Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã

Detalhes bibliográficos
Autor(a) principal: Walker, Clair
Data de Publicação: 2016
Tipo de documento: Tese
Idioma: por
Título da fonte: Manancial - Repositório Digital da UFSM
dARK ID: ark:/26339/001300000433x
Texto Completo: http://repositorio.ufsm.br/handle/1/3791
Resumo: The culture of pecan [Carya illinoinensis (Wangenh.) K. Koch] has presented greater economic importance in southern Brazil in recent decades, thus increasing the planted area, mainly in the states of Rio Grande do Sul (RS), Santa Catarina (SC) and Paraná (PR). However, despite the increasing growth of planted area, little research related to diseases in culture and breeding aimed at obtaining cultivars resistant to diseases, have been held in the country. The occurrence of leaf spot symptoms caused by Cladosporium spp. was observed in field in three southern states of Brazil. Given this observation, the general objective of this study was to evaluate the morphological and molecular variability of Cladosporium spp. isolates associated with leaf spot in pecan, checking its distribution in southern Brazil, as well as selecting resistant cultivars as a way to control the disease. The specific objectives were established as follows: a) To identify the species of Cladosporium spp. causing leaf spot in pecan orchards coming from producing areas of the three southern states of Brazil; b) To verify the diversity and morphological and genetic variability, by sequencing elongation factor (TEF - 1α) region, isolates of Cladosporium spp. from pecan plants with symptoms of leaf spot; c) To select efficient morphological characters for separation of isolated groups according to the species to which they belong; d) To confirm the pathogenicity of Cladosporium spp., as well as quantify the incidence and severity of leaf spot in Shawnee‟ and Barton‟ cultivars. For this, leaf samples were taken in 16 symptomatic pecan orchards to the isolation of the pathogen in the states of Paraná, Santa Catarina and Rio Grande do Sul. The isolates were characterized morphologically using mycelial growth, sporulation, colonies pigmentation, conidia and ramoconidia dimensions. These variables were used in the UPGMA analysis in which the isolates were grouped in a dendrogram according to genetic similarity and established characters that contributed most to the divergence. The analysis of 40 isolates by means of morphological and genetic analysis, sequencing of genes from the elongation factor TEF-1α confirmed that the species C. cladosporioides (21 isolates), C. pseudocladosporioides (18 isolates) and C. subuliforme (only one isolate) associated with leaf spot. The region of the elongation factor (TEF-1α) is efficient to identify and group the species associated with pecan included in the C. cladosporioides complex and sporulation is an important morphological characteristic to differentiate the species of Cladosporium spp. All 40 isolates were pathogenic to cultivars Barton‟ and Shawnee‟. The two cultivars were considered susceptible to leaf spot for the three species of Cladosporium spp. tested and there is susceptibility difference for C. pseudocladosporioides, where 'Shawnee' showed greater severity of disease in relation to 'Barton'.
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spelling Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecãIdentification of Cladosporium spp. species and reaction of pecan cultivarsCarya illinoinensisMancha foliarSarnaTEF-1αCarya illinoinensisLeaf spotScabCNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTALThe culture of pecan [Carya illinoinensis (Wangenh.) K. Koch] has presented greater economic importance in southern Brazil in recent decades, thus increasing the planted area, mainly in the states of Rio Grande do Sul (RS), Santa Catarina (SC) and Paraná (PR). However, despite the increasing growth of planted area, little research related to diseases in culture and breeding aimed at obtaining cultivars resistant to diseases, have been held in the country. The occurrence of leaf spot symptoms caused by Cladosporium spp. was observed in field in three southern states of Brazil. Given this observation, the general objective of this study was to evaluate the morphological and molecular variability of Cladosporium spp. isolates associated with leaf spot in pecan, checking its distribution in southern Brazil, as well as selecting resistant cultivars as a way to control the disease. The specific objectives were established as follows: a) To identify the species of Cladosporium spp. causing leaf spot in pecan orchards coming from producing areas of the three southern states of Brazil; b) To verify the diversity and morphological and genetic variability, by sequencing elongation factor (TEF - 1α) region, isolates of Cladosporium spp. from pecan plants with symptoms of leaf spot; c) To select efficient morphological characters for separation of isolated groups according to the species to which they belong; d) To confirm the pathogenicity of Cladosporium spp., as well as quantify the incidence and severity of leaf spot in Shawnee‟ and Barton‟ cultivars. For this, leaf samples were taken in 16 symptomatic pecan orchards to the isolation of the pathogen in the states of Paraná, Santa Catarina and Rio Grande do Sul. The isolates were characterized morphologically using mycelial growth, sporulation, colonies pigmentation, conidia and ramoconidia dimensions. These variables were used in the UPGMA