Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp

Detalhes bibliográficos
Autor(a) principal: Alves, Vitoria Rodrigues Guimaraes [UNIFESP]
Data de Publicação: 2020
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: https://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539
https://hdl.handle.net/11600/64713
Resumo: Influenza continues to be a major cause of morbidity and mortality worldwide. The aim of the study was to evaluate and compare the viral loads between Influenza B and Influenza A(H1N1)pdm09 viruses, as well as to investigate mutations, in the PA protein, of type B strains in hospitalized patients (HP) and outpatients (OP), positive for Influenza treated at Hospital São Paulo. For analysis, patients were divided into groups: (i) Immunodepressed (ID); (ii) Immunocompetent (IC), composed of HP and OP and asymptomatic (AS). To calculate the viral load, a one-step RT-qPCR assay was performed at the NS1 and M gene (Influenza B and A, respectively), with the human RNAseP gene as an endogenous control and normalizer of the threshold cycle (Ct) values. The viral load was calculated in Log10 copies of RNA/mL. In general, the highest detection rate occurred in the age range of 2-18 years (5-11 and, 2-18 years, for types A and B, respectively). For Influenza B, there was no significant difference in viral loads between groups of patients (ID, OP and HP) and ages. PA sequencing protocol was 50% successful. Pathogenicity and viral resistance mutations were not found. For H1N1pdm09, we observed a significant difference between the viral loads of AS vs. symptomatic. AS patients accounted for 9% (15/162) of infection cases. Patients with comorbidities and severe clinical symptoms, under treatment with antiviral, had a late viral clearance. Influenza B infection rates follow an age pattern, however, viral load does not seem to contribute to the frequency or outcome of the disease. The viral load of H1N1pdm09 was associated with the presence of symptoms. Contrarily to what was observed for Influenza B, H1N1pdm09 positive patients with underlying diseases and severe clinical symptoms can be considered for prolonged antiviral treatment for a complete viral clearance.
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spelling Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/UnifespH1n1pdm09Influenza BViral LoadAsymptomaticOseltamivirH1n1pdm09Influenza BCarga ViralAssintomáticosOseltamivirInfluenza continues to be a major cause of morbidity and mortality worldwide. The aim of the study was to evaluate and compare the viral loads between Influenza B and Influenza A(H1N1)pdm09 viruses, as well as to investigate mutations, in the PA protein, of type B strains in hospitalized patients (HP) and outpatients (OP), positive for Influenza treated at Hospital São Paulo. For analysis, patients were divided into groups: (i) Immunodepressed (ID); (ii) Immunocompetent (IC), composed of HP and OP and asymptomatic (AS). To calculate the viral load, a one-step RT-qPCR assay was performed at the NS1 and M gene (Influenza B and A, respectively), with the human RNAseP gene as an endogenous control and normalizer of the threshold cycle (Ct) values. The viral load was calculated in Log10 copies of RNA/mL. In general, the highest detection rate occurred in the age range of 2-18 years (5-11 and, 2-18 years, for types A and B, respectively). For Influenza B, there was no significant difference in viral loads between groups of patients (ID, OP and HP) and ages. PA sequencing protocol was 50% successful. Pathogenicity and viral resistance mutations were not found. For H1N1pdm09, we observed a significant difference between the viral loads of AS vs. symptomatic. AS patients accounted for 9% (15/162) of infection cases. Patients with comorbidities and severe clinical symptoms, under treatment with antiviral, had a late viral clearance. Influenza B infection rates follow an age pattern, however, viral load does not seem to contribute to the frequency or outcome of the disease. The viral load of H1N1pdm09 was associated with the presence of symptoms. Contrarily to what was observed for Influenza B, H1N1pdm09 positive patients with underlying diseases and severe clinical symptoms can be considered for prolonged antiviral treatment for a complete viral clearance.A Influenza continua sendo uma das principais causas de morbidade e mortalidade em todo o mundo. O objetivo do estudo foi de avaliar e comparar as cargas virais entre os vírus Influenza B e Influenza A(H1N1)pdm09, assim como, investigar mutações, na proteína PA, nas linhagens do tipo B, em pacientes hospitalizados (HP) e ambulatoriais (OP), positivos para Influenza, atendidos no Hospital São Paulo. Para análises, pacientes foram divididos nos grupos: (i) Imunodeprimidos (ID); (ii) Imunocompetentes (IC), composto por HP e OP e, assintomáticos (AS). Para o cálculo da carga viral, foi realizado um ensaio de one step RT-qPCR para o gene NS1 e M (Influenza B e A, respectivamente), com o gene RNAseP humano como controle endógeno e normalizador dos valores de threshold cycle (Ct). A carga viral foi calculada em Log10 cópias de RNA/mL. No geral, a maior taxa de detecção ocorreu na faixa de 2-18 anos (5-11 e, de 2-18 anos, para os tipos A e B, respectivamente). Para Influenza B, não houve diferença significante para as cargas virais entre os grupos de pacientes (ID, OP e HP) e as idades. Protocolo de sequenciamento da PA obteve sucesso de 