Characterization of indicator tree species in neotropical environments and implications for geological mapping

Detalhes bibliográficos
Autor(a) principal: Amaral, Cibele Hummel do
Data de Publicação: 2018
Outros Autores: Almeida, Teodoro Isnard Ribeiro de, Souza Filho, Carlos Roberto de, Roberts, Dar A., Fraser, Stephen James, Alves, Marcos Nopper, Botelho, Moreno
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://doi.org/10.1016/j.rse.2018.07.009
http://www.locus.ufv.br/handle/123456789/22394
Resumo: Geobotanical remote sensing (GbRS) in the strict sense is an indirect approach to obtain geological information in heavily vegetated areas for mineral prospecting and geological mapping. Using ultra- and hyperspectral technologies, the goals of this research comprise the definition and mapping of Neotropical tree species that are associated with geological facies (here called geo-environments) as well as their spectral discrimination at leaf and crown scales. This work also aims to investigate the possible relationship between leaf and crown spectral and chemical properties. The study was developed at the Mogi-Guaçu Ecological Station, in the Cerrado domain, southeastern Brazil. Data from 70 sample units, such as sediment texture and species from inventories, were first analyzed through vectorial quantization using Self-Organizing Maps (SOM). Principal Component Analysis and Spearman's ranked correlation coefficients were used to define geo-environments and target-species, respectively. Biochemical and visible to shortwave infrared (VSWIR) point spectral data (350–2500 nm) were collected from the leaves of the target-species, during both rainy and dry seasons. Spectral data from target-species crowns were obtained from hyperspectral images (530–2.532 nm, ProSpecTIR-VS sensor) with 1 m spatial resolution, and acquired in the beginning of the dry season. These spectra were classified using Multiple Endmember Spectral Mixture Analysis (MESMA) with two endmembers (EMs). Based on the MESMA results with two EMs, the best dataset per target-species was chosen for pixel-based image unmixing with three EMs (target-species, other vegetation types and shade). From 121 species sampled in the field, two proved to be associated with floodplains (Alluvial Deposits sequence), two with hills and plateaus of the Aquidauna Formation (Carboniferous sedimentary rocks, Paraná Basin), and two more with a specific facies of the Aquidauna Formation that has a distinctive presence of coarse and very coarse sand. Five target-species were well discriminated at the leaf scale, reaching 90.0% and 85.0% of global accuracies in the rainy season and in the dry season, respectively. Accurate spectral discrimination appears to be linked to the considerable biochemical variability of their leaves in both seasons. Three species were discriminated at the crown scale, with 70.6% of global accuracy. When eight other landscape scale vegetation classes were included in the analyses, only Qualea grandiflora Mart. produced a satisfactory accuracy (61.1% and 100% of producer and user's accuracies, respectively). The spatial distribution of its fraction in the unmixed image, particularly, matches with the geological facies to which it was associated in the field. Ecological requirements for successfully mapping indicator species include broad and random distribution of the target-species' population, and singular physiological, phenological (and spectral) behavior at the imagery acquisition date. Our study shows that, even in tropical conditions, it is possible to use plant species mapping to support geological delineation, where rock exposures are typically rare.
