A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1186/1476-072X-10-17 http://repositorio.unifesp.br/handle/11600/33477 |
Resumo: | Background: Population antimicrobial use may influence resistance emergence. Resistance is an ecological phenomenon due to potential transmissibility. We investigated spatial and temporal patterns of ciprofloxacin (CIP) population consumption related to E. coli resistance emergence and dissemination in a major Brazilian city. A total of 4,372 urinary tract infection E. coli cases, with 723 CIP resistant, were identified in 2002 from two outpatient centres. Cases were address geocoded in a digital map. Raw CIP consumption data was transformed into usage density in DDDs by CIP selling points influence zones determination. A stochastic model coupled with a Geographical Information System was applied for relating resistance and usage density and for detecting city areas of high/low resistance risk.Results: E. coli CIP resistant cluster emergence was detected and significantly related to usage density at a level of 5 to 9 CIP DDDs. There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density.Conclusions: There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density. the usage density of 5-9 CIP DDDs per 1,000 inhabitants within the same influence zone was the resistance triggering level. This level led to E. coli resistance clustering, proving that individual resistance emergence and dissemination was affected by antimicrobial population consumption. |
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spelling |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, BrasilBackground: Population antimicrobial use may influence resistance emergence. Resistance is an ecological phenomenon due to potential transmissibility. We investigated spatial and temporal patterns of ciprofloxacin (CIP) population consumption related to E. coli resistance emergence and dissemination in a major Brazilian city. A total of 4,372 urinary tract infection E. coli cases, with 723 CIP resistant, were identified in 2002 from two outpatient centres. Cases were address geocoded in a digital map. Raw CIP consumption data was transformed into usage density in DDDs by CIP selling points influence zones determination. A stochastic model coupled with a Geographical Information System was applied for relating resistance and usage density and for detecting city areas of high/low resistance risk.Results: E. coli CIP resistant cluster emergence was detected and significantly related to usage density at a level of 5 to 9 CIP DDDs. There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density.Conclusions: There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density. the usage density of 5-9 CIP DDDs per 1,000 inhabitants within the same influence zone was the resistance triggering level. This level led to E. coli resistance clustering, proving that individual resistance emergence and dissemination was affected by antimicrobial population consumption.Fed Univ São Paulo UNIFESP, Special Microbiol Lab, São Paulo, BrazilNatl Inst Space Res, Image Proc Div, Earth Observat Gen Coordinat, São Paulo, BrazilUniv Fed Parana, Stat & Geoinformat Lab, BR-80060000 Curitiba, Parana, BrazilUniv Exeter, Dept Math, Exeter EX4 4QE, Devon, EnglandGC 2 Pharmaceut Res & Dev Llc, São Paulo, BrazilFed Univ São Paulo UNIFESP, Special Microbiol Lab, São Paulo, BrazilWeb of ScienceBiomed Central LtdUniversidade Federal de São Paulo (UNIFESP)Natl Inst Space ResUniv Fed ParanaUniv ExeterGC 2 Pharmaceut Res & Dev LlcKiffer, Carlos R. V. [UNIFESP]Camargo, Eduardo C. G.Shimakura, Silvia E.Ribeiro, Paulo J.Bailey, Trevor C.Pignatari, Antonio C. C. [UNIFESP]Monteiro, Antonio M. V.2016-01-24T14:06:12Z2016-01-24T14:06:12Z2011-02-28info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion10application/pdfhttp://dx.doi.org/10.1186/1476-072X-10-17International Journal of Health Geographics. London: Biomed Central Ltd, v. 10, 10 p., 2011.10.1186/1476-072X-10-17WOS000288336300002.pdf1476-072Xhttp://repositorio.unifesp.br/handle/11600/33477WOS:000288336300002engInternational Journal of Health Geographicsinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-07-31T15:01:33Zoai:repositorio.unifesp.br/:11600/33477Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-07-31T15:01:33Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
title |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
spellingShingle |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil Kiffer, Carlos R. V. [UNIFESP] |
title_short |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
title_full |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
title_fullStr |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
title_full_unstemmed |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
title_sort |
A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil |
author |
Kiffer, Carlos R. V. [UNIFESP] |
author_facet |
Kiffer, Carlos R. V. [UNIFESP] Camargo, Eduardo C. G. Shimakura, Silvia E. Ribeiro, Paulo J. Bailey, Trevor C. Pignatari, Antonio C. C. [UNIFESP] Monteiro, Antonio M. V. |
author_role |
author |
author2 |
Camargo, Eduardo C. G. Shimakura, Silvia E. Ribeiro, Paulo J. Bailey, Trevor C. Pignatari, Antonio C. C. [UNIFESP] Monteiro, Antonio M. V. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Paulo (UNIFESP) Natl Inst Space Res Univ Fed Parana Univ Exeter GC 2 Pharmaceut Res & Dev Llc |
dc.contributor.author.fl_str_mv |
Kiffer, Carlos R. V. [UNIFESP] Camargo, Eduardo C. G. Shimakura, Silvia E. Ribeiro, Paulo J. Bailey, Trevor C. Pignatari, Antonio C. C. [UNIFESP] Monteiro, Antonio M. V. |
description |
Background: Population antimicrobial use may influence resistance emergence. Resistance is an ecological phenomenon due to potential transmissibility. We investigated spatial and temporal patterns of ciprofloxacin (CIP) population consumption related to E. coli resistance emergence and dissemination in a major Brazilian city. A total of 4,372 urinary tract infection E. coli cases, with 723 CIP resistant, were identified in 2002 from two outpatient centres. Cases were address geocoded in a digital map. Raw CIP consumption data was transformed into usage density in DDDs by CIP selling points influence zones determination. A stochastic model coupled with a Geographical Information System was applied for relating resistance and usage density and for detecting city areas of high/low resistance risk.Results: E. coli CIP resistant cluster emergence was detected and significantly related to usage density at a level of 5 to 9 CIP DDDs. There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density.Conclusions: There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density. the usage density of 5-9 CIP DDDs per 1,000 inhabitants within the same influence zone was the resistance triggering level. This level led to E. coli resistance clustering, proving that individual resistance emergence and dissemination was affected by antimicrobial population consumption. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-02-28 2016-01-24T14:06:12Z 2016-01-24T14:06:12Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1186/1476-072X-10-17 International Journal of Health Geographics. London: Biomed Central Ltd, v. 10, 10 p., 2011. 10.1186/1476-072X-10-17 WOS000288336300002.pdf 1476-072X http://repositorio.unifesp.br/handle/11600/33477 WOS:000288336300002 |
url |
http://dx.doi.org/10.1186/1476-072X-10-17 http://repositorio.unifesp.br/handle/11600/33477 |
identifier_str_mv |
International Journal of Health Geographics. London: Biomed Central Ltd, v. 10, 10 p., 2011. 10.1186/1476-072X-10-17 WOS000288336300002.pdf 1476-072X WOS:000288336300002 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
International Journal of Health Geographics |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
10 application/pdf |
dc.publisher.none.fl_str_mv |
Biomed Central Ltd |
publisher.none.fl_str_mv |
Biomed Central Ltd |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
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1814268454107086848 |