Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1590/S1517-83822008000100005 http://repositorio.unifesp.br/handle/11600/30251 |
Resumo: | Group B streptococcus (GBS) remains the most common cause of early-onset sepsis in newborns. Laboratory gold-standard, broth culture methods are highly specific, but lack sensitivity. the aim of this study was to validate a nested-PCR and to determine whether residue volumes of urine samples obtained by non invasive, non sterile methods could be used to confirm neonatal GBS sepsis. the nested-PCR was performed with primers of the major GBS surface antigen. Unavailability of biological samples to perform life supporting exams, as well as others to elucidate the etiology of infections is a frequent problem concerning newborn patients. Nevertheless, we decided to include cases according to strict criteria: newborns had to present with signs and symptoms compatible with GBS infection; at least one of the following biological samples had to be sent for culture: blood, urine, or cerebrospinal fluid; availability of residue volumes of the samples sent for cultures, or of others collected on the day of hospitalization, prior to antibiotic therapy prescription, to be analyzed by PCR; favorable outcome after GBS empiric treatment. in only one newborn GBS infection was confirmed by cultures, while infection was only presumptive in the other three patients (they fulfilled inclusion criteria but were GBS-culture negative). From a total of 12 biological samples (5 blood, 3 CSF and 4 urine specimen), eight were tested by culture methods (2/8 were positive), and 8 were tested by PCR (7/8 were positive), and only 4 samples were simultaneously tested by both methods (1 positive by culture and 3 by PCR). in conclusion, although based on a restricted number of neonates and samples, our results suggest that the proposed nested-PCR might be used to diagnose GBS sepsis as it has successfully amplified the three types of biological samples analyzed (blood, urine and cerebrospinal fluid), and was more sensitive than culture methods as PCR in urine confirmed diagnosis in all four patients. Moreover, PCR has enabled us to use residue volumes of urine samples collected by non invasive, non sterile methods, what is technically adequate as GBS is not part of the normal urine flora, thus avoiding invasive procedures such as suprapubic bladder punction or transurethral catheterization. At the same time, the use of urine instead of blood samples could help preventing newborns blood spoliation. |
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Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samplesGBSneonatal sepsisearly-onset neonatal sepsisneonatal infectionPCRnested-PCRGroup B streptococcus (GBS) remains the most common cause of early-onset sepsis in newborns. Laboratory gold-standard, broth culture methods are highly specific, but lack sensitivity. the aim of this study was to validate a nested-PCR and to determine whether residue volumes of urine samples obtained by non invasive, non sterile methods could be used to confirm neonatal GBS sepsis. the nested-PCR was performed with primers of the major GBS surface antigen. Unavailability of biological samples to perform life supporting exams, as well as others to elucidate the etiology of infections is a frequent problem concerning newborn patients. Nevertheless, we decided to include cases according to strict criteria: newborns had to present with signs and symptoms compatible with GBS infection; at least one of the following biological samples had to be sent for culture: blood, urine, or cerebrospinal fluid; availability of residue volumes of the samples sent for cultures, or of others collected on the day of hospitalization, prior to antibiotic therapy prescription, to be analyzed by PCR; favorable outcome after GBS empiric treatment. in only one newborn GBS infection was confirmed by cultures, while infection was only presumptive in the other three patients (they fulfilled inclusion criteria but were GBS-culture negative). From a total of 12 biological samples (5 blood, 3 CSF and 4 urine specimen), eight were tested by culture methods (2/8 were positive), and 8 were tested by PCR (7/8 were positive), and only 4 samples were simultaneously tested by both methods (1 positive by culture and 3 by PCR). in conclusion, although based on a restricted number of neonates and samples, our results suggest that the proposed nested-PCR might be used to diagnose GBS sepsis as it has successfully amplified the three types of biological samples analyzed (blood, urine and cerebrospinal fluid), and was more sensitive than culture methods as PCR in urine confirmed diagnosis in all four patients. Moreover, PCR has enabled us to use residue volumes of urine samples collected by non invasive, non sterile methods, what is technically adequate as GBS is not part of the normal urine flora, thus avoiding invasive procedures such as suprapubic bladder punction or transurethral catheterization. At the same time, the use of urine instead of blood samples could help preventing newborns blood spoliation.Univ São Paulo, Fac Med, Lab Invest Med, Dept Pediat, São Paulo, BrazilWeb of ScienceSoc Brasileira MicrobiologiaUniversidade Federal de São Paulo (UNIFESP)Cezarino, Bruno NicolinoYamamoto, Lidia [UNIFESP]Del Negro, Gilda Maria BarbaroRocha, DaisyOkay, Thelma Suely2016-01-24T13:49:20Z2016-01-24T13:49:20Z2008-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion21-24http://dx.doi.org/10.1590/S1517-83822008000100005Brazilian Journal of Microbiology. São Paulo: Soc Brasileira Microbiologia, v. 39, n. 1, p. 21-24, 2008.10.1590/S1517-838220080001000051517-8382S1517-83822008000100005http://repositorio.unifesp.br/handle/11600/30251WOS:000255199800005engBrazilian Journal of Microbiologyinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2016-01-24T11:49:20Zoai:repositorio.unifesp.br/:11600/30251Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652016-01-24T11:49:20Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
