Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers
Autor(a) principal: | |
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Data de Publicação: | 2009 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1073/pnas.0901573106 http://repositorio.unifesp.br/handle/11600/31455 |
Resumo: | Facioscapulohumeral muscular dystrophy (FSHD) is a progressive muscle disorder that has been associated with a contraction of 3.3-kb repeats on chromosome 4q35. FSHD is characterized by a wide clinical inter- and intrafamilial variability, ranging from wheelchair-bound patients to asymptomatic carriers. Our study is unique in comparing the gene expression profiles from related affected, asymptomatic carrier, and control individuals. Our results suggest that the expression of genes on chromosome 4q is altered in affected and asymptomatic individuals. Remarkably, the changes seen in asymptomatic samples are largely in products of genes encoding several chemokines, whereas the changes seen in affected samples are largely in genes governing the synthesis of GPI-linked proteins and histone acetylation. Besides this, the affected patient and related asymptomatic carrier share the 4qA161 haplotype. Thus, these polymorphisms by themselves do not explain the pathogenicity of the contracted allele. Interestingly, our results also suggest that the miRNAs might mediate the regulatory network in FSHD. Together, our results support the previous evidence that FSHD may be caused by transcriptional dysregulation of multiple genes, in cis and in trans, and suggest some factors potentially important for FSHD pathogenesis. the study of the gene expression profiles from asymptomatic carriers and related affected patients is a unique approach to try to enhance our understanding of the missing link between the contraction in D4Z4 repeats and muscle disease, while minimizing the effects of differences resulting from genetic background. |
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Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriersexpression profilingmicroarrayskeletal muscleFacioscapulohumeral muscular dystrophy (FSHD) is a progressive muscle disorder that has been associated with a contraction of 3.3-kb repeats on chromosome 4q35. FSHD is characterized by a wide clinical inter- and intrafamilial variability, ranging from wheelchair-bound patients to asymptomatic carriers. Our study is unique in comparing the gene expression profiles from related affected, asymptomatic carrier, and control individuals. Our results suggest that the expression of genes on chromosome 4q is altered in affected and asymptomatic individuals. Remarkably, the changes seen in asymptomatic samples are largely in products of genes encoding several chemokines, whereas the changes seen in affected samples are largely in genes governing the synthesis of GPI-linked proteins and histone acetylation. Besides this, the affected patient and related asymptomatic carrier share the 4qA161 haplotype. Thus, these polymorphisms by themselves do not explain the pathogenicity of the contracted allele. Interestingly, our results also suggest that the miRNAs might mediate the regulatory network in FSHD. Together, our results support the previous evidence that FSHD may be caused by transcriptional dysregulation of multiple genes, in cis and in trans, and suggest some factors potentially important for FSHD pathogenesis. the study of the gene expression profiles from asymptomatic carriers and related affected patients is a unique approach to try to enhance our understanding of the missing link between the contraction in D4Z4 repeats and muscle disease, while minimizing the effects of differences resulting from genetic background.Univ São Paulo, Human Genome Res Ctr, Inst Biosci, Dept Genet & Evolut Biol, BR-05508090 São Paulo, BrazilHoward Hughes Med Inst, Div Genet, Program Genom, Boston, MA 02115 USAHarvard Univ, Childrens Hosp, Sch Med, Informat Program, Boston, MA 02115 USAUniversidade Federal de São Paulo, Dept Surg, Discipline Anaesthesia Pain & Intens Care, Brazilian Ctr Study Diag & Invest Malignant Hyper, BR-04024002 São Paulo, BrazilUniv São Paulo, Inst Chem, Dept Biochem, BR-05508900 São Paulo, BrazilUniversidade Federal de São Paulo, Dept Surg, Discipline Anaesthesia Pain & Intens Care, Brazilian Ctr Study Diag & Invest Malignant Hyper, BR-04024002 São Paulo, BrazilWeb of ScienceNatl Acad SciencesUniversidade de São Paulo (USP)Howard Hughes Med InstHarvard UnivUniversidade Federal de São Paulo (UNIFESP)Arashiro, PatriciaEisenberg, IrisKho, Alvin T.Cerqueira, Antonia M. P.Canovas, MartaSilva, Helga Cristina Almeida da [UNIFESP]Pavanello, Rita C. M.Verjovski-Almeida, SergioKunkel, Louis M.Zatz, Mayana2016-01-24T13:52:27Z2016-01-24T13:52:27Z2009-04-14info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion6220-6225http://dx.doi.org/10.1073/pnas.0901573106Proceedings of the National Academy of Sciences of the United States of America. Washington: Natl Acad Sciences, v. 106, n. 15, p. 6220-6225, 2009.10.1073/pnas.09015731060027-8424http://repositorio.unifesp.br/handle/11600/31455WOS:000265174600036engProceedings of the National Academy of Sciences of the United States of Americainfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2023-02-15T11:46:39Zoai:repositorio.unifesp.br/:11600/31455Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652023-02-15T11:46:39Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