analysis in which the isolates were grouped in a dendrogram according to genetic similarity and established characters that contributed most to the divergence. The analysis of 40 isolates by means of morphological and genetic analysis, sequencing of genes from the elongation factor TEF-1α confirmed that the species C. cladosporioides (21 isolates), C. pseudocladosporioides (18 isolates) and C. subuliforme (only one isolate) associated with leaf spot. The region of the elongation factor (TEF-1α) is efficient to identify and group the species associated with pecan included in the C. cladosporioides complex and sporulation is an important morphological characteristic to differentiate the species of Cladosporium spp. All 40 isolates were pathogenic to cultivars Barton‟ and Shawnee‟. The two cultivars were considered susceptible to leaf spot for the three species of Cladosporium spp. tested and there is susceptibility difference for C. pseudocladosporioides, where 'Shawnee' showed greater severity of disease in relation to 'Barton'.Conselho Nacional de Desenvolvimento Científico e TecnológicoA cultura da nogueira-pecã [Carya illinoinensis (Wangenh.) K. Koch] tem apresentado maior importância econômica no sul do Brasil nas últimas décadas, aumentando assim a área plantada, principalmente nos estados do Rio Grande do Sul (RS), Santa Catarina (SC) e Paraná (PR). No entanto, apesar do aumento crescente das áreas plantadas, poucas pesquisas relacionadas a doenças na cultura e ao melhoramento genético visando a obtenção de cultivares resistentes a doenças, têm sido realizadas no país. A ocorrência de sintomas de mancha foliar causada por Cladosporium spp. foi observada a campo nos três estados do sul do Brasil. Diante dessa observação, o objetivo geral do presente trabalho foi verificar a variabilidade morfológica e molecular de isolados de Cladosporium spp. associados à mancha foliar em nogueira-pecã, verificando sua distribuição na região sul do Brasil, bem como selecionar cultivares resistentes como forma de controle para a doença. Como objetivos específicos foram estabelecidos os seguintes: a) identificar as espécies de Cladosporium causadoras de mancha foliar em pomares de nogueira-pecã procedentes de regiões produtoras dos três estados do sul do Brasil; b) verificar a diversidade e a variabilidade morfológica e genética, através do sequenciamento da região do fator de elongação (TEF 1α), de isolados de Cladosporium spp. provenientes de plantas de nogueira-pecã com sintomas de mancha foliar; c) selecionar caracteres morfológicos eficientes para a separação dos isolados em grupos, de acordo com a espécie a que pertencem; d) confirmar a patogenicidade de isolados de Cladosporium spp., bem como quantificar a incidência e severidade da mancha foliar nas cultivares Barton‟ e Shawnee‟. Para isso, foram realizadas coletas de folhas sintomáticas em 16 pomares de nogueira-pecã para o isolamento do patógeno, nos estados do PR, SC e RS. Os isolados foram caracterizados morfologicamente através do crescimento micelial, esporulação, pigmentação das colônias, dimensões de conídios e ramoconídios. Essas variáveis foram utilizadas na análise UPGMA em que os isolados foram agrupados em um dendrograma de acordo com a similaridade genética e, estabelecidos os caracteres que mais contribuíram para a divergência. A análise dos 40 isolados através das características morfológicas e da análise genética, a partir do sequenciamento dos genes do fator de elongação TEF-1α, confirmaram as espécies C. cladosporioides (21 isolados), C. pseudocladosporioides (18 isolados) e C. subuliforme (apenas um isolado) associadas à mancha foliar. A região do fator de elongação (TEF-1α) é eficiente para identificar e agrupar as espécies associadas à nogueira-pecã incluídas no complexo C. cladosporioides e a esporulação é uma importante característica morfológica para diferenciar as espécies de Cladosporium spp. Todos os 40 isolados foram patogênicos às cultivares Barton‟ e Shawnee‟. As duas cultivares foram consideradas suscetíveis à mancha foliar para as três espécies de Cladosporium spp. testadas e existe diferença de suscetibilidade para C. pseudocladosporioides, onde a Shawnee‟ apresentou maior severidade da doença em relação a Barton‟.Universidade Federal de Santa MariaBRRecursos Florestais e Engenharia FlorestalUFSMPrograma de Pós-Graduação em Engenharia FlorestalMuniz, Marlove Fatima Briãohttp://lattes.cnpq.br/3148312031889388Lazarotto, Maríliahttp://lattes.cnpq.br/1310246210091310Reiniger, Lia Rejane Silveirahttp://lattes.cnpq.br/5739294882585391Manfio, Candida Elisahttp://lattes.cnpq.br/6570565388743681Steffen, Gerusa Pauli Kisthttp://lattes.cnpq.br/6467625663365353Walker, Clair2016-07-192016-07-192016-02-23info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfapplication/pdfWALKER, Clair. Identification of Cladosporium spp. species and reaction of pecan cultivars. 2016. 58 f. Tese (Doutorado em Recursos Florestais e Engenharia Florestal) - Universidade Federal de Santa Maria, Santa Maria, 2016.http://repositorio.ufsm.br/handle/1/3791ark:/26339/001300000433xporinfo:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2022-07-12T19:00:22Zoai:repositorio.ufsm.br:1/3791Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2022-07-12T19:00:22Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
Identification of Cladosporium spp. species and reaction of pecan cultivars
title Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
spellingShingle Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
