A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil

Detalhes bibliográficos
Autor(a) principal: Kiffer, Carlos R. V. [UNIFESP]
Data de Publicação: 2011
Outros Autores: Camargo, Eduardo C. G., Shimakura, Silvia E., Ribeiro, Paulo J., Bailey, Trevor C., Pignatari, Antonio C. C. [UNIFESP], Monteiro, Antonio M. V.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://dx.doi.org/10.1186/1476-072X-10-17
http://repositorio.unifesp.br/handle/11600/33477
Resumo: Background: Population antimicrobial use may influence resistance emergence. Resistance is an ecological phenomenon due to potential transmissibility. We investigated spatial and temporal patterns of ciprofloxacin (CIP) population consumption related to E. coli resistance emergence and dissemination in a major Brazilian city. A total of 4,372 urinary tract infection E. coli cases, with 723 CIP resistant, were identified in 2002 from two outpatient centres. Cases were address geocoded in a digital map. Raw CIP consumption data was transformed into usage density in DDDs by CIP selling points influence zones determination. A stochastic model coupled with a Geographical Information System was applied for relating resistance and usage density and for detecting city areas of high/low resistance risk.Results: E. coli CIP resistant cluster emergence was detected and significantly related to usage density at a level of 5 to 9 CIP DDDs. There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density.Conclusions: There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density. the usage density of 5-9 CIP DDDs per 1,000 inhabitants within the same influence zone was the resistance triggering level. This level led to E. coli resistance clustering, proving that individual resistance emergence and dissemination was affected by antimicrobial population consumption.
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spelling A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, BrasilBackground: Population antimicrobial use may influence resistance emergence. Resistance is an ecological phenomenon due to potential transmissibility. We investigated spatial and temporal patterns of ciprofloxacin (CIP) population consumption related to E. coli resistance emergence and dissemination in a major Brazilian city. A total of 4,372 urinary tract infection E. coli cases, with 723 CIP resistant, were identified in 2002 from two outpatient centres. Cases were address geocoded in a digital map. Raw CIP consumption data was transformed into usage density in DDDs by CIP selling points influence zones determination. A stochastic model coupled with a Geographical Information System was applied for relating resistance and usage density and for detecting city areas of high/low resistance risk.Results: E. coli CIP resistant cluster emergence was detected and significantly related to usage density at a level of 5 to 9 CIP DDDs. There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density.Conclusions: There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density. the usage density of 5-9 CIP DDDs per 1,000 inhabitants within the same influence zone was the resistance triggering level. This level led to E. coli resistance clustering, proving that individual resistance emergence and dissemination was affected by antimicrobial population consumption.Fed Univ São Paulo UNIFESP, Special Microbiol Lab, São Paulo, BrazilNatl Inst Space Res, Image Proc Div, Earth Observat Gen Coordinat, São Paulo, BrazilUniv Fed Parana, Stat & Geoinformat Lab, BR-80060000 Curitiba, Parana, BrazilUniv Exeter, Dept Math, Exeter EX4 4QE, Devon, EnglandGC 2 Pharmaceut Res & Dev Llc, São Paulo, BrazilFed Univ São Paulo UNIFESP, Special Microbiol Lab, São Paulo, BrazilWeb of ScienceBiomed Central LtdUniversidade Federal de São Paulo (UNIFESP)Natl Inst Space ResUniv Fed ParanaUniv ExeterGC 2 Pharmaceut Res & Dev LlcKiffer, Carlos R. V. [UNIFESP]Camargo, Eduardo C. G.Shimakura, Silvia E.Ribeiro, Paulo J.Bailey, Trevor C.Pignatari, Antonio C. C. [UNIFESP]Monteiro, Antonio M. V.2016-01-24T14:06:12Z2016-01-24T14:06:12Z2011-02-28info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion10application/pdfhttp://dx.doi.org/10.1186/1476-072X-10-17International Journal of Health Geographics. London: Biomed Central Ltd, v. 10, 10 p., 2011.10.1186/1476-072X-10-17WOS000288336300002.pdf1476-072Xhttp://repositorio.unifesp.br/handle/11600/33477WOS:000288336300002engInternational Journal of Health Geographicsinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-07-31T15:01:33Zoai:repositorio.unifesp.br/:11600/33477Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-07-31T15:01:33Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
title A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
spellingShingle A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
Kiffer, Carlos R. V. [UNIFESP]
title_short A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
title_full A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
title_fullStr A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
title_full_unstemmed A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
title_sort A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in São Paulo, Brasil
author Kiffer, Carlos R. V. [UNIFESP]
author_facet Kiffer, Carlos R. V. [UNIFESP]
Camargo, Eduardo C. G.