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spelling Amaral, Cibele Hummel doAlmeida, Teodoro Isnard Ribeiro deSouza Filho, Carlos Roberto deRoberts, Dar A.Fraser, Stephen JamesAlves, Marcos NopperBotelho, Moreno2018-10-25T10:36:47Z2018-10-25T10:36:47Z2018-07-170034-4257https://doi.org/10.1016/j.rse.2018.07.009http://www.locus.ufv.br/handle/123456789/22394Geobotanical remote sensing (GbRS) in the strict sense is an indirect approach to obtain geological information in heavily vegetated areas for mineral prospecting and geological mapping. Using ultra- and hyperspectral technologies, the goals of this research comprise the definition and mapping of Neotropical tree species that are associated with geological facies (here called geo-environments) as well as their spectral discrimination at leaf and crown scales. This work also aims to investigate the possible relationship between leaf and crown spectral and chemical properties. The study was developed at the Mogi-Guaçu Ecological Station, in the Cerrado domain, southeastern Brazil. Data from 70 sample units, such as sediment texture and species from inventories, were first analyzed through vectorial quantization using Self-Organizing Maps (SOM). Principal Component Analysis and Spearman's ranked correlation coefficients were used to define geo-environments and target-species, respectively. Biochemical and visible to shortwave infrared (VSWIR) point spectral data (350–2500 nm) were collected from the leaves of the target-species, during both rainy and dry seasons. Spectral data from target-species crowns were obtained from hyperspectral images (530–2.532 nm, ProSpecTIR-VS sensor) with 1 m spatial resolution, and acquired in the beginning of the dry season. These spectra were classified using Multiple Endmember Spectral Mixture Analysis (MESMA) with two endmembers (EMs). Based on the MESMA results with two EMs, the best dataset per target-species was chosen for pixel-based image unmixing with three EMs (target-species, other vegetation types and shade). From 121 species sampled in the field, two proved to be associated with floodplains (Alluvial Deposits sequence), two with hills and plateaus of the Aquidauna Formation (Carboniferous sedimentary rocks, Paraná Basin), and two more with a specific facies of the Aquidauna Formation that has a distinctive presence of coarse and very coarse sand. Five target-species were well discriminated at the leaf scale, reaching 90.0% and 85.0% of global accuracies in the rainy season and in the dry season, respectively. Accurate spectral discrimination appears to be linked to the considerable biochemical variability of their leaves in both seasons. Three species were discriminated at the crown scale, with 70.6% of global accuracy. When eight other landscape scale vegetation classes were included in the analyses, only Qualea grandiflora Mart. produced a satisfactory accuracy (61.1% and 100% of producer and user's accuracies, respectively). The spatial distribution of its fraction in the unmixed image, particularly, matches with the geological facies to which it was associated in the field. Ecological requirements for successfully mapping indicator species include broad and random distribution of the target-species' population, and singular physiological, phenological (and spectral) behavior at the imagery acquisition date. Our study shows that, even in tropical conditions, it is possible to use plant species mapping to support geological delineation, where rock exposures are typically rare.engRemote Sensing of EnvironmentVolume 216, Pages 385-400, October 2018Elsevier B. V.info:eu-repo/semantics/openAccessGeobotanyCerrado biomeSedimentary formationsMultivariate analysisSpectroscopySpectral mixture analysisCharacterization of indicator tree species in neotropical environments and implications for geological mappinginfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdfTexto completoapplication/pdf2579564https://locus.ufv.br//bitstream/123456789/22394/1/artigo.pdf1ef28c7b02868b8bd0cd86d72420d3f5MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/22394/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/223942018-10-25 07:38:43.327oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-10-25T10:38:43LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Characterization of indicator tree species in neotropical environments and implications for geological mapping
title Characterization of indicator tree species in neotropical environments and implications for geological mapping
spellingShingle Characterization of indicator tree species in neotropical environments and implications for geological mapping
Amaral, Cibele Hummel do
Geobotany
Cerrado biome
Sedimentary formations
Multivariate analysis
Spectroscopy
Spectral mixture analysis
title_short Characterization of indicator tree species in neotropical environments and implications for geological mapping
title_full Characterization of indicator tree species in neotropical environments and implications for geological mapping
title_fullStr Characterization of indicator tree species in neotropical environments and implications for geological mapping
title_full_unstemmed Characterization of indicator tree species in neotropical environments and implications for geological mapping
title_sort Characterization of indicator tree species in neotropical environments and implications for geological mapping
author Amaral, Cibele Hummel do
author_facet Amaral, Cibele Hummel do
Almeida, Teodoro Isnard Ribeiro de
Souza Filho, Carlos Roberto de
Roberts, Dar A.
Fraser, Stephen James
Alves, Marcos Nopper
Botelho, Moreno
author_role author
author2 Almeida, Teodoro Isnard Ribeiro de
Souza Filho, Carlos Roberto de
Roberts, Dar A.
