Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1371/journal.pntd.0003176 http://repositorio.unifesp.br/handle/11600/38128 |
Resumo: | Background: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America. It does not cause human disease, but it can be mistaken for the etiologic agent of Chagas disease, Trypanosoma cruzi. We have sequenced the T. rangeli genome to provide new tools for elucidating the distinct and intriguing biology of this species and the key pathways related to interaction with its arthropod and mammalian hosts.Methodology/Principal Findings: the T. rangeli haploid genome is similar to 24 Mb in length, and is the smallest and least repetitive trypanosomatid genome sequenced thus far. This parasite genome has shorter subtelomeric sequences compared to those of T. cruzi and T. brucei; displays intraspecific karyotype variability and lacks minichromosomes. of the predicted 7,613 protein coding sequences, functional annotations could be determined for 2,415, while 5,043 are hypothetical proteins, some with evidence of protein expression. 7,101 genes (93%) are shared with other trypanosomatids that infect humans. An ortholog of the dcl2 gene involved in the T. brucei RNAi pathway was found in T. rangeli, but the RNAi machinery is non-functional since the other genes in this pathway are pseudogenized. T. rangeli is highly susceptible to oxidative stress, a phenotype that may be explained by a smaller number of anti-oxidant defense enzymes and heat-shock proteins.Conclusions/Significance: Phylogenetic comparison of nuclear and mitochondrial genes indicates that T. rangeli and T. cruzi are equidistant from T. brucei. in addition to revealing new aspects of trypanosome co-evolution within the vertebrate and invertebrate hosts, comparative genomic analysis with pathogenic trypanosomatids provides valuable new information that can be further explored with the aim of developing better diagnostic tools and/or therapeutic targets. |
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Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeliBackground: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America. It does not cause human disease, but it can be mistaken for the etiologic agent of Chagas disease, Trypanosoma cruzi. We have sequenced the T. rangeli genome to provide new tools for elucidating the distinct and intriguing biology of this species and the key pathways related to interaction with its arthropod and mammalian hosts.Methodology/Principal Findings: the T. rangeli haploid genome is similar to 24 Mb in length, and is the smallest and least repetitive trypanosomatid genome sequenced thus far. This parasite genome has shorter subtelomeric sequences compared to those of T. cruzi and T. brucei; displays intraspecific karyotype variability and lacks minichromosomes. of the predicted 7,613 protein coding sequences, functional annotations could be determined for 2,415, while 5,043 are hypothetical proteins, some with evidence of protein expression. 7,101 genes (93%) are shared with other trypanosomatids that infect humans. An ortholog of the dcl2 gene involved in the T. brucei RNAi pathway was found in T. rangeli, but the RNAi machinery is non-functional since the other genes in this pathway are pseudogenized. T. rangeli is highly susceptible to oxidative stress, a phenotype that may be explained by a smaller number of anti-oxidant defense enzymes and heat-shock proteins.Conclusions/Significance: Phylogenetic comparison of nuclear and mitochondrial genes indicates that T. rangeli and T. cruzi are equidistant from T. brucei. in addition to revealing new aspects of trypanosome co-evolution within the vertebrate and invertebrate hosts, comparative genomic analysis with pathogenic trypanosomatids provides valuable new information that can be further explored with the aim of developing better diagnostic tools and/or therapeutic targets.Univ Fed Santa Catarina, Florianopolis, SC, BrazilUniv Oeste Santa Catarina, Joacaba, SC, BrazilKarolinska Inst, Sci Life Lab, Dept Cell & Mol Biol, Stockholm, SwedenLab Nacl Comp Cient, Rio de Janeiro, BrazilUniv Fed Rio Grande do Sul, Porto Alegre, RS, BrazilUniv Fed Minas Gerais, Belo Horizonte, MG, BrazilUniversidade Federal de São Paulo, Escola Paulista Med, São Paulo, BrazilUniv Fed Santa Maria, BR-97119900 Santa Maria, RS, BrazilUniv Tolima, Ibague, ColombiaUniv E Anglia, Sch Med Hlth Policy & Practice, Biomed Res Ctr, Norwich NR4 7TJ, Norfolk, EnglandUniv Centroccidental Lisandro Alvarado, Barquisimeto, VenezuelaUniv