Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço

Detalhes bibliográficos
Autor(a) principal: Londe, Luciana Nogueira
Data de Publicação: 2010
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFU
Texto Completo: https://repositorio.ufu.br/handle/123456789/15707
Resumo: CHAPTER II: Pequi, Caryocar brasiliense, is one of the species of highlight at the biome of the Brazilian savannah due to its utilization in culinary, popular medicine, industry in general, and iron and steel industry. It presents an elevated index of exploration, being capable of entering the list of the endangered species. In the region of São José do Xingu (MT), a tree of pequi without thorn at the mesocarp was found and this enables to improve pequi not only for consumption, taking advantage of the high appreciation it already has. To detect the existing genomic differences between the pequi with and without the thorn at the endocarp, RADP markers were utilized. The generated polymorphisms were cloned and sequenced in order to identify the sequences responsible for the fenotypical alteration. It was observed that the pequi without thorn is genetically isolated from the other populations of pequi with thorn at the endocarp, proving that this characteristic is related to the genetic divergence of the species. Analysis in BLASTn evidenced the similarity of the Dof1 genes of Zea mays, in the population with thorn, and in the population without thorn, with the gene of phosphinotricin acetyl transferase of Z. mays. In the analysis of BLASTx, the similarity was verified with the proteins responsible for the deficiency in ferric reductase 4, in the pequi without thorn and catalase, in the pequi without thorn. CHAPTER III:The pequi, Cayocar brasiliense Cambess. Is a feature of Brazilian cerrado plant suffering extractive action, mainly for food. It is a plant very appreciated in the regions of Minas Gerais, especially in the north of this state. In the region of Sao Jose do Xingu, Mato Grosso, was found in a plant which had no thorns in the core and this allowed further research to discover the lack of thorns as it is an unwanted feature of the plant. Thus, the cytogenetic study, using conventional Giemsa staining, NOR, banda C, DAPI and CMA3 were used for comparison between the pequi with and without spines in the putamen. It was found that these differences are not attributed to chromosomal differences between the two types of pequi. Both have the same chromosome number, the marking of NOR, C banding was not verified due to the size of chromosomes and differences in staining with DAPI and CMA3 could not be verified although related to these characteristics. CHAPTER IV: The pequi is a species that is gathered and today is seen as a source for the production of biodiesel. The objective of this study was to identify sequences from a cDNA library that are involved in the metabolic pathways for production of pequi fruit, to gain a better understanding of the species and its biological and genetic properties. To do so, a cDNA library was created and the clones were cloned and sequenced. These identified sequences were deposited in GenBank. Most of the sequences found are associated with protection against oxidative stress in plants, some are transcription factors and others provide structural and pathogenic resistance.
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spelling Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroçoCaryocar brasiliensePequiEspinhoRAPDCaroçoGiemsaBanda CNORDAPICMA3EST sBiologia molecularPequi - CitogenéticaThornCNPQ::CIENCIAS BIOLOGICAS::GENETICACHAPTER II: Pequi, Caryocar brasiliense, is one of the species of highlight at the biome of the Brazilian savannah due to its utilization in culinary, popular medicine, industry in general, and iron and steel industry. It presents an elevated index of exploration, being capable of entering the list of the endangered species. In the region of São José do Xingu (MT), a tree of pequi without thorn at the mesocarp was found and this enables to improve pequi not only for consumption, taking advantage of the high appreciation it already has. To detect the existing genomic differences between the pequi with and without the thorn at the endocarp, RADP markers were utilized. The generated polymorphisms were cloned and sequenced in order to identify the sequences responsible for the fenotypical alteration. It was observed that the pequi without thorn is genetically isolated from the other populations of pequi with thorn at the endocarp, proving that this characteristic is related to the genetic divergence of the species. Analysis in BLASTn evidenced the similarity of the Dof1 genes of Zea mays, in the population with thorn, and in the population without thorn, with the gene of phosphinotricin acetyl transferase of Z. mays. In the analysis of BLASTx, the similarity was verified with the proteins responsible for the deficiency in ferric reductase 4, in the pequi without thorn and catalase, in the pequi without thorn. CHAPTER III:The pequi, Cayocar brasiliense Cambess. Is a feature of Brazilian cerrado plant suffering extractive action, mainly for food. It is a plant very appreciated in the regions of Minas Gerais, especially in the north of this state. In the region of Sao Jose do Xingu, Mato Grosso, was found in a plant which had no thorns in the core and this allowed further research to discover the lack of thorns as it is an unwanted feature of the plant. Thus, the cytogenetic study, using conventional Giemsa staining, NOR, banda C, DAPI and CMA3 were used for comparison between the pequi with and without spines in the putamen. It was found that these differences are not attributed to chromosomal differences between the two types of pequi. Both have the same chromosome number, the marking of NOR, C banding was not verified due to the size of chromosomes and differences in staining with DAPI and CMA3 could not be verified although related to these characteristics. CHAPTER IV: The pequi is a species that is gathered and today is seen as a source for the production of biodiesel. The objective of this study was to identify sequences from a cDNA library that are involved in the metabolic pathways for production of pequi fruit, to gain a better understanding of the species and its biological and genetic properties. To do so, a cDNA library was created and the clones were cloned and sequenced. These identified sequences were deposited in GenBank. Most of the sequences found are associated with protection against oxidative stress in plants, some are transcription factors and others provide structural and pathogenic resistance.Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorDoutor em Genética e BioquímicaCAPÍTULO II: O pequi, Caryocar brasiliense, é uma das espécies de destaque no bioma do Cerrado devido a sua utilização na culinária, medicina popular, indústria e siderurgia. Apresenta índice de exploração elevado, podendo entrar na lista das espécies ameaçadas de extinção. Na região de São José do Xingu (MT) foi encontrada uma árvore produzindo pequi sem espinho no endocarpo, o que levantou a possibilidade de melhorar o pequi para consumo aproveitando a alta apreciação que já possui. Com o objetivo de analisar as diferenças genômicas entre o pequi com e o sem espinho no endocarpo, utilizou-se marcadores RADP (Random Amplified Polymorphism DNA). As bandas polimórficas geradas foram isoladas, clonadas e seqüenciadas, buscando identificar sequências responsáveis pela alteração fenotípica. Observou-se que o pequi sem espinho fica isolado geneticamente das demais populações de pequi com espinho no caroço, comprovando que essa característica está relacionada à divergência genética da espécie. Análises em BLASTn mostraram a similaridade aos genes Dof1 de Zea mays, na população com espinho e com o gene da Acetiltransferase Fosfinotricina de Z. mays, na população sem espinho. As análises em BLASTx revelaram similaridade com as proteínas responsáveis pela Deficiência em Redutase Férrica 4, no pequi sem espinho e com catalase, no pequi com espinho. CAPÍTULO III: O pequizeiro, Cayocar brasiliense Cambess., é uma planta característica do cerrado brasileiro que sofre ação extrativista, principalmente, para a alimentação. É uma planta bastante apreciada em regiões de Minas Gerais, especialmente no Norte desse estado. Na região de São José do Xingu, Mato Grosso, foi encontrada uma planta produzindo pequi sem espinhos no caroço. O estudo citogenético, por meio de coloração convencional de Giemsa, NOR, banda C, DAPI e CMA3 foi utilizado para a comparação entre plantas produtoras de pequi com e sem espinhos no caroço. Verificou-se que essas diferenças não podem ser atribuídas à diferenças cromossômicas entre os dois tipos de pequi. Ambas as plantas têm o mesmo número cromossômico, mesma marcação de NOR. Não foi verificado bandeamento C devido ao tamanho dos cromossomos. Diferenças de coloração com DAPI e CMA3 foram detectadas, porém não é possível afirmar que estejam relacionadas com a presença ou ausência de espinhos no fruto. CAPÍTULO IV: O pequizeiro (Caryocar brasiliense Cambess.) é uma espécie nativa do cerrado brasilieiro e que possui importância alimentar e social para a população que dela depende. É uma espécie que sofre ação extrativista e que, atualmente, é considerada fonte para a produção de biodiesel. Nesse trabalho o objetivo foi identificar, a partir de uma bilbioteca de cDNA, seqüências que estejam envolvidas em vias metabólicas para produção do fruto do pequi, para conhecimento da espécie, suas propriedades biológicas e genéticas. Dessa forma foi construída biblioteca de cDNA e os clones foram clonados e seqüenciados. As sequências identificadas foram depositadas no GenBank. Algumas das sequências encontradas estão relacionadas à proteção contra o estresse oxidativo em plantas, outras são fatores de transcrição e algumas sequências expressas têm funções estruturais e de resistência a patógenos.Universidade Federal de UberlândiaBRPrograma de Pós-graduação em Genética e BioquímicaCiências BiológicasUFUKerr, Warwick Estevamhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783950T1Bonetti, Ana Mariahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783660P9Morelli, Sandrahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4789865U6Grisólia, César Koppehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4794762Z9Freitas, Danival Vieira dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4765092A9Londe, Luciana Nogueira2016-06-22T18:43:22Z2010-04-292016-06-22T18:43:22Z2010-02-23info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfapplication/pdfLONDE, Luciana Nogueira. Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço. 2010. 155 f. Tese (Doutorado em Ciências Biológicas) - Universidade Federal de Uberlândia, Uberlândia, 2010.https://repositorio.ufu.br/handle/123456789/15707porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFUinstname:Universidade Federal de Uberlândia (UFU)instacron:UFU2020-02-12T06:01:00Zoai:repositorio.ufu.br:123456789/15707Repositório InstitucionalONGhttp://repositorio.ufu.br/oai/requestdiinf@dirbi.ufu.bropendoar:2020-02-12T06:01Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)false
dc.title.none.fl_str_mv Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
title Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
spellingShingle Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
Londe, Luciana Nogueira
Caryocar brasiliense
Pequi
Espinho
RAPD
Caroço
Giemsa
Banda C
NOR
DAPI
CMA3
EST s
Biologia molecular
Pequi - Citogenética
Thorn
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
