Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism

Detalhes bibliográficos
Autor(a) principal: Zanini, Ms
Data de Publicação: 2001
Outros Autores: Moreira, Ec, Lopes, Mtp, Oliveira, Rs [UNIFESP], Leao, Sylvia Cardoso [UNIFESP], Fioravanti, Rl, Roxo, E, Zumarraga, M, Romano, Mi, Cataldi, A, Salas, Ce
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://dx.doi.org/10.1590/S0074-02762001000600012
http://repositorio.unifesp.br/handle/11600/1226
Resumo: Diagnosis of the Mycobacterium tuberculosis complex by direct PCR of mediastinal lymphnode DNA and microbiological tests were compared in cattle suspicious of bearing tuberculous-like lesions detected during slaughter. The PCR procedure applied on DNA samples (n=54) obtained by adding alpha -casein into the thiocyanate extraction mix was positive in 70% of the samples. PCR confirmed the identification of 23 samples (100%) that grew in culture, 9 samples (60%) that failed to grow in culture, plus 6 (37.5%) samples that resulted in growth of bacterial contaminants. Genotyping by IS6110-RFLP and DR-spoligotyping analysis of seven samples revealed the presence of several polimorphisms. Seven of the isolates contained multiple copies of IS6110, thus defining the existence of five singular genotypes.
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spelling Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphismMycobacterium bovis diagnosisDNA polimorphismthiocyanate guanidiniumBrazilDiagnosis of the Mycobacterium tuberculosis complex by direct PCR of mediastinal lymphnode DNA and microbiological tests were compared in cattle suspicious of bearing tuberculous-like lesions detected during slaughter. The PCR procedure applied on DNA samples (n=54) obtained by adding alpha -casein into the thiocyanate extraction mix was positive in 70% of the samples. PCR confirmed the identification of 23 samples (100%) that grew in culture, 9 samples (60%) that failed to grow in culture, plus 6 (37.5%) samples that resulted in growth of bacterial contaminants. Genotyping by IS6110-RFLP and DR-spoligotyping analysis of seven samples revealed the presence of several polimorphisms. Seven of the isolates contained multiple copies of IS6110, thus defining the existence of five singular genotypes.ICB Departamento de Bioquímica e Imunologia Laboratório de Biologia Molecular de Produtos NaturaisUniversidade Federal de Minas Gerais ICB Escola de VeterináriaUniversidade Federal de Minas Gerais ICB Departamento de FarmacologiaEscola Paulista de Medicina Departamento de Microbiologia e ParasitologiaLaboratório Central do Estado do Espírito SantoInstituto Biológico de São PauloCentro de Investigación en Ciencias Veterinarias Instituto de BiotecnologiaUNIFESP, EPM, Depto. de Microbiologia e ParasitologiaSciELOInstituto Oswaldo Cruz, Ministério da SaúdeICB Departamento de Bioquímica e Imunologia Laboratório de Biologia Molecular de Produtos NaturaisUniversidade Federal de Minas Gerais ICB Escola de VeterináriaUniversidade Federal de Minas Gerais ICB Departamento de FarmacologiaUniversidade Federal de São Paulo (UNIFESP)Laboratório Central do Estado do Espírito SantoInstituto Biológico de São PauloCentro de Investigación en Ciencias Veterinarias Instituto de BiotecnologiaZanini, MsMoreira, EcLopes, MtpOliveira, Rs [UNIFESP]Leao, Sylvia Cardoso [UNIFESP]Fioravanti, RlRoxo, EZumarraga, MRomano, MiCataldi, ASalas, Ce2015-06-14T13:29:28Z2015-06-14T13:29:28Z2001-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion809-813application/pdfhttp://dx.doi.org/10.1590/S0074-02762001000600012Memórias do Instituto Oswaldo Cruz. Instituto Oswaldo Cruz, Ministério da Saúde, v. 96, n. 6, p. 809-813, 2001.10.1590/S0074-02762001000600012S0074-02762001000600012.pdf0074-0276S0074-02762001000600012http://repositorio.unifesp.br/handle/11600/1226engMemórias do Instituto Oswaldo Cruzinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-08-05T21:00:06Zoai:repositorio.unifesp.br/:11600/1226Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-08-05T21:00:06Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
title Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
spellingShingle Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
Zanini, Ms
Mycobacterium bovis diagnosis
DNA polimorphism
thiocyanate guanidinium
Brazil
title_short Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
title_full Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
title_fullStr Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
title_full_unstemmed Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
title_sort Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism
author Zanini, Ms
author_facet Zanini, Ms
Moreira, Ec
Lopes, Mtp
Oliveira, Rs [UNIFESP]
Leao, Sylvia Cardoso [UNIFESP]
Fioravanti, Rl
Roxo, E
Zumarraga, M
Romano, Mi
Cataldi, A
Salas, Ce
author_role author
author2 Moreira, Ec
Lopes, Mtp
Oliveira, Rs [UNIFESP]
Leao, Sylvia Cardoso [UNIFESP]
Fioravanti, Rl
Roxo, E
Zumarraga, M
Romano, Mi
Cataldi, A
Salas, Ce
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ICB Departamento de Bioquímica e Imunologia Laboratório de Biologia Molecular de Produtos Naturais
Universidade Federal de Minas Gerais ICB Escola de Veterinária
Universidade Federal de Minas Gerais ICB Departamento de Farmacologia
Universidade Federal de São Paulo (UNIFESP)
Laboratório Central do Estado do Espírito Santo
Instituto Biológico de São Paulo
Centro de Investigación en Ciencias Veterinarias Instituto de Biotecnologia
dc.contributor.author.fl_str_mv Zanini, Ms
Moreira, Ec
Lopes, Mtp
Oliveira, Rs [UNIFESP]
Leao, Sylvia Cardoso [UNIFESP]
Fioravanti, Rl
Roxo, E
Zumarraga, M
Romano, Mi
Cataldi, A
Salas, Ce
dc.subject.por.fl_str_mv Mycobacterium bovis diagnosis
DNA polimorphism
thiocyanate guanidinium
Brazil
topic Mycobacterium bovis diagnosis
DNA polimorphism
thiocyanate guanidinium
Brazil
description Diagnosis of the Mycobacterium tuberculosis complex by direct PCR of mediastinal lymphnode DNA and microbiological tests were compared in cattle suspicious of bearing tuberculous-like lesions detected during slaughter. The PCR procedure applied on DNA samples (n=54) obtained by adding alpha -casein into the thiocyanate extraction mix was positive in 70% of the samples. PCR confirmed the identification of 23 samples (100%) that grew in culture, 9 samples (60%) that failed to grow in culture, plus 6 (37.5%) samples that resulted in growth of bacterial contaminants. Genotyping by IS6110-RFLP and DR-spoligotyping analysis of seven samples revealed the presence of several polimorphisms. Seven of the isolates contained multiple copies of IS6110, thus defining the existence of five singular genotypes.
publishDate 2001
dc.date.none.fl_str_mv 2001-08-01
2015-06-14T13:29:28Z
2015-06-14T13:29:28Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S0074-02762001000600012
Memórias do Instituto Oswaldo Cruz. Instituto Oswaldo Cruz, Ministério da Saúde, v. 96, n. 6, p. 809-813, 2001.
10.1590/S0074-02762001000600012
S0074-02762001000600012.pdf
0074-0276
S0074-02762001000600012
http://repositorio.unifesp.br/handle/11600/1226
url http://dx.doi.org/10.1590/S0074-02762001000600012
http://repositorio.unifesp.br/handle/11600/1226
identifier_str_mv Memórias do Instituto Oswaldo Cruz. Instituto Oswaldo Cruz, Ministério da Saúde, v. 96, n. 6, p. 809-813, 2001.
10.1590/S0074-02762001000600012
S0074-02762001000600012.pdf
0074-0276
S0074-02762001000600012
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Memórias do Instituto Oswaldo Cruz
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 809-813
application/pdf
dc.publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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