (Tectona grandis Linn. F.) BASEADA EM MARCADORES MOLECULARES ISSR E CARACTERES MORFOLÓGICOSgenetic diversitygermplasmbreeding.diversidade genéticagermoplasmamelhoramento genético.The aim of this work was to evaluate 50 genotypes of teak based on molecular markers ISSR. Among the genotypes studied, 12 were candidate trees, 36 were surrounding the candidates and 02 trees were considered superior based on the phenotype, according to the assessment of the producers. These genotypes were propagated through seminal via and are 10 to 12 years old in the field. For this study, young and expanded leaves of each genotype were collected in the field. Total DNA was extracted and the amplifications were made by PCR with 12 primers ISSR, previously selected. The samples were applied in agarose gel 1.5% and subjected to electrophoresis running. For visualization of the amplified products, the gel was stained with ethidium bromide and photodocumented in UV transilluminator. Data were analyzed using the program POPGENE 1.31 and diversity parameters were estimated. Dissimilarity analyzes were estimated by Jaccard Index and the dendrogram construction was made based on the UPGMA method. At the same time, the phenotypic analysis of morphological data regarding the candidate trees was conducted by multicategorical analysis. All analyzes were performed with the assistance of Genes Program. The 12 primers amplified 56 fragments. For polymorphic information content the indicators UBC 841, UBC 857 and UBC 807 provided higher values, 0.329, 0.327 and 0.303, respectively. The genetic diversity of the candidate trees (H = 0.1601 and I = 0.2301) was similar to the neighbors (H = 0.1507, I = 0.2178). The dendrogram generated by the UPGMA method formed 14 groups, while the grouping based on Tocher, 15 groups were formed. For the phenotypic analysis, the variable that most contributes to the diversity was the formation of catana. These results reflect that there is variability among the genotypes. It is possible to note, therefore, the need to expand the variability of the material, by introducing genotypes of different origins and genetically unrelated.O objetivo deste estudo foi avaliar 50 genótipos de teca com base em marcadores moleculares ISSR. Dentre os genótipos estudados, 12 eram árvores candidatas, 36 vizinhas às candidatas e 02 árvores consideradas superiores com base no fenótipo, segundo a avaliação dos produtores. Esses genótipos foram propagados via seminal e possuem de 10 a 12 anos em campo. Para tal estudo foram coletadas em campo folhas jovens e expandidas de cada genótipo. O DNA total foi extraído e as amplificações foram feitas via PCR com 12 primers ISSR, previamente selecionados. As amostras foram aplicadas em gel de agarose 1,5% e submetidas à corrida de eletroforese. Para visualização dos produtos amplificados, o gel foi corado com brometo de etídeo e fotodocumentados em transiluminador UV. Os dados foram analisados utilizando-se o programa POPGENE 1.31 e os parâmetros de diversidade foram estimados. As análises de dissimilaridade foram estimadas pelo Índice de Jaccard e a construção do dendrograma foi feita com base no método UPGMA. Paralelamente, foi realizada a análise fenotípica de dados morfológicos referentes às árvores candidatas pela análise multicategórica. Todas as análises foram realizadas com auxílio do Programa Genes. Os 12 primers amplificaram 56 fragmentos. Para o índice de conteúdos polimórfico, os iniciadores UBC 841, UBC 857 e UBC 807 proporcionaram maiores valores, 0,329, 0,327 e 0,303, respectivamente. A diversidade genética das árvores candidatas (H = 0,1601 e I = 0,2301) foi similar à das vizinhas (H = 0,1507; I = 0,2178). O dendrograma gerado pelo método UPGMA formou 14 grupos, enquanto que no agrupamento com base em Tocher, 15 grupos foram formados. Quanto à análise fenotípica, a variável que mais contribuiu para a diversidade foi a formação de catana. Esses resultados refletem que há variabilidade entre os genótipos. Nota-se, portanto, a necessidade da ampliação da variabilidade do material, através da introdução de genótipos de diferentes procedências e não relacionados geneticamente.Universidade Federal de Santa Maria2017-12-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.ufsm.br/cienciaflorestal/article/view/2989410.5902/1980509829894Ciência Florestal; Vol. 27 No. 4 (2017); 1311-1324Ciência Florestal; v. 27 n. 4 (2017); 1311-13241980-50980103-9954reponame:Ciência Florestal (Online)instname:Universidade Federal de Santa Maria (UFSM)instacron:UFSMporhttps://periodicos.ufsm.br/cienciaflorestal/article/view/29894/pdfCopyright (c) 2017 Ciência Florestalinfo:eu-repo/semantics/openAccessGiustina, Luana DellaRossi, Ana Aparecida BandiniVieira, Felipe SakamotoTardin, Flávio DessauneNeves, Leonarda GrilloPereira, Telma Nair Santana2017-12-11T22:23:18Zoai:ojs.pkp.sfu.ca:article/29894Revistahttp://www.ufsm.br/cienciaflorestal/ONGhttps://old.scielo.br/oai/scielo-oai.php||cienciaflorestal@ufsm.br|| cienciaflorestal@gmail.com|| cf@smail.ufsm.br1980-50980103-9954opendoar:2017-12-11T22:23:18Ciência Florestal (Online) - Universidade Federal de Santa Maria (UFSM)false |
dc.title.none.fl_str_mv |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION VARIABILIDADE GENÉTICA EM GENÓTIPOS DE TECA (Tectona grandis Linn. F.) BASEADA EM MARCADORES MOLECULARES ISSR E CARACTERES MORFOLÓGICOS |