title_short Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
title_full Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
title_fullStr Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
title_full_unstemmed Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
title_sort Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço
author Londe, Luciana Nogueira
author_facet Londe, Luciana Nogueira
author_role author
dc.contributor.none.fl_str_mv Kerr, Warwick Estevam
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783950T1
Bonetti, Ana Maria
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783660P9
Morelli, Sandra
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4789865U6
Grisólia, César Koppe
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4794762Z9
Freitas, Danival Vieira de
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4765092A9
dc.contributor.author.fl_str_mv Londe, Luciana Nogueira
dc.subject.por.fl_str_mv Caryocar brasiliense
Pequi
Espinho
RAPD
Caroço
Giemsa
Banda C
NOR
DAPI
CMA3
EST s
Biologia molecular
Pequi - Citogenética
Thorn
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
topic Caryocar brasiliense
Pequi
Espinho
RAPD
Caroço
Giemsa
Banda C
NOR
DAPI
CMA3
EST s
Biologia molecular
Pequi - Citogenética
Thorn
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
description CHAPTER II: Pequi, Caryocar brasiliense, is one of the species of highlight at the biome of the Brazilian savannah due to its utilization in culinary, popular medicine, industry in general, and iron and steel industry. It presents an elevated index of exploration, being capable of entering the list of the endangered species. In the region of São José do Xingu (MT), a tree of pequi without thorn at the mesocarp was found and this enables to improve pequi not only for consumption, taking advantage of the high appreciation it already has. To detect the existing genomic differences between the pequi with and without the thorn at the endocarp, RADP markers were utilized. The generated polymorphisms were cloned and sequenced in order to identify the sequences responsible for the fenotypical alteration. It was observed that the pequi without thorn is genetically isolated from the other populations of pequi with thorn at the endocarp, proving that this characteristic is related to the genetic divergence of the species. Analysis in BLASTn evidenced the similarity of the Dof1 genes of Zea mays, in the population with thorn, and in the population without thorn, with the gene of phosphinotricin acetyl transferase of Z. mays. In the analysis of BLASTx, the similarity was verified with the proteins responsible for the deficiency in ferric reductase 4, in the pequi without thorn and catalase, in the pequi without thorn. CHAPTER III:The pequi, Cayocar brasiliense Cambess. Is a feature of Brazilian cerrado plant suffering extractive action, mainly for food. It is a plant very appreciated in the regions of Minas Gerais, especially in the north of this state. In the region of Sao Jose do Xingu, Mato Grosso, was found in a plant which had no thorns in the core and this allowed further research to discover the lack of thorns as it is an unwanted feature of the plant. Thus, the cytogenetic study, using conventional Giemsa staining, NOR, banda C, DAPI and CMA3 were used for comparison between the pequi with and without spines in the putamen. It was found that these differences are not attributed to chromosomal differences between the two types of pequi. Both have the same chromosome number, the marking of NOR, C banding was not verified due to the size of chromosomes and differences in staining with DAPI and CMA3 could not be verified although related to these characteristics. CHAPTER IV: The pequi is a species that is gathered and today is seen as a source for the production of biodiesel. The objective of this study was to identify sequences from a cDNA library that are involved in the metabolic pathways for production of pequi fruit, to gain a better understanding of the species and its biological and genetic properties. To do so, a cDNA library was created and the clones were cloned and sequenced. These identified sequences were deposited in GenBank. Most of the sequences found are associated with protection against oxidative stress in plants, some are transcription factors and others provide structural and pathogenic resistance.
publishDate 2010
dc.date.none.fl_str_mv 2010-04-29
2010-02-23
2016-06-22T18:43:22Z
2016-06-22T18:43:22Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv LONDE, Luciana Nogueira. Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço. 2010. 155 f. Tese (Doutorado em Ciências Biológicas) - Universidade Federal de Uberlândia, Uberlândia, 2010.
https://repositorio.ufu.br/handle/123456789/15707
identifier_str_mv LONDE, Luciana Nogueira. Caracterização molecular e citogenética de frutos de Caryocar brasiliense (Cambess) com e sem espinho no caroço. 2010. 155 f. Tese (Doutorado em Ciências Biológicas) - Universidade Federal de Uberlândia, Uberlândia, 2010.
url https://repositorio.ufu.br/handle/123456789/15707
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Uberlândia
BR
Programa de Pós-graduação em Genética e Bioquímica
Ciências Biológicas
UFU
publisher.none.fl_str_mv Universidade Federal de Uberlândia
BR
Programa de Pós-graduação em Genética e Bioquímica
Ciências Biológicas
UFU
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFU
instname:Universidade Federal de Uberlândia (UFU)
instacron:UFU
instname_str Universidade Federal de Uberlândia (UFU)
instacron_str UFU
institution UFU
reponame_str Repositório Institucional da UFU
collection Repositório Institucional da UFU
repository.name.fl_str_mv Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)
repository.mail.fl_str_mv diinf@dirbi.ufu.br
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