Fraser, Stephen James
Alves, Marcos Nopper
Botelho, Moreno
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Amaral, Cibele Hummel do
Almeida, Teodoro Isnard Ribeiro de
Souza Filho, Carlos Roberto de
Roberts, Dar A.
Fraser, Stephen James
Alves, Marcos Nopper
Botelho, Moreno
dc.subject.pt-BR.fl_str_mv Geobotany
Cerrado biome
Sedimentary formations
Multivariate analysis
Spectroscopy
Spectral mixture analysis
topic Geobotany
Cerrado biome
Sedimentary formations
Multivariate analysis
Spectroscopy
Spectral mixture analysis
description Geobotanical remote sensing (GbRS) in the strict sense is an indirect approach to obtain geological information in heavily vegetated areas for mineral prospecting and geological mapping. Using ultra- and hyperspectral technologies, the goals of this research comprise the definition and mapping of Neotropical tree species that are associated with geological facies (here called geo-environments) as well as their spectral discrimination at leaf and crown scales. This work also aims to investigate the possible relationship between leaf and crown spectral and chemical properties. The study was developed at the Mogi-Guaçu Ecological Station, in the Cerrado domain, southeastern Brazil. Data from 70 sample units, such as sediment texture and species from inventories, were first analyzed through vectorial quantization using Self-Organizing Maps (SOM). Principal Component Analysis and Spearman's ranked correlation coefficients were used to define geo-environments and target-species, respectively. Biochemical and visible to shortwave infrared (VSWIR) point spectral data (350–2500 nm) were collected from the leaves of the target-species, during both rainy and dry seasons. Spectral data from target-species crowns were obtained from hyperspectral images (530–2.532 nm, ProSpecTIR-VS sensor) with 1 m spatial resolution, and acquired in the beginning of the dry season. These spectra were classified using Multiple Endmember Spectral Mixture Analysis (MESMA) with two endmembers (EMs). Based on the MESMA results with two EMs, the best dataset per target-species was chosen for pixel-based image unmixing with three EMs (target-species, other vegetation types and shade). From 121 species sampled in the field, two proved to be associated with floodplains (Alluvial Deposits sequence), two with hills and plateaus of the Aquidauna Formation (Carboniferous sedimentary rocks, Paraná Basin), and two more with a specific facies of the Aquidauna Formation that has a distinctive presence of coarse and very coarse sand. Five target-species were well discriminated at the leaf scale, reaching 90.0% and 85.0% of global accuracies in the rainy season and in the dry season, respectively. Accurate spectral discrimination appears to be linked to the considerable biochemical variability of their leaves in both seasons. Three species were discriminated at the crown scale, with 70.6% of global accuracy. When eight other landscape scale vegetation classes were included in the analyses, only Qualea grandiflora Mart. produced a satisfactory accuracy (61.1% and 100% of producer and user's accuracies, respectively). The spatial distribution of its fraction in the unmixed image, particularly, matches with the geological facies to which it was associated in the field. Ecological requirements for successfully mapping indicator species include broad and random distribution of the target-species' population, and singular physiological, phenological (and spectral) behavior at the imagery acquisition date. Our study shows that, even in tropical conditions, it is possible to use plant species mapping to support geological delineation, where rock exposures are typically rare.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-10-25T10:36:47Z
dc.date.available.fl_str_mv 2018-10-25T10:36:47Z
dc.date.issued.fl_str_mv 2018-07-17
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv https://doi.org/10.1016/j.rse.2018.07.009
http://www.locus.ufv.br/handle/123456789/22394
dc.identifier.issn.none.fl_str_mv 0034-4257
identifier_str_mv 0034-4257
url https://doi.org/10.1016/j.rse.2018.07.009
http://www.locus.ufv.br/handle/123456789/22394
dc.language.iso.fl_str_mv eng
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dc.relation.ispartofseries.pt-BR.fl_str_mv Volume 216, Pages 385-400, October 2018
dc.rights.driver.fl_str_mv Elsevier B. V.
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