Walker, Clair
Carya illinoinensis
Mancha foliar
Sarna
TEF-1α
Carya illinoinensis
Leaf spot
Scab
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL
title_short Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
title_full Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
title_fullStr Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
title_full_unstemmed Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
title_sort Identificação de espécies de Cladosporium e a reação de cultivares de nogueira-pecã
author Walker, Clair
author_facet Walker, Clair
author_role author
dc.contributor.none.fl_str_mv Muniz, Marlove Fatima Brião
http://lattes.cnpq.br/3148312031889388
Lazarotto, Marília
http://lattes.cnpq.br/1310246210091310
Reiniger, Lia Rejane Silveira
http://lattes.cnpq.br/5739294882585391
Manfio, Candida Elisa
http://lattes.cnpq.br/6570565388743681
Steffen, Gerusa Pauli Kist
http://lattes.cnpq.br/6467625663365353
dc.contributor.author.fl_str_mv Walker, Clair
dc.subject.por.fl_str_mv Carya illinoinensis
Mancha foliar
Sarna
TEF-1α
Carya illinoinensis
Leaf spot
Scab
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL
topic Carya illinoinensis
Mancha foliar
Sarna
TEF-1α
Carya illinoinensis
Leaf spot
Scab
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL
description The culture of pecan [Carya illinoinensis (Wangenh.) K. Koch] has presented greater economic importance in southern Brazil in recent decades, thus increasing the planted area, mainly in the states of Rio Grande do Sul (RS), Santa Catarina (SC) and Paraná (PR). However, despite the increasing growth of planted area, little research related to diseases in culture and breeding aimed at obtaining cultivars resistant to diseases, have been held in the country. The occurrence of leaf spot symptoms caused by Cladosporium spp. was observed in field in three southern states of Brazil. Given this observation, the general objective of this study was to evaluate the morphological and molecular variability of Cladosporium spp. isolates associated with leaf spot in pecan, checking its distribution in southern Brazil, as well as selecting resistant cultivars as a way to control the disease. The specific objectives were established as follows: a) To identify the species of Cladosporium spp. causing leaf spot in pecan orchards coming from producing areas of the three southern states of Brazil; b) To verify the diversity and morphological and genetic variability, by sequencing elongation factor (TEF - 1α) region, isolates of Cladosporium spp. from pecan plants with symptoms of leaf spot; c) To select efficient morphological characters for separation of isolated groups according to the species to which they belong; d) To confirm the pathogenicity of Cladosporium spp., as well as quantify the incidence and severity of leaf spot in Shawnee‟ and Barton‟ cultivars. For this, leaf samples were taken in 16 symptomatic pecan orchards to the isolation of the pathogen in the states of Paraná, Santa Catarina and Rio Grande do Sul. The isolates were characterized morphologically using mycelial growth, sporulation, colonies pigmentation, conidia and ramoconidia dimensions. These variables were used in the UPGMA analysis in which the isolates were grouped in a dendrogram according to genetic similarity and established characters that contributed most to the divergence. The analysis of 40 isolates by means of morphological and genetic analysis, sequencing of genes from the elongation factor TEF-1α confirmed that the species C. cladosporioides (21 isolates), C. pseudocladosporioides (18 isolates) and C. subuliforme (only one isolate) associated with leaf spot. The region of the elongation factor (TEF-1α) is efficient to identify and group the species associated with pecan included in the C. cladosporioides complex and sporulation is an important morphological characteristic to differentiate the species of Cladosporium spp. All 40 isolates were pathogenic to cultivars Barton‟ and Shawnee‟. The two cultivars were considered susceptible to leaf spot for the three species of Cladosporium spp. tested and there is susceptibility difference for C. pseudocladosporioides, where 'Shawnee' showed greater severity of disease in relation to 'Barton'.
publishDate 2016
dc.date.none.fl_str_mv 2016-07-19
2016-07-19
2016-02-23
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv WALKER, Clair. Identification of Cladosporium spp. species and reaction of pecan cultivars. 2016. 58 f. Tese (Doutorado em Recursos Florestais e Engenharia Florestal) - Universidade Federal de Santa Maria, Santa Maria, 2016.
http://repositorio.ufsm.br/handle/1/3791
dc.identifier.dark.fl_str_mv ark:/26339/001300000433x
identifier_str_mv WALKER, Clair. Identification of Cladosporium spp. species and reaction of pecan cultivars. 2016. 58 f. Tese (Doutorado em Recursos Florestais e Engenharia Florestal) - Universidade Federal de Santa Maria, Santa Maria, 2016.
ark:/26339/001300000433x
url http://repositorio.ufsm.br/handle/1/3791
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language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
BR
Recursos Florestais e Engenharia Florestal
UFSM
Programa de Pós-Graduação em Engenharia Florestal
publisher.none.fl_str_mv Universidade Federal de Santa Maria
BR
Recursos Florestais e Engenharia Florestal
UFSM
Programa de Pós-Graduação em Engenharia Florestal
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com
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