Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome

Detalhes bibliográficos
Autor(a) principal: Santos, Ingrid Nayara Marcelino [UNIFESP]
Data de Publicação: 2022
Outros Autores: Kurihara, Mariana Neri Lucas [UNIFESP], Santos, Fernanda Fernandes, Valiatti, Tiago Barcelos [UNIFESP], Silva, Juliana Thalita Paulino [UNIFESP], Pignatari, Antonio Carlos Campos [UNIFESP], Salles, Mauro Jose Costa [UNIFESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: https://doi.org/10.3390/microorganisms10061149
https://hdl.handle.net/11600/63955
Resumo: Staphylococcus spp. remain the leading biofilm-forming agents causing orthopedic im-plant-associated infections (OIAI). This is a descriptive study of phenotypic and genomic features identified in clinical isolates of S. aureus and coagulase-negative Staphylococcus (CoNS) recovered from OIAIs patients that progressed to treatment failure. Ten isolates were identified by matrix-time-of-flight laser-assisted desorption mass spectrometry (MALDI-TOF-MS) and tested for antibi-otic susceptibility and biofilm formation. Genotypic characteristics, including, MLST (Multi Locus Sequence Typing), SCCmec typing, virulence and resistance genes were assessed by whole-genome sequencing (WGS). All S. aureus harbored mecA, blaZ, and multiple resistance genes for aminogly-cosides and quinolones. All MRSA were strong biofilm producers harboring the complete icaADBC and icaR operon. Seven CoNS isolates comprising five species (S. epidermidis, S. haemolyticus, S. sci-uri, S. capitis and S. lugdunensis) were analyzed, with mecA gene detected in five isolates. S. haemoli-tycus (isolate 95), and S. lugdunensis were unable to form biofilm and did not harbor the complete icaADBCR operon. High variability of adhesion genes was detected, with atl, ebp, icaADBC operon, and IS256 being the most common. In conclusion, MRSA and CoNS isolates carrying genes for bio-film production, and resistance to β-lactam and aminoglycosides are associated with treatment fail-ure in OIAIs.
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spelling Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcomeStaphylococcus aureuscoagulase-negative StaphylococciBiofilmOrthopedic infectionsSonicationbacterial resistancewhole-genome sequencingStaphylococcus spp. remain the leading biofilm-forming agents causing orthopedic im-plant-associated infections (OIAI). This is a descriptive study of phenotypic and genomic features identified in clinical isolates of S. aureus and coagulase-negative Staphylococcus (CoNS) recovered from OIAIs patients that progressed to treatment failure. Ten isolates were identified by matrix-time-of-flight laser-assisted desorption mass spectrometry (MALDI-TOF-MS) and tested for antibi-otic susceptibility and biofilm formation. Genotypic characteristics, including, MLST (Multi Locus Sequence Typing), SCCmec typing, virulence and resistance genes were assessed by whole-genome sequencing (WGS). All S. aureus harbored mecA, blaZ, and multiple resistance genes for aminogly-cosides and quinolones. All MRSA were strong biofilm producers harboring the complete icaADBC and icaR operon. Seven CoNS isolates comprising five species (S. epidermidis, S. haemolyticus, S. sci-uri, S. capitis and S. lugdunensis) were analyzed, with mecA gene detected in five isolates. S. haemoli-tycus (isolate 95), and S. lugdunensis were unable to form biofilm and did not harbor the complete icaADBCR operon. High variability of adhesion genes was detected, with atl, ebp, icaADBC operon, and IS256 being the most common. In conclusion, MRSA and CoNS isolates carrying genes for bio-film production, and resistance to β-lactam and aminoglycosides are associated with treatment fail-ure in OIAIs.MDPIhttp://lattes.cnpq.br/7196518766323325http://lattes.cnpq.br/0214364156717092http://lattes.cnpq.br/6922450552975380http://lattes.cnpq.br/1570873280199853http://lattes.cnpq.br/9461346610553865http://lattes.cnpq.br/3119933864520484Santos, Ingrid Nayara Marcelino [UNIFESP]Kurihara, Mariana Neri Lucas [UNIFESP]Santos, Fernanda FernandesValiatti, Tiago Barcelos [UNIFESP]Silva, Juliana Thalita Paulino [UNIFESP]Pignatari, Antonio Carlos Campos [UNIFESP]Salles, Mauro Jose Costa [UNIFESP]2022-06-09T17:44:39Z2022-06-09T17:44:39Z2022-06-02info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://doi.org/10.3390/microorganisms1006114910.3390/microorganisms10061149https://hdl.handle.net/11600/63955engMicroorganismsinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-07-26T22:37:04Zoai:repositorio.unifesp.br/:11600/63955Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-07-26T22:37:04Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
title Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
spellingShingle Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
Santos, Ingrid Nayara Marcelino [UNIFESP]
Staphylococcus aureus
coagulase-negative Staphylococci
Biofilm
Orthopedic infections
Sonication
bacterial resistance
whole-genome sequencing
title_short Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
title_full Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
title_fullStr Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
title_full_unstemmed Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
title_sort Comparative phenotypic and genomic features of Staphylococci from sonication fluid of orthopedic implant-associated infections with poor outcome
author Santos, Ingrid Nayara Marcelino [UNIFESP]
author_facet Santos, Ingrid Nayara Marcelino [UNIFESP]
Kurihara, Mariana Neri Lucas [UNIFESP]
Santos, Fernanda Fernandes
Valiatti, Tiago Barcelos [UNIFESP]
Silva, Juliana Thalita Paulino [UNIFESP]
Pignatari, Antonio Carlos Campos [UNIFESP]
Salles, Mauro Jose Costa [UNIFESP]
author_role author
author2 Kurihara, Mariana Neri Lucas [UNIFESP]
Santos, Fernanda Fernandes
Valiatti, Tiago Barcelos [UNIFESP]
Silva, Juliana Thalita Paulino [UNIFESP]
Pignatari, Antonio Carlos Campos [UNIFESP]
Salles, Mauro Jose Costa [UNIFESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv http://lattes.cnpq.br/7196518766323325
http://lattes.cnpq.br/0214364156717092
http://lattes.cnpq.br/6922450552975380
http://lattes.cnpq.br/1570873280199853
http://lattes.cnpq.br/9461346610553865
http://lattes.cnpq.br/3119933864520484
dc.contributor.author.fl_str_mv Santos, Ingrid Nayara Marcelino [UNIFESP]
Kurihara, Mariana Neri Lucas [UNIFESP]
Santos, Fernanda Fernandes
Valiatti, Tiago Barcelos [UNIFESP]
Silva, Juliana Thalita Paulino [UNIFESP]
Pignatari, Antonio Carlos Campos [UNIFESP]
Salles, Mauro Jose Costa [UNIFESP]
dc.subject.por.fl_str_mv Staphylococcus aureus
coagulase-negative Staphylococci
Biofilm
Orthopedic infections
Sonication
bacterial resistance
whole-genome sequencing
topic Staphylococcus aureus
coagulase-negative Staphylococci
Biofilm
Orthopedic infections
Sonication
bacterial resistance
whole-genome sequencing
description Staphylococcus spp. remain the leading biofilm-forming agents causing orthopedic im-plant-associated infections (OIAI). This is a descriptive study of phenotypic and genomic features identified in clinical isolates of S. aureus and coagulase-negative Staphylococcus (CoNS) recovered from OIAIs patients that progressed to treatment failure. Ten isolates were identified by matrix-time-of-flight laser-assisted desorption mass spectrometry (MALDI-TOF-MS) and tested for antibi-otic susceptibility and biofilm formation. Genotypic characteristics, including, MLST (Multi Locus Sequence Typing), SCCmec typing, virulence and resistance genes were assessed by whole-genome sequencing (WGS). All S. aureus harbored mecA, blaZ, and multiple resistance genes for aminogly-cosides and quinolones. All MRSA were strong biofilm producers harboring the complete icaADBC and icaR operon. Seven CoNS isolates comprising five species (S. epidermidis, S. haemolyticus, S. sci-uri, S. capitis and S. lugdunensis) were analyzed, with mecA gene detected in five isolates. S. haemoli-tycus (isolate 95), and S. lugdunensis were unable to form biofilm and did not harbor the complete icaADBCR operon. High variability of adhesion genes was detected, with atl, ebp, icaADBC operon, and IS256 being the most common. In conclusion, MRSA and CoNS isolates carrying genes for bio-film production, and resistance to β-lactam and aminoglycosides are associated with treatment fail-ure in OIAIs.
publishDate 2022
dc.date.none.fl_str_mv 2022-06-09T17:44:39Z
2022-06-09T17:44:39Z
2022-06-02
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://doi.org/10.3390/microorganisms10061149
10.3390/microorganisms10061149
https://hdl.handle.net/11600/63955
url https://doi.org/10.3390/microorganisms10061149
https://hdl.handle.net/11600/63955
identifier_str_mv 10.3390/microorganisms10061149
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Microorganisms
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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