Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli

Detalhes bibliográficos
Autor(a) principal: Stoco, Patricia Hermes
Data de Publicação: 2014
Outros Autores: Wagner, Glauber, Talavera-Lopez, Carlos, Gerber, Alexandra, Zaha, Arnaldo, Thompson, Claudia Elizabeth, Bartholomeu, Daniella Castanheira, Lueckemeyer, Debora Denardin, Bahia, Diana [UNIFESP], Loreto, Elgion, Prestes, Elisa Beatriz, Lima, Fabio Mitsuo [UNIFESP], Rodrigues-Luiz, Gabriela, Adolfo Vallejo, Gustavo, Franco da Silveira, José [UNIFESP], Schenkman, Sergio [UNIFESP], Monteiro, Karina Mariante, Tyler, Kevin Morris, Paula de Almeida, Luiz Gonzaga, Ortiz, Mauro Freitas, Chiurillo, Miguel Angel [UNIFESP], Moraes, Milene Hoeehr de, Cunha, Oberdan de Lima, Mendonca-Neto, Rondon, Silva, Rosane, Ribeiro Teixeira, Santuza Maria, Fonseca Murta, Silvane Maria, Marques Sincero, Thais Cristine, Oliveira Mendes, Tiago Antonio de, Urmenyi, Turan Peter, Silva, Viviane Grazielle, Rocha, Wanderson Duarte da, Andersson, Bjoern, Romanha, Alvaro Jose, Steindel, Mario, Ribeiro de Vasconcelos, Ana Tereza, Grisard, Edmundo Carlos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://dx.doi.org/10.1371/journal.pntd.0003176
http://repositorio.unifesp.br/handle/11600/38128
Resumo: Background: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America. It does not cause human disease, but it can be mistaken for the etiologic agent of Chagas disease, Trypanosoma cruzi. We have sequenced the T. rangeli genome to provide new tools for elucidating the distinct and intriguing biology of this species and the key pathways related to interaction with its arthropod and mammalian hosts.Methodology/Principal Findings: the T. rangeli haploid genome is similar to 24 Mb in length, and is the smallest and least repetitive trypanosomatid genome sequenced thus far. This parasite genome has shorter subtelomeric sequences compared to those of T. cruzi and T. brucei; displays intraspecific karyotype variability and lacks minichromosomes. of the predicted 7,613 protein coding sequences, functional annotations could be determined for 2,415, while 5,043 are hypothetical proteins, some with evidence of protein expression. 7,101 genes (93%) are shared with other trypanosomatids that infect humans. An ortholog of the dcl2 gene involved in the T. brucei RNAi pathway was found in T. rangeli, but the RNAi machinery is non-functional since the other genes in this pathway are pseudogenized. T. rangeli is highly susceptible to oxidative stress, a phenotype that may be explained by a smaller number of anti-oxidant defense enzymes and heat-shock proteins.Conclusions/Significance: Phylogenetic comparison of nuclear and mitochondrial genes indicates that T. rangeli and T. cruzi are equidistant from T. brucei. in addition to revealing new aspects of trypanosome co-evolution within the vertebrate and invertebrate hosts, comparative genomic analysis with pathogenic trypanosomatids provides valuable new information that can be further explored with the aim of developing better diagnostic tools and/or therapeutic targets.
