Thermostability improvement of Orpinomyces sp. xylanase by directed evolution
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | LOCUS Repositório Institucional da UFV |
Texto Completo: | https://doi.org/10.1016/j.molcatb.2012.04.021 http://www.locus.ufv.br/handle/123456789/21788 |
Resumo: | The methodology of directed evolution, using the mutagenic technique of error-prone PCR has been used to improve the thermostability of enzymes. This method was applied to the endo-β-1,4-xylanase from Orpinomyces strain PC-2. The constