Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers

Detalhes bibliográficos
Autor(a) principal: Arashiro, Patricia
Data de Publicação: 2009
Outros Autores: Eisenberg, Iris, Kho, Alvin T., Cerqueira, Antonia M. P., Canovas, Marta, Silva, Helga Cristina Almeida da [UNIFESP], Pavanello, Rita C. M., Verjovski-Almeida, Sergio, Kunkel, Louis M., Zatz, Mayana
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://dx.doi.org/10.1073/pnas.0901573106
http://repositorio.unifesp.br/handle/11600/31455
Resumo: Facioscapulohumeral muscular dystrophy (FSHD) is a progressive muscle disorder that has been associated with a contraction of 3.3-kb repeats on chromosome 4q35. FSHD is characterized by a wide clinical inter- and intrafamilial variability, ranging from wheelchair-bound patients to asymptomatic carriers. Our study is unique in comparing the gene expression profiles from related affected, asymptomatic carrier, and control individuals. Our results suggest that the expression of genes on chromosome 4q is altered in affected and asymptomatic individuals. Remarkably, the changes seen in asymptomatic samples are largely in products of genes encoding several chemokines, whereas the changes seen in affected samples are largely in genes governing the synthesis of GPI-linked proteins and histone acetylation. Besides this, the affected patient and related asymptomatic carrier share the 4qA161 haplotype. Thus, these polymorphisms by themselves do not explain the pathogenicity of the contracted allele. Interestingly, our results also suggest that the miRNAs might mediate the regulatory network in FSHD. Together, our results support the previous evidence that FSHD may be caused by transcriptional dysregulation of multiple genes, in cis and in trans, and suggest some factors potentially important for FSHD pathogenesis. the study of the gene expression profiles from asymptomatic carriers and related affected patients is a unique approach to try to enhance our understanding of the missing link between the contraction in D4Z4 repeats and muscle disease, while minimizing the effects of differences resulting from genetic background.
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spelling Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriersexpression profilingmicroarrayskeletal muscleFacioscapulohumeral muscular dystrophy (FSHD) is a progressive muscle disorder that has been associated with a contraction of 3.3-kb repeats on chromosome 4q35. FSHD is characterized by a wide clinical inter- and intrafamilial variability, ranging from wheelchair-bound patients to asymptomatic carriers. Our study is unique in comparing the gene expression profiles from related affected, asymptomatic carrier, and control individuals. Our results suggest that the expression of genes on chromosome 4q is altered in affected and asymptomatic individuals. Remarkably, the changes seen in asymptomatic samples are largely in products of genes encoding several chemokines, whereas the changes seen in affected samples are largely in genes governing the synthesis of GPI-linked proteins and histone acetylation. Besides this, the affected patient and related asymptomatic carrier share the 4qA161 haplotype. Thus, these polymorphisms by themselves do not explain the pathogenicity of the contracted allele. Interestingly, our results also suggest that the miRNAs might mediate the regulatory network in FSHD. Together, our results support the previous evidence that FSHD may be caused by transcriptional dysregulation of multiple genes, in cis and in trans, and suggest some factors potentially important for FSHD pathogenesis. the study of the gene expression profiles from asymptomatic carriers and related affected patients is a unique approach to try to enhance our understanding of the missing link between the contraction in D4Z4 repeats and muscle disease, while minimizing the effects of differences resulting from genetic background.Univ São Paulo, Human Genome Res Ctr, Inst Biosci, Dept Genet & Evolut Biol, BR-05508090 São Paulo, BrazilHoward Hughes Med Inst, Div Genet, Program Genom, Boston, MA 02115 USAHarvard Univ, Childrens Hosp, Sch Med, Informat Program, Boston, MA 02115 USAUniversidade Federal de São Paulo, Dept Surg, Discipline Anaesthesia Pain & Intens Care, Brazilian Ctr Study Diag & Invest Malignant Hyper, BR-04024002 São Paulo, BrazilUniv São Paulo, Inst Chem, Dept Biochem, BR-05508900 São Paulo, BrazilUniversidade Federal de São Paulo, Dept Surg, Discipline Anaesthesia Pain & Intens Care, Brazilian Ctr Study Diag & Invest Malignant Hyper, BR-04024002 São Paulo, BrazilWeb of ScienceNatl Acad SciencesUniversidade de São Paulo (USP)Howard Hughes Med InstHarvard UnivUniversidade Federal de São Paulo (UNIFESP)Arashiro, PatriciaEisenberg, IrisKho, Alvin T.Cerqueira, Antonia M. P.Canovas, MartaSilva, Helga Cristina Almeida da [UNIFESP]Pavanello, Rita C. M.Verjovski-Almeida, SergioKunkel, Louis M.Zatz, Mayana2016-01-24T13:52:27Z2016-01-24T13:52:27Z2009-04-14info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion6220-6225http://dx.doi.org/10.1073/pnas.0901573106Proceedings of the National Academy of Sciences of the United States of America. Washington: Natl Acad Sciences, v. 106, n. 15, p. 6220-6225, 2009.10.1073/pnas.09015731060027-8424http://repositorio.unifesp.br/handle/11600/31455WOS:000265174600036engProceedings of the National Academy of Sciences of the United States of Americainfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2023-02-15T11:46:39Zoai:repositorio.unifesp.br/:11600/31455Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652023-02-15T11:46:39Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
title Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
spellingShingle Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
Arashiro, Patricia
expression profiling
microarray
skeletal muscle
title_short Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
title_full Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
title_fullStr Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
title_full_unstemmed Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
title_sort Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
author Arashiro, Patricia
author_facet Arashiro, Patricia
Eisenberg, Iris
Kho, Alvin T.