title |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
spellingShingle |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples Cezarino, Bruno Nicolino GBS neonatal sepsis early-onset neonatal sepsis neonatal infection PCR nested-PCR |
title_short |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
title_full |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
title_fullStr |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
title_full_unstemmed |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
title_sort |
Diagnosis of neonatal group B Streptococcus sepsis by nested-PCR of residual urine samples |
author |
Cezarino, Bruno Nicolino |
author_facet |
Cezarino, Bruno Nicolino Yamamoto, Lidia [UNIFESP] Del Negro, Gilda Maria Barbaro Rocha, Daisy Okay, Thelma Suely |
author_role |
author |
author2 |
Yamamoto, Lidia [UNIFESP] Del Negro, Gilda Maria Barbaro Rocha, Daisy Okay, Thelma Suely |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Paulo (UNIFESP) |
dc.contributor.author.fl_str_mv |
Cezarino, Bruno Nicolino Yamamoto, Lidia [UNIFESP] Del Negro, Gilda Maria Barbaro Rocha, Daisy Okay, Thelma Suely |
dc.subject.por.fl_str_mv |
GBS neonatal sepsis early-onset neonatal sepsis neonatal infection PCR nested-PCR |
topic |
GBS neonatal sepsis early-onset neonatal sepsis neonatal infection PCR nested-PCR |
description |
Group B streptococcus (GBS) remains the most common cause of early-onset sepsis in newborns. Laboratory gold-standard, broth culture methods are highly specific, but lack sensitivity. the aim of this study was to validate a nested-PCR and to determine whether residue volumes of urine samples obtained by non invasive, non sterile methods could be used to confirm neonatal GBS sepsis. the nested-PCR was performed with primers of the major GBS surface antigen. Unavailability of biological samples to perform life supporting exams, as well as others to elucidate the etiology of infections is a frequent problem concerning newborn patients. Nevertheless, we decided to include cases according to strict criteria: newborns had to present with signs and symptoms compatible with GBS infection; at least one of the following biological samples had to be sent for culture: blood, urine, or cerebrospinal fluid; availability of residue volumes of the samples sent for cultures, or of others collected on the day of hospitalization, prior to antibiotic therapy prescription, to be analyzed by PCR; favorable outcome after GBS empiric treatment. in only one newborn GBS infection was confirmed by cultures, while infection was only presumptive in the other three patients (they fulfilled inclusion criteria but were GBS-culture negative). From a total of 12 biological samples (5 blood, 3 CSF and 4 urine specimen), eight were tested by culture methods (2/8 were positive), and 8 were tested by PCR (7/8 were positive), and only 4 samples were simultaneously tested by both methods (1 positive by culture and 3 by PCR). in conclusion, although based on a restricted number of neonates and samples, our results suggest that the proposed nested-PCR might be used to diagnose GBS sepsis as it has successfully amplified the three types of biological samples analyzed (blood, urine and cerebrospinal fluid), and was more sensitive than culture methods as PCR in urine confirmed diagnosis in all four patients. Moreover, PCR has enabled us to use residue volumes of urine samples collected by non invasive, non sterile methods, what is technically adequate as GBS is not part of the normal urine flora, thus avoiding invasive procedures such as suprapubic bladder punction or transurethral catheterization. At the same time, the use of urine instead of blood samples could help preventing newborns blood spoliation. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-01-01 2016-01-24T13:49:20Z 2016-01-24T13:49:20Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1517-83822008000100005 Brazilian Journal of Microbiology. São Paulo: Soc Brasileira Microbiologia, v. 39, n. 1, p. 21-24, 2008. 10.1590/S1517-83822008000100005 1517-8382 S1517-83822008000100005 http://repositorio.unifesp.br/handle/11600/30251 WOS:000255199800005 |
url |
http://dx.doi.org/10.1590/S1517-83822008000100005 http://repositorio.unifesp.br/handle/11600/30251 |
identifier_str_mv |
Brazilian Journal of Microbiology. São Paulo: Soc Brasileira Microbiologia, v. 39, n. 1, p. 21-24, 2008. 10.1590/S1517-83822008000100005 1517-8382 S1517-83822008000100005 WOS:000255199800005 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Brazilian Journal of Microbiology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
21-24 |
dc.publisher.none.fl_str_mv |
Soc Brasileira Microbiologia |
publisher.none.fl_str_mv |
Soc Brasileira Microbiologia |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268440238620672 |