Fed Rio de Janeiro, Rio de Janeiro, BrazilFundacao Oswaldo Cruz, Ctr Pesquisas Rene Rachou, Belo Horizonte, MG, BrazilUniv Fed Parana, BR-80060000 Curitiba, Parana, BrazilUniversidade Federal de São Paulo, Escola Paulista Med, São Paulo, BrazilWeb of ScienceConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FINEPPublic Library ScienceUniversidade Federal de Santa Catarina (UFSC)Univ Oeste Santa CatarinaKarolinska InstLab Nacl Comp CientUniv Fed Rio Grande do SulUniversidade Federal de Minas Gerais (UFMG)Universidade Federal de São Paulo (UNIFESP)Universidade Federal de Sergipe (UFS)Univ TolimaUniv E AngliaUniv Centroccidental Lisandro AlvaradoUniversidade Federal do Rio de Janeiro (UFRJ)Fundacao Oswaldo CruzUniv Fed ParanaStoco, Patricia HermesWagner, GlauberTalavera-Lopez, CarlosGerber, AlexandraZaha, ArnaldoThompson, Claudia ElizabethBartholomeu, Daniella CastanheiraLueckemeyer, Debora DenardinBahia, Diana [UNIFESP]Loreto, ElgionPrestes, Elisa BeatrizLima, Fabio Mitsuo [UNIFESP]Rodrigues-Luiz, GabrielaAdolfo Vallejo, GustavoFranco da Silveira, José [UNIFESP]Schenkman, Sergio [UNIFESP]Monteiro, Karina MarianteTyler, Kevin MorrisPaula de Almeida, Luiz GonzagaOrtiz, Mauro FreitasChiurillo, Miguel Angel [UNIFESP]Moraes, Milene Hoeehr deCunha, Oberdan de LimaMendonca-Neto, RondonSilva, RosaneRibeiro Teixeira, Santuza MariaFonseca Murta, Silvane MariaMarques Sincero, Thais CristineOliveira Mendes, Tiago Antonio deUrmenyi, Turan PeterSilva, Viviane GrazielleRocha, Wanderson Duarte daAndersson, BjoernRomanha, Alvaro JoseSteindel, MarioRibeiro de Vasconcelos, Ana TerezaGrisard, Edmundo Carlos2016-01-24T14:37:46Z2016-01-24T14:37:46Z2014-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion17application/pdfhttp://dx.doi.org/10.1371/journal.pntd.0003176Plos Neglected Tropical Diseases. San Francisco: Public Library Science, v. 8, n. 9, 17 p., 2014.10.1371/journal.pntd.0003176WOS000342796600053.pdf1935-2735http://repositorio.unifesp.br/handle/11600/38128WOS:000342796600053engPlos Neglected Tropical Diseasesinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-08-08T16:57:26Zoai:repositorio.unifesp.br/:11600/38128Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-08-08T16:57:26Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
title |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
spellingShingle |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli Stoco, Patricia Hermes |
title_short |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
title_full |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
title_fullStr |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
title_full_unstemmed |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
title_sort |
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli |
author |
Stoco, Patricia Hermes |
author_facet |
Stoco, Patricia Hermes Wagner, Glauber Talavera-Lopez, Carlos Gerber, Alexandra Zaha, Arnaldo Thompson, Claudia Elizabeth Bartholomeu, Daniella Castanheira Lueckemeyer, Debora Denardin Bahia, Diana [UNIFESP] Loreto, Elgion Prestes, Elisa Beatriz Lima, Fabio Mitsuo [UNIFESP] Rodrigues-Luiz, Gabriela Adolfo Vallejo, Gustavo Franco da Silveira, José [UNIFESP] Schenkman, Sergio [UNIFESP] Monteiro, Karina Mariante Tyler, Kevin Morris Paula de Almeida, Luiz Gonzaga Ortiz, Mauro Freitas Chiurillo, Miguel Angel [UNIFESP] Moraes, Milene Hoeehr de Cunha, Oberdan de Lima Mendonca-Neto, Rondon Silva, Rosane Ribeiro Teixeira, Santuza Maria Fonseca Murta, Silvane Maria Marques Sincero, Thais Cristine Oliveira Mendes, Tiago Antonio de Urmenyi, Turan Peter Silva, Viviane Grazielle Rocha, Wanderson Duarte da Andersson, Bjoern Romanha, Alvaro Jose Steindel, Mario Ribeiro de Vasconcelos, Ana Tereza Grisard, Edmundo Carlos |
author_role |
author |
author2 |
Wagner, Glauber Talavera-Lopez, Carlos Gerber, Alexandra Zaha, Arnaldo Thompson, Claudia Elizabeth Bartholomeu, Daniella Castanheira Lueckemeyer, Debora Denardin Bahia, Diana [UNIFESP] Loreto, Elgion Prestes, Elisa Beatriz Lima, Fabio Mitsuo [UNIFESP] Rodrigues-Luiz, Gabriela Adolfo Vallejo, Gustavo Franco da Silveira, José [UNIFESP] Schenkman, Sergio [UNIFESP] Monteiro, Karina Mariante Tyler, Kevin Morris Paula de Almeida, Luiz Gonzaga Ortiz, Mauro Freitas Chiurillo, Miguel Angel [UNIFESP] Moraes, Milene Hoeehr de Cunha, Oberdan de Lima Mendonca-Neto, Rondon Silva, Rosane Ribeiro Teixeira, Santuza Maria Fonseca Murta, Silvane Maria Marques Sincero, Thais Cristine Oliveira Mendes, Tiago Antonio de Urmenyi, Turan Peter Silva, Viviane Grazielle Rocha, Wanderson Duarte da Andersson, Bjoern Romanha, Alvaro Jose Steindel, Mario Ribeiro de Vasconcelos, Ana Tereza Grisard, Edmundo Carlos |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de Santa Catarina (UFSC) Univ Oeste Santa Catarina Karolinska Inst Lab Nacl Comp Cient Univ Fed Rio Grande do Sul Universidade Federal de Minas Gerais (UFMG) Universidade Federal de São Paulo (UNIFESP) Universidade Federal de Sergipe (UFS) Univ Tolima Univ E Anglia Univ Centroccidental Lisandro Alvarado Universidade Federal do Rio de Janeiro (UFRJ) Fundacao Oswaldo Cruz Univ Fed Parana |
