Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | https://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539 https://hdl.handle.net/11600/64713 |
Resumo: | Influenza continues to be a major cause of morbidity and mortality worldwide. The aim of the study was to evaluate and compare the viral loads between Influenza B and Influenza A(H1N1)pdm09 viruses, as well as to investigate mutations, in the PA protein, of type B strains in hospitalized patients (HP) and outpatients (OP), positive for Influenza treated at Hospital São Paulo. For analysis, patients were divided into groups: (i) Immunodepressed (ID); (ii) Immunocompetent (IC), composed of HP and OP and asymptomatic (AS). To calculate the viral load, a one-step RT-qPCR assay was performed at the NS1 and M gene (Influenza B and A, respectively), with the human RNAseP gene as an endogenous control and normalizer of the threshold cycle (Ct) values. The viral load was calculated in Log10 copies of RNA/mL. In general, the highest detection rate occurred in the age range of 2-18 years (5-11 and, 2-18 years, for types A and B, respectively). For Influenza B, there was no significant difference in viral loads between groups of patients (ID, OP and HP) and ages. PA sequencing protocol was 50% successful. Pathogenicity and viral resistance mutations were not found. For H1N1pdm09, we observed a significant difference between the viral loads of AS vs. symptomatic. AS patients accounted for 9% (15/162) of infection cases. Patients with comorbidities and severe clinical symptoms, under treatment with antiviral, had a late viral clearance. Influenza B infection rates follow an age pattern, however, viral load does not seem to contribute to the frequency or outcome of the disease. The viral load of H1N1pdm09 was associated with the presence of symptoms. Contrarily to what was observed for Influenza B, H1N1pdm09 positive patients with underlying diseases and severe clinical symptoms can be considered for prolonged antiviral treatment for a complete viral clearance. |
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Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/UnifespH1n1pdm09Influenza BViral LoadAsymptomaticOseltamivirH1n1pdm09Influenza BCarga ViralAssintomáticosOseltamivirInfluenza continues to be a major cause of morbidity and mortality worldwide. The aim of the study was to evaluate and compare the viral loads between Influenza B and Influenza A(H1N1)pdm09 viruses, as well as to investigate mutations, in the PA protein, of type B strains in hospitalized patients (HP) and outpatients (OP), positive for Influenza treated at Hospital São Paulo. For analysis, patients were divided into groups: (i) Immunodepressed (ID); (ii) Immunocompetent (IC), composed of HP and OP and asymptomatic (AS). To calculate the viral load, a one-step RT-qPCR assay was performed at the NS1 and M gene (Influenza B and A, respectively), with the human RNAseP gene as an endogenous control and normalizer of the threshold cycle (Ct) values. The viral load was calculated in Log10 copies of RNA/mL. In general, the highest detection rate occurred in the age range of 2-18 years (5-11 and, 2-18 years, for types A and B, respectively). For Influenza B, there was no significant difference in viral loads between groups of patients (ID, OP and HP) and ages. PA sequencing protocol was 50% successful. Pathogenicity and viral resistance mutations were not found. For H1N1pdm09, we observed a significant difference between the viral loads of AS vs. symptomatic. AS patients accounted for 9% (15/162) of infection cases. Patients with comorbidities and severe clinical symptoms, under treatment with antiviral, had a late viral clearance. Influenza B infection rates follow an age pattern, however, viral load does not seem to contribute to the frequency or outcome of the disease. The viral load of H1N1pdm09 was associated with the presence of symptoms. Contrarily to what was observed for Influenza B, H1N1pdm09 positive patients with underlying diseases and severe clinical symptoms can be considered for prolonged antiviral treatment for a complete viral clearance.A Influenza continua sendo uma das principais causas de morbidade e mortalidade em todo o mundo. O objetivo do estudo foi de avaliar e comparar as cargas virais entre os vírus Influenza B e Influenza A(H1N1)pdm09, assim como, investigar mutações, na proteína PA, nas linhagens do tipo B, em pacientes hospitalizados (HP) e ambulatoriais (OP), positivos para Influenza, atendidos no Hospital São Paulo. Para análises, pacientes foram divididos nos grupos: (i) Imunodeprimidos (ID); (ii) Imunocompetentes (IC), composto por HP e OP e, assintomáticos (AS). Para o cálculo da carga viral, foi realizado um ensaio de one step RT-qPCR para o gene NS1 e M (Influenza B e A, respectivamente), com o gene RNAseP humano como controle endógeno e normalizador dos valores de threshold cycle (Ct). A carga viral foi calculada em Log10 cópias de RNA/mL. No geral, a maior taxa de detecção ocorreu na faixa de 2-18 anos (5-11 e, de 2-18 anos, para os tipos A e B, respectivamente). Para Influenza B, não houve diferença significante para as cargas virais entre os grupos de pacientes (ID, OP e HP) e as idades. Protocolo de sequenciamento da PA obteve sucesso de 50%. Mutações de patogenicidade