50%. Mutações de patogenicidade e resistência virais não foram encontradas. Para H1N1pdm09, observamos diferença significante entre as cargas virais de AS vs. sintomáticos. Pacientes AS representaram 9% (15/162) dos casos de infecção. Pacientes com comorbidades e sintomas clínicos graves, sob tratamento com antiviral, tiveram um clearance tardio. Taxas de infecção por Influenza B seguem um padrão etário, porém, a carga viral parece não contribuir para frequência ou desfecho da doença. A carga viral de H1N1pdm09 foi associada a presença de sintomas. Contrariamente ao observado para Influenza B, pacientes positivos para H1N1pdm09 com doenças subjacentes e sintomas clínicos graves podem ser considerados para um tratamento antiviral prolongado para um clearance viral completo.Dados abertos - Sucupira - Teses e dissertações (2020)Universidade Federal de São Paulo (UNIFESP)Bellei, Nancy Cristina Junqueira [UNIFESP]Universidade Federal de São PauloAlves, Vitoria Rodrigues Guimaraes [UNIFESP]2022-07-21T18:58:36Z2022-07-21T18:58:36Z2020-10-29info:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/publishedVersion95 p.application/pdfhttps://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539VITORIA RODRIGUES GUIMARAES ALVES.pdfhttps://hdl.handle.net/11600/64713porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-07-27T03:05:08Zoai:repositorio.unifesp.br/:11600/64713Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-07-27T03:05:08Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
title Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
spellingShingle Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
Alves, Vitoria Rodrigues Guimaraes [UNIFESP]
H1n1pdm09
Influenza B
Viral Load
Asymptomatic
Oseltamivir
H1n1pdm09
Influenza B
Carga Viral
Assintomáticos
Oseltamivir
title_short Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
title_full Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
title_fullStr Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
title_full_unstemmed Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
title_sort Carga Viral de Influenza a H1n1pdm09 e Influenza B em Pacientes Hospitalizados e Ambulatoriais do Complexo Hospitalar Hospital São Paulo/Unifesp
author Alves, Vitoria Rodrigues Guimaraes [UNIFESP]
author_facet Alves, Vitoria Rodrigues Guimaraes [UNIFESP]
author_role author
dc.contributor.none.fl_str_mv Bellei, Nancy Cristina Junqueira [UNIFESP]
Universidade Federal de São Paulo
dc.contributor.author.fl_str_mv Alves, Vitoria Rodrigues Guimaraes [UNIFESP]
dc.subject.por.fl_str_mv H1n1pdm09
Influenza B
Viral Load
Asymptomatic
Oseltamivir
H1n1pdm09
Influenza B
Carga Viral
Assintomáticos
Oseltamivir
topic H1n1pdm09
Influenza B
Viral Load
Asymptomatic
Oseltamivir
H1n1pdm09
Influenza B
Carga Viral
Assintomáticos
Oseltamivir
description Influenza continues to be a major cause of morbidity and mortality worldwide. The aim of the study was to evaluate and compare the viral loads between Influenza B and Influenza A(H1N1)pdm09 viruses, as well as to investigate mutations, in the PA protein, of type B strains in hospitalized patients (HP) and outpatients (OP), positive for Influenza treated at Hospital São Paulo. For analysis, patients were divided into groups: (i) Immunodepressed (ID); (ii) Immunocompetent (IC), composed of HP and OP and asymptomatic (AS). To calculate the viral load, a one-step RT-qPCR assay was performed at the NS1 and M gene (Influenza B and A, respectively), with the human RNAseP gene as an endogenous control and normalizer of the threshold cycle (Ct) values. The viral load was calculated in Log10 copies of RNA/mL. In general, the highest detection rate occurred in the age range of 2-18 years (5-11 and, 2-18 years, for types A and B, respectively). For Influenza B, there was no significant difference in viral loads between groups of patients (ID, OP and HP) and ages. PA sequencing protocol was 50% successful. Pathogenicity and viral resistance mutations were not found. For H1N1pdm09, we observed a significant difference between the viral loads of AS vs. symptomatic. AS patients accounted for 9% (15/162) of infection cases. Patients with comorbidities and severe clinical symptoms, under treatment with antiviral, had a late viral clearance. Influenza B infection rates follow an age pattern, however, viral load does not seem to contribute to the frequency or outcome of the disease. The viral load of H1N1pdm09 was associated with the presence of symptoms. Contrarily to what was observed for Influenza B, H1N1pdm09 positive patients with underlying diseases and severe clinical symptoms can be considered for prolonged antiviral treatment for a complete viral clearance.
publishDate 2020
dc.date.none.fl_str_mv 2020-10-29
2022-07-21T18:58:36Z
2022-07-21T18:58:36Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539
VITORIA RODRIGUES GUIMARAES ALVES.pdf
https://hdl.handle.net/11600/64713
url https://sucupira.capes.gov.br/sucupira/public/consultas/coleta/trabalhoConclusao/viewTrabalhoConclusao.jsf?popup=true&id_trabalho=9516539
https://hdl.handle.net/11600/64713
identifier_str_mv VITORIA RODRIGUES GUIMARAES ALVES.pdf
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 95 p.
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de São Paulo (UNIFESP)
publisher.none.fl_str_mv Universidade Federal de São Paulo (UNIFESP)
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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