Cerqueira, Antonia M. P.
Canovas, Marta
Silva, Helga Cristina Almeida da [UNIFESP]
Pavanello, Rita C. M.
Verjovski-Almeida, Sergio
Kunkel, Louis M.
Zatz, Mayana
author_role author
author2 Eisenberg, Iris
Kho, Alvin T.
Cerqueira, Antonia M. P.
Canovas, Marta
Silva, Helga Cristina Almeida da [UNIFESP]
Pavanello, Rita C. M.
Verjovski-Almeida, Sergio
Kunkel, Louis M.
Zatz, Mayana
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Howard Hughes Med Inst
Harvard Univ
Universidade Federal de São Paulo (UNIFESP)
dc.contributor.author.fl_str_mv Arashiro, Patricia
Eisenberg, Iris
Kho, Alvin T.
Cerqueira, Antonia M. P.
Canovas, Marta
Silva, Helga Cristina Almeida da [UNIFESP]
Pavanello, Rita C. M.
Verjovski-Almeida, Sergio
Kunkel, Louis M.
Zatz, Mayana
dc.subject.por.fl_str_mv expression profiling
microarray
skeletal muscle
topic expression profiling
microarray
skeletal muscle
description Facioscapulohumeral muscular dystrophy (FSHD) is a progressive muscle disorder that has been associated with a contraction of 3.3-kb repeats on chromosome 4q35. FSHD is characterized by a wide clinical inter- and intrafamilial variability, ranging from wheelchair-bound patients to asymptomatic carriers. Our study is unique in comparing the gene expression profiles from related affected, asymptomatic carrier, and control individuals. Our results suggest that the expression of genes on chromosome 4q is altered in affected and asymptomatic individuals. Remarkably, the changes seen in asymptomatic samples are largely in products of genes encoding several chemokines, whereas the changes seen in affected samples are largely in genes governing the synthesis of GPI-linked proteins and histone acetylation. Besides this, the affected patient and related asymptomatic carrier share the 4qA161 haplotype. Thus, these polymorphisms by themselves do not explain the pathogenicity of the contracted allele. Interestingly, our results also suggest that the miRNAs might mediate the regulatory network in FSHD. Together, our results support the previous evidence that FSHD may be caused by transcriptional dysregulation of multiple genes, in cis and in trans, and suggest some factors potentially important for FSHD pathogenesis. the study of the gene expression profiles from asymptomatic carriers and related affected patients is a unique approach to try to enhance our understanding of the missing link between the contraction in D4Z4 repeats and muscle disease, while minimizing the effects of differences resulting from genetic background.
publishDate 2009
dc.date.none.fl_str_mv 2009-04-14
2016-01-24T13:52:27Z
2016-01-24T13:52:27Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1073/pnas.0901573106
Proceedings of the National Academy of Sciences of the United States of America. Washington: Natl Acad Sciences, v. 106, n. 15, p. 6220-6225, 2009.
10.1073/pnas.0901573106
0027-8424
http://repositorio.unifesp.br/handle/11600/31455
WOS:000265174600036
url http://dx.doi.org/10.1073/pnas.0901573106
http://repositorio.unifesp.br/handle/11600/31455
identifier_str_mv Proceedings of the National Academy of Sciences of the United States of America. Washington: Natl Acad Sciences, v. 106, n. 15, p. 6220-6225, 2009.
10.1073/pnas.0901573106
0027-8424
WOS:000265174600036
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Proceedings of the National Academy of Sciences of the United States of America
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 6220-6225
dc.publisher.none.fl_str_mv Natl Acad Sciences
publisher.none.fl_str_mv Natl Acad Sciences
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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