e resistência virais não foram encontradas. Para H1N1pdm09, observamos diferença significante entre as cargas virais de AS vs. sintomáticos. Pacientes AS representaram 9% (15/162) dos casos de infecção. Pacientes com comorbidades e sintomas clínicos graves, sob tratamento com antiviral, tiveram um clearance tardio. Taxas de infecção por Influenza B seguem um padrão etário, porém, a carga viral parece não contribuir para frequência ou desfecho da doença. A carga viral de H1N1pdm09 foi associada a presença de sintomas. Contrariamente ao observado para Influenza B, pacientes positivos para H1N1pdm09 com doenças subjacentes e sintomas clínicos graves podem ser considerados para um tratamento antiviral prolongado para um clearance viral completo.Dados abertos - Sucupira - Teses e dissertações (2020)Universidade Federal de São Paulo (UNIFESP)Bellei, Nancy Cristina Junqueira [UNIFESP]Universidade Federal de São PauloAlves, Vitoria Rodrigues Guimaraes [UNIFESP]2022-07-21T18:58:36Z2022-07-21T18:58:36Z2020-10-29info:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/publishedVersion95 p.application/pdfhttps://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539VITORIA RODRIGUES GUIMARAES ALVES.pdfhttps://hdl.handle.net/11600/64713porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-07-27T03:05:08Zoai:repositorio.unifesp.br/:11600/64713Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-07-27T03:05:08Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
title |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
spellingShingle |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp Alves, Vitoria Rodrigues Guimaraes [UNIFESP] H1n1pdm09 Influenza B Viral Load Asymptomatic Oseltamivir H1n1pdm09 Influenza B Carga Viral Assintomáticos Oseltamivir |
title_short |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
title_full |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
title_fullStr |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
title_full_unstemmed |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
title_sort |
Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp |
author |
Alves, Vitoria Rodrigues Guimaraes [UNIFESP] |
author_facet |
Alves, Vitoria Rodrigues Guimaraes [UNIFESP] |
author_role |
author |
dc.contributor.none.fl_str_mv |
Bellei, Nancy Cristina Junqueira [UNIFESP] Universidade Federal de São Paulo |
dc.contributor.author.fl_str_mv |
Alves, Vitoria Rodrigues Guimaraes [UNIFESP] |
dc.subject.por.fl_str_mv |
H1n1pdm09 Influenza B Viral Load Asymptomatic Oseltamivir H1n1pdm09 Influenza B Carga Viral Assintomáticos Oseltamivir |
topic |
H1n1pdm09 Influenza B Viral Load Asymptomatic Oseltamivir H1n1pdm09 Influenza B Carga Viral Assintomáticos Oseltamivir |
description |
Influenza continues to be a major cause of morbidity and mortality worldwide. The aim of the study was to evaluate and compare the viral loads between Influenza B and Influenza A(H1N1)pdm09 viruses, as well as to investigate mutations, in the PA protein, of type B strains in hospitalized patients (HP) and outpatients (OP), positive for Influenza treated at Hospital São Paulo. For analysis, patients were divided into groups: (i) Immunodepressed (ID); (ii) Immunocompetent (IC), composed of HP and OP and asymptomatic (AS). To calculate the viral load, a one-step RT-qPCR assay was performed at the NS1 and M gene (Influenza B and A, respectively), with the human RNAseP gene as an endogenous control and normalizer of the threshold cycle (Ct) values. The viral load was calculated in Log10 copies of RNA/mL. In general, the highest detection rate occurred in the age range of 2-18 years (5-11 and, 2-18 years, for types A and B, respectively). For Influenza B, there was no significant difference in viral loads between groups of patients (ID, OP and HP) and ages. PA sequencing protocol was 50% successful. Pathogenicity and viral resistance mutations were not found. For H1N1pdm09, we observed a significant difference between the viral loads of AS vs. symptomatic. AS patients accounted for 9% (15/162) of infection cases. Patients with comorbidities and severe clinical symptoms, under treatment with antiviral, had a late viral clearance. Influenza B infection rates follow an age pattern, however, viral load does not seem to contribute to the frequency or outcome of the disease. The viral load of H1N1pdm09 was associated with the presence of symptoms. Contrarily to what was observed for Influenza B, H1N1pdm09 positive patients with underlying diseases and severe clinical symptoms can be considered for prolonged antiviral treatment for a complete viral clearance. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-10-29 2022-07-21T18:58:36Z 2022-07-21T18:58:36Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539 VITORIA RODRIGUES GUIMARAES ALVES.pdf https://hdl.handle.net/11600/64713 |
url |
https://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539 https://hdl.handle.net/11600/64713 |
identifier_str_mv |
VITORIA RODRIGUES GUIMARAES ALVES.pdf |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
95 p. application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de São Paulo (UNIFESP) |
publisher.none.fl_str_mv |
Universidade Federal de São Paulo (UNIFESP) |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268322379726848 |