title |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
spellingShingle |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers Arashiro, Patricia expression profiling microarray skeletal muscle |
title_short |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
title_full |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
title_fullStr |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
title_full_unstemmed |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
title_sort |
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers |
author |
Arashiro, Patricia |
author_facet |
Arashiro, Patricia Eisenberg, Iris Kho, Alvin T. Cerqueira, Antonia M. P. Canovas, Marta Silva, Helga Cristina Almeida da [UNIFESP] Pavanello, Rita C. M. Verjovski-Almeida, Sergio Kunkel, Louis M. Zatz, Mayana |
author_role |
author |
author2 |
Eisenberg, Iris Kho, Alvin T. Cerqueira, Antonia M. P. Canovas, Marta Silva, Helga Cristina Almeida da [UNIFESP] Pavanello, Rita C. M. Verjovski-Almeida, Sergio Kunkel, Louis M. Zatz, Mayana |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) Howard Hughes Med Inst Harvard Univ Universidade Federal de São Paulo (UNIFESP) |
dc.contributor.author.fl_str_mv |
Arashiro, Patricia Eisenberg, Iris Kho, Alvin T. Cerqueira, Antonia M. P. Canovas, Marta Silva, Helga Cristina Almeida da [UNIFESP] Pavanello, Rita C. M. Verjovski-Almeida, Sergio Kunkel, Louis M. Zatz, Mayana |
dc.subject.por.fl_str_mv |
expression profiling microarray skeletal muscle |
topic |
expression profiling microarray skeletal muscle |
description |
Facioscapulohumeral muscular dystrophy (FSHD) is a progressive muscle disorder that has been associated with a contraction of 3.3-kb repeats on chromosome 4q35. FSHD is characterized by a wide clinical inter- and intrafamilial variability, ranging from wheelchair-bound patients to asymptomatic carriers. Our study is unique in comparing the gene expression profiles from related affected, asymptomatic carrier, and control individuals. Our results suggest that the expression of genes on chromosome 4q is altered in affected and asymptomatic individuals. Remarkably, the changes seen in asymptomatic samples are largely in products of genes encoding several chemokines, whereas the changes seen in affected samples are largely in genes governing the synthesis of GPI-linked proteins and histone acetylation. Besides this, the affected patient and related asymptomatic carrier share the 4qA161 haplotype. Thus, these polymorphisms by themselves do not explain the pathogenicity of the contracted allele. Interestingly, our results also suggest that the miRNAs might mediate the regulatory network in FSHD. Together, our results support the previous evidence that FSHD may be caused by transcriptional dysregulation of multiple genes, in cis and in trans, and suggest some factors potentially important for FSHD pathogenesis. the study of the gene expression profiles from asymptomatic carriers and related affected patients is a unique approach to try to enhance our understanding of the missing link between the contraction in D4Z4 repeats and muscle disease, while minimizing the effects of differences resulting from genetic background. |
publishDate |
2009 |
dc.date.none.fl_str_mv |
2009-04-14 2016-01-24T13:52:27Z 2016-01-24T13:52:27Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1073/pnas.0901573106 Proceedings of the National Academy of Sciences of the United States of America. Washington: Natl Acad Sciences, v. 106, n. 15, p. 6220-6225, 2009. 10.1073/pnas.0901573106 0027-8424 http://repositorio.unifesp.br/handle/11600/31455 WOS:000265174600036 |
url |
http://dx.doi.org/10.1073/pnas.0901573106 http://repositorio.unifesp.br/handle/11600/31455 |
identifier_str_mv |
Proceedings of the National Academy of Sciences of the United States of America. Washington: Natl Acad Sciences, v. 106, n. 15, p. 6220-6225, 2009. 10.1073/pnas.0901573106 0027-8424 WOS:000265174600036 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Proceedings of the National Academy of Sciences of the United States of America |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
6220-6225 |
dc.publisher.none.fl_str_mv |
Natl Acad Sciences |
publisher.none.fl_str_mv |
Natl Acad Sciences |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268337731928064 |