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spelling Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeliBackground: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America. It does not cause human disease, but it can be mistaken for the etiologic agent of Chagas disease, Trypanosoma cruzi. We have sequenced the T. rangeli genome to provide new tools for elucidating the distinct and intriguing biology of this species and the key pathways related to interaction with its arthropod and mammalian hosts.Methodology/Principal Findings: the T. rangeli haploid genome is similar to 24 Mb in length, and is the smallest and least repetitive trypanosomatid genome sequenced thus far. This parasite genome has shorter subtelomeric sequences compared to those of T. cruzi and T. brucei; displays intraspecific karyotype variability and lacks minichromosomes. of the predicted 7,613 protein coding sequences, functional annotations could be determined for 2,415, while 5,043 are hypothetical proteins, some with evidence of protein expression. 7,101 genes (93%) are shared with other trypanosomatids that infect humans. An ortholog of the dcl2 gene involved in the T. brucei RNAi pathway was found in T. rangeli, but the RNAi machinery is non-functional since the other genes in this pathway are pseudogenized. T. rangeli is highly susceptible to oxidative stress, a phenotype that may be explained by a smaller number of anti-oxidant defense enzymes and heat-shock proteins.Conclusions/Significance: Phylogenetic comparison of nuclear and mitochondrial genes indicates that T. rangeli and T. cruzi are equidistant from T. brucei. in addition to revealing new aspects of trypanosome co-evolution within the vertebrate and invertebrate hosts, comparative genomic analysis with pathogenic trypanosomatids provides valuable new information that can be further explored with the aim of developing better diagnostic tools and/or therapeutic targets.Univ Fed Santa Catarina, Florianopolis, SC, BrazilUniv Oeste Santa Catarina, Joacaba, SC, BrazilKarolinska Inst, Sci Life Lab, Dept Cell & Mol Biol, Stockholm, SwedenLab Nacl Comp Cient, Rio de Janeiro, BrazilUniv Fed Rio Grande do Sul, Porto Alegre, RS, BrazilUniv Fed Minas Gerais, Belo Horizonte, MG, BrazilUniversidade Federal de São Paulo, Escola Paulista Med, São Paulo, BrazilUniv Fed Santa Maria, BR-97119900 Santa Maria, RS, BrazilUniv Tolima, Ibague, ColombiaUniv E Anglia, Sch Med Hlth Policy & Practice, Biomed Res Ctr, Norwich NR4 7TJ, Norfolk, EnglandUniv Centroccidental Lisandro Alvarado, Barquisimeto, VenezuelaUniv Fed Rio de Janeiro, Rio de Janeiro, BrazilFundacao Oswaldo Cruz, Ctr Pesquisas Rene Rachou, Belo Horizonte, MG, BrazilUniv Fed Parana, BR-80060000 Curitiba, Parana, BrazilUniversidade Federal de São Paulo, Escola Paulista Med, São Paulo, BrazilWeb of ScienceConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FINEPPublic Library ScienceUniversidade Federal de Santa Catarina (UFSC)Univ Oeste Santa CatarinaKarolinska InstLab Nacl Comp CientUniv Fed Rio Grande do SulUniversidade Federal de Minas Gerais (UFMG)Universidade Federal de São Paulo (UNIFESP)Universidade Federal de Sergipe (UFS)Univ TolimaUniv E AngliaUniv Centroccidental Lisandro AlvaradoUniversidade Federal do Rio de Janeiro (UFRJ)Fundacao Oswaldo CruzUniv Fed ParanaStoco, Patricia HermesWagner, GlauberTalavera-Lopez, CarlosGerber, AlexandraZaha, ArnaldoThompson, Claudia ElizabethBartholomeu, Daniella CastanheiraLueckemeyer, Debora DenardinBahia, Diana [UNIFESP]Loreto, ElgionPrestes, Elisa BeatrizLima, Fabio Mitsuo [UNIFESP]Rodrigues-Luiz, GabrielaAdolfo Vallejo, GustavoFranco da Silveira, José [UNIFESP]Schenkman, Sergio [UNIFESP]Monteiro, Karina MarianteTyler, Kevin MorrisPaula de Almeida, Luiz GonzagaOrtiz, Mauro FreitasChiurillo, Miguel Angel [UNIFESP]Moraes, Milene