Shimakura, Silvia E.
Ribeiro, Paulo J.
Bailey, Trevor C.
Pignatari, Antonio C. C. [UNIFESP]
Monteiro, Antonio M. V.
author_role author
author2 Camargo, Eduardo C. G.
Shimakura, Silvia E.
Ribeiro, Paulo J.
Bailey, Trevor C.
Pignatari, Antonio C. C. [UNIFESP]
Monteiro, Antonio M. V.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Paulo (UNIFESP)
Natl Inst Space Res
Univ Fed Parana
Univ Exeter
GC 2 Pharmaceut Res & Dev Llc
dc.contributor.author.fl_str_mv Kiffer, Carlos R. V. [UNIFESP]
Camargo, Eduardo C. G.
Shimakura, Silvia E.
Ribeiro, Paulo J.
Bailey, Trevor C.
Pignatari, Antonio C. C. [UNIFESP]
Monteiro, Antonio M. V.
description Background: Population antimicrobial use may influence resistance emergence. Resistance is an ecological phenomenon due to potential transmissibility. We investigated spatial and temporal patterns of ciprofloxacin (CIP) population consumption related to E. coli resistance emergence and dissemination in a major Brazilian city. A total of 4,372 urinary tract infection E. coli cases, with 723 CIP resistant, were identified in 2002 from two outpatient centres. Cases were address geocoded in a digital map. Raw CIP consumption data was transformed into usage density in DDDs by CIP selling points influence zones determination. A stochastic model coupled with a Geographical Information System was applied for relating resistance and usage density and for detecting city areas of high/low resistance risk.Results: E. coli CIP resistant cluster emergence was detected and significantly related to usage density at a level of 5 to 9 CIP DDDs. There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density.Conclusions: There were clustered hot-spots and a significant global spatial variation in the residual resistance risk after allowing for usage density. the usage density of 5-9 CIP DDDs per 1,000 inhabitants within the same influence zone was the resistance triggering level. This level led to E. coli resistance clustering, proving that individual resistance emergence and dissemination was affected by antimicrobial population consumption.
publishDate 2011
dc.date.none.fl_str_mv 2011-02-28
2016-01-24T14:06:12Z
2016-01-24T14:06:12Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1186/1476-072X-10-17
International Journal of Health Geographics. London: Biomed Central Ltd, v. 10, 10 p., 2011.
10.1186/1476-072X-10-17
WOS000288336300002.pdf
1476-072X
http://repositorio.unifesp.br/handle/11600/33477
WOS:000288336300002
url http://dx.doi.org/10.1186/1476-072X-10-17
http://repositorio.unifesp.br/handle/11600/33477
identifier_str_mv International Journal of Health Geographics. London: Biomed Central Ltd, v. 10, 10 p., 2011.
10.1186/1476-072X-10-17
WOS000288336300002.pdf
1476-072X
WOS:000288336300002
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv International Journal of Health Geographics
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 10
application/pdf
dc.publisher.none.fl_str_mv Biomed Central Ltd
publisher.none.fl_str_mv Biomed Central Ltd
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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