title |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION |
spellingShingle |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION Giustina, Luana Della genetic diversity germplasm breeding. diversidade genética germoplasma melhoramento genético. Giustina, Luana Della genetic diversity germplasm breeding. diversidade genética germoplasma melhoramento genético. |
title_short |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION |
title_full |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION |
title_fullStr |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION |
title_full_unstemmed |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION |
title_sort |
GENETIC VARIABILITY OF TEAK (Tectona grandis Linn. F.) BASED ON ISSR MOLECULAR MARKERS AND MORPHOLOGICAL CHARACTERIZATION |
author |
Giustina, Luana Della |
author_facet |
Giustina, Luana Della Giustina, Luana Della Rossi, Ana Aparecida Bandini Vieira, Felipe Sakamoto Tardin, Flávio Dessaune Neves, Leonarda Grillo Pereira, Telma Nair Santana Rossi, Ana Aparecida Bandini Vieira, Felipe Sakamoto Tardin, Flávio Dessaune Neves, Leonarda Grillo Pereira, Telma Nair Santana |
author_role |
author |
author2 |
Rossi, Ana Aparecida Bandini Vieira, Felipe Sakamoto Tardin, Flávio Dessaune Neves, Leonarda Grillo Pereira, Telma Nair Santana |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Giustina, Luana Della Rossi, Ana Aparecida Bandini Vieira, Felipe Sakamoto Tardin, Flávio Dessaune Neves, Leonarda Grillo Pereira, Telma Nair Santana |
dc.subject.por.fl_str_mv |
genetic diversity germplasm breeding. diversidade genética germoplasma melhoramento genético. |
topic |
genetic diversity germplasm breeding. diversidade genética germoplasma melhoramento genético. |
description |
The aim of this work was to evaluate 50 genotypes of teak based on molecular markers ISSR. Among the genotypes studied, 12 were candidate trees, 36 were surrounding the candidates and 02 trees were considered superior based on the phenotype, according to the assessment of the producers. These genotypes were propagated through seminal via and are 10 to 12 years old in the field. For this study, young and expanded leaves of each genotype were collected in the field. Total DNA was extracted and the amplifications were made by PCR with 12 primers ISSR, previously selected. The samples were applied in agarose gel 1.5% and subjected to electrophoresis running. For visualization of the amplified products, the gel was stained with ethidium bromide and photodocumented in UV transilluminator. Data were analyzed using the program POPGENE 1.31 and diversity parameters were estimated. Dissimilarity analyzes were estimated by Jaccard Index and the dendrogram construction was made based on the UPGMA method. At the same time, the phenotypic analysis of morphological data regarding the candidate trees was conducted by multicategorical analysis. All analyzes were performed with the assistance of Genes Program. The 12 primers amplified 56 fragments. For polymorphic information content the indicators UBC 841, UBC 857 and UBC 807 provided higher values, 0.329, 0.327 and 0.303, respectively. The genetic diversity of the candidate trees (H = 0.1601 and I = 0.2301) was similar to the neighbors (H = 0.1507, I = 0.2178). The dendrogram generated by the UPGMA method formed 14 groups, while the grouping based on Tocher, 15 groups were formed. For the phenotypic analysis, the variable that most contributes to the diversity was the formation of catana. These results reflect that there is variability among the genotypes. It is possible to note, therefore, the need to expand the variability of the material, by introducing genotypes of different origins and genetically unrelated. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-12-11 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://periodicos.ufsm.br/cienciaflorestal/article/view/29894 10.5902/1980509829894 |
url |
https://periodicos.ufsm.br/cienciaflorestal/article/view/29894 |
identifier_str_mv |
10.5902/1980509829894 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
https://periodicos.ufsm.br/cienciaflorestal/article/view/29894/pdf |
dc.rights.driver.fl_str_mv |
Copyright (c) 2017 Ciência Florestal info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2017 Ciência Florestal |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Santa Maria |
publisher.none.fl_str_mv |
Universidade Federal de Santa Maria |
dc.source.none.fl_str_mv |
Ciência Florestal; Vol. 27 No. 4 (2017); 1311-1324 Ciência Florestal; v. 27 n. 4 (2017); 1311-1324 1980-5098 0103-9954 reponame:Ciência Florestal (Online) instname:Universidade Federal de Santa Maria (UFSM) instacron:UFSM |
instname_str |
Universidade Federal de Santa Maria (UFSM) |
instacron_str |
UFSM |
institution |
UFSM |
reponame_str |
Ciência Florestal (Online) |
collection |
Ciência Florestal (Online) |
repository.name.fl_str_mv |
Ciência Florestal (Online) - Universidade Federal de Santa Maria (UFSM) |
repository.mail.fl_str_mv |
||cienciaflorestal@ufsm.br|| cienciaflorestal@gmail.com|| cf@smail.ufsm.br |
_version_ |
1822180858104119296 |
dc.identifier.doi.none.fl_str_mv |
10.5902/1980509829894 |