Hoeehr deCunha, Oberdan de LimaMendonca-Neto, RondonSilva, RosaneRibeiro Teixeira, Santuza MariaFonseca Murta, Silvane MariaMarques Sincero, Thais CristineOliveira Mendes, Tiago Antonio deUrmenyi, Turan PeterSilva, Viviane GrazielleRocha, Wanderson Duarte daAndersson, BjoernRomanha, Alvaro JoseSteindel, MarioRibeiro de Vasconcelos, Ana TerezaGrisard, Edmundo Carlos2016-01-24T14:37:46Z2016-01-24T14:37:46Z2014-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion17application/pdfhttp://dx.doi.org/10.1371/journal.pntd.0003176Plos Neglected Tropical Diseases. San Francisco: Public Library Science, v. 8, n. 9, 17 p., 2014.10.1371/journal.pntd.0003176WOS000342796600053.pdf1935-2735http://repositorio.unifesp.br/handle/11600/38128WOS:000342796600053engPlos Neglected Tropical Diseasesinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-08-08T16:57:26Zoai:repositorio.unifesp.br/:11600/38128Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-08-08T16:57:26Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
title Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
spellingShingle Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
Stoco, Patricia Hermes
title_short Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
title_full Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
title_fullStr Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
title_full_unstemmed Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
title_sort Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
author Stoco, Patricia Hermes
author_facet Stoco, Patricia Hermes
Wagner, Glauber
Talavera-Lopez, Carlos
Gerber, Alexandra
Zaha, Arnaldo
Thompson, Claudia Elizabeth
Bartholomeu, Daniella Castanheira
Lueckemeyer, Debora Denardin
Bahia, Diana [UNIFESP]
Loreto, Elgion
Prestes, Elisa Beatriz
Lima, Fabio Mitsuo [UNIFESP]
Rodrigues-Luiz, Gabriela
Adolfo Vallejo, Gustavo
Franco da Silveira, José [UNIFESP]
Schenkman, Sergio [UNIFESP]
Monteiro, Karina Mariante
Tyler, Kevin Morris
Paula de Almeida, Luiz Gonzaga
Ortiz, Mauro Freitas
Chiurillo, Miguel Angel [UNIFESP]
Moraes, Milene Hoeehr de
Cunha, Oberdan de Lima
Mendonca-Neto, Rondon
Silva, Rosane
Ribeiro Teixeira, Santuza Maria
Fonseca Murta, Silvane Maria
Marques Sincero, Thais Cristine
Oliveira Mendes, Tiago Antonio de
Urmenyi, Turan Peter
Silva, Viviane Grazielle
Rocha, Wanderson Duarte da
Andersson, Bjoern
Romanha, Alvaro Jose
Steindel, Mario
Ribeiro de Vasconcelos, Ana Tereza
Grisard, Edmundo Carlos
author_role author
author2 Wagner, Glauber
Talavera-Lopez, Carlos
Gerber, Alexandra
Zaha, Arnaldo
Thompson, Claudia Elizabeth
Bartholomeu, Daniella Castanheira
Lueckemeyer, Debora Denardin
Bahia, Diana [UNIFESP]
Loreto, Elgion
Prestes, Elisa Beatriz
Lima, Fabio Mitsuo [UNIFESP]
Rodrigues-Luiz, Gabriela
Adolfo Vallejo, Gustavo
Franco da Silveira, José [UNIFESP]
Schenkman, Sergio [UNIFESP]
Monteiro, Karina Mariante
Tyler, Kevin Morris
Paula de Almeida, Luiz Gonzaga
Ortiz, Mauro Freitas
Chiurillo, Miguel Angel [UNIFESP]
Moraes, Milene Hoeehr de
Cunha, Oberdan de Lima
Mendonca-Neto, Rondon
Silva, Rosane
Ribeiro Teixeira, Santuza Maria
Fonseca Murta, Silvane Maria
Marques Sincero, Thais Cristine
Oliveira Mendes, Tiago Antonio de
Urmenyi, Turan Peter
Silva, Viviane Grazielle
Rocha, Wanderson Duarte da
Andersson, Bjoern
Romanha, Alvaro Jose
Steindel, Mario
Ribeiro de Vasconcelos, Ana Tereza
Grisard, Edmundo Carlos
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Santa Catarina (UFSC)
Univ Oeste Santa Catarina
Karolinska Inst
Lab Nacl Comp Cient
Univ Fed Rio Grande do Sul
Universidade Federal de Minas Gerais (UFMG)
Universidade Federal de São Paulo (UNIFESP)
Universidade Federal de Sergipe (UFS)
Univ Tolima
Univ E Anglia
Univ Centroccidental Lisandro Alvarado
Universidade Federal do Rio de Janeiro (UFRJ)
Fundacao Oswaldo Cruz
Univ Fed Parana