dc.contributor.author.fl_str_mv |
Stoco, Patricia Hermes Wagner, Glauber Talavera-Lopez, Carlos Gerber, Alexandra Zaha, Arnaldo Thompson, Claudia Elizabeth Bartholomeu, Daniella Castanheira Lueckemeyer, Debora Denardin Bahia, Diana [UNIFESP] Loreto, Elgion Prestes, Elisa Beatriz Lima, Fabio Mitsuo [UNIFESP] Rodrigues-Luiz, Gabriela Adolfo Vallejo, Gustavo Franco da Silveira, José [UNIFESP] Schenkman, Sergio [UNIFESP] Monteiro, Karina Mariante Tyler, Kevin Morris Paula de Almeida, Luiz Gonzaga Ortiz, Mauro Freitas Chiurillo, Miguel Angel [UNIFESP] Moraes, Milene Hoeehr de Cunha, Oberdan de Lima Mendonca-Neto, Rondon Silva, Rosane Ribeiro Teixeira, Santuza Maria Fonseca Murta, Silvane Maria Marques Sincero, Thais Cristine Oliveira Mendes, Tiago Antonio de Urmenyi, Turan Peter Silva, Viviane Grazielle Rocha, Wanderson Duarte da Andersson, Bjoern Romanha, Alvaro Jose Steindel, Mario Ribeiro de Vasconcelos, Ana Tereza Grisard, Edmundo Carlos |
description |
Background: Trypanosoma rangeli is a hemoflagellate protozoan parasite infecting humans and other wild and domestic mammals across Central and South America. It does not cause human disease, but it can be mistaken for the etiologic agent of Chagas disease, Trypanosoma cruzi. We have sequenced the T. rangeli genome to provide new tools for elucidating the distinct and intriguing biology of this species and the key pathways related to interaction with its arthropod and mammalian hosts.Methodology/Principal Findings: the T. rangeli haploid genome is similar to 24 Mb in length, and is the smallest and least repetitive trypanosomatid genome sequenced thus far. This parasite genome has shorter subtelomeric sequences compared to those of T. cruzi and T. brucei; displays intraspecific karyotype variability and lacks minichromosomes. of the predicted 7,613 protein coding sequences, functional annotations could be determined for 2,415, while 5,043 are hypothetical proteins, some with evidence of protein expression. 7,101 genes (93%) are shared with other trypanosomatids that infect humans. An ortholog of the dcl2 gene involved in the T. brucei RNAi pathway was found in T. rangeli, but the RNAi machinery is non-functional since the other genes in this pathway are pseudogenized. T. rangeli is highly susceptible to oxidative stress, a phenotype that may be explained by a smaller number of anti-oxidant defense enzymes and heat-shock proteins.Conclusions/Significance: Phylogenetic comparison of nuclear and mitochondrial genes indicates that T. rangeli and T. cruzi are equidistant from T. brucei. in addition to revealing new aspects of trypanosome co-evolution within the vertebrate and invertebrate hosts, comparative genomic analysis with pathogenic trypanosomatids provides valuable new information that can be further explored with the aim of developing better diagnostic tools and/or therapeutic targets. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-09-01 2016-01-24T14:37:46Z 2016-01-24T14:37:46Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1371/journal.pntd.0003176 Plos Neglected Tropical Diseases. San Francisco: Public Library Science, v. 8, n. 9, 17 p., 2014. 10.1371/journal.pntd.0003176 WOS000342796600053.pdf 1935-2735 http://repositorio.unifesp.br/handle/11600/38128 WOS:000342796600053 |
url |
http://dx.doi.org/10.1371/journal.pntd.0003176 http://repositorio.unifesp.br/handle/11600/38128 |
identifier_str_mv |
Plos Neglected Tropical Diseases. San Francisco: Public Library Science, v. 8, n. 9, 17 p., 2014. 10.1371/journal.pntd.0003176 WOS000342796600053.pdf 1935-2735 WOS:000342796600053 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Plos Neglected Tropical Diseases |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
17 application/pdf |
dc.publisher.none.fl_str_mv |
Public Library Science |
publisher.none.fl_str_mv |
Public Library Science |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268443667464192 |