dc.contributor.author.fl_str_mv Stoco, Patricia Hermes
Wagner, Glauber
Talavera-Lopez, Carlos
Gerber, Alexandra
Zaha, Arnaldo
Thompson, Claudia Elizabeth
Bartholomeu, Daniella Castanheira
Lueckemeyer, Debora Denardin
Bahia, Diana [UNIFESP]
Loreto, Elgion
Prestes, Elisa Beatriz
Lima, Fabio Mitsuo [UNIFESP]
Rodrigues-Luiz, Gabriela
Adolfo Vallejo, Gustavo
Franco da Silveira, José [UNIFESP]
Schenkman, Sergio [UNIFESP]
Monteiro, Karina Mariante
Tyler, Kevin Morris
Paula de Almeida, Luiz Gonzaga
Ortiz, Mauro Freitas
Chiurillo, Miguel Angel [UNIFESP]
Moraes, Milene Hoeehr de
Cunha, Oberdan de Lima
Mendonca-Neto, Rondon
Silva, Rosane
Ribeiro Teixeira, Santuza Maria
Fonseca Murta, Silvane Maria
Marques Sincero, Thais Cristine
Oliveira Mendes, Tiago Antonio de
Urmenyi, Turan Peter
Silva, Viviane Grazielle
Rocha, Wanderson Duarte da
Andersson, Bjoern
Romanha, Alvaro Jose
Steindel, Mario
Ribeiro de Vasconcelos, Ana Tereza
Grisard, Edmundo Carlos
description Background: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America. It does not cause human disease, but it can be mistaken for the etiologic agent of Chagas disease, Trypanosoma cruzi. We have sequenced the T. rangeli genome to provide new tools for elucidating the distinct and intriguing biology of this species and the key pathways related to interaction with its arthropod and mammalian hosts.Methodology/Principal Findings: the T. rangeli haploid genome is similar to 24 Mb in length, and is the smallest and least repetitive trypanosomatid genome sequenced thus far. This parasite genome has shorter subtelomeric sequences compared to those of T. cruzi and T. brucei; displays intraspecific karyotype variability and lacks minichromosomes. of the predicted 7,613 protein coding sequences, functional annotations could be determined for 2,415, while 5,043 are hypothetical proteins, some with evidence of protein expression. 7,101 genes (93%) are shared with other trypanosomatids that infect humans. An ortholog of the dcl2 gene involved in the T. brucei RNAi pathway was found in T. rangeli, but the RNAi machinery is non-functional since the other genes in this pathway are pseudogenized. T. rangeli is highly susceptible to oxidative stress, a phenotype that may be explained by a smaller number of anti-oxidant defense enzymes and heat-shock proteins.Conclusions/Significance: Phylogenetic comparison of nuclear and mitochondrial genes indicates that T. rangeli and T. cruzi are equidistant from T. brucei. in addition to revealing new aspects of trypanosome co-evolution within the vertebrate and invertebrate hosts, comparative genomic analysis with pathogenic trypanosomatids provides valuable new information that can be further explored with the aim of developing better diagnostic tools and/or therapeutic targets.
publishDate 2014
dc.date.none.fl_str_mv 2014-09-01
2016-01-24T14:37:46Z
2016-01-24T14:37:46Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pntd.0003176
Plos Neglected Tropical Diseases. San Francisco: Public Library Science, v. 8, n. 9, 17 p., 2014.
10.1371/journal.pntd.0003176
WOS000342796600053.pdf
1935-2735
http://repositorio.unifesp.br/handle/11600/38128
WOS:000342796600053
url http://dx.doi.org/10.1371/journal.pntd.0003176
http://repositorio.unifesp.br/handle/11600/38128
identifier_str_mv Plos Neglected Tropical Diseases. San Francisco: Public Library Science, v. 8, n. 9, 17 p., 2014.
10.1371/journal.pntd.0003176
WOS000342796600053.pdf
1935-2735
WOS:000342796600053
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Plos Neglected Tropical Diseases
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 17
application/pdf
dc.publisher.none.fl_str_mv Public Library Science
publisher.none.fl_str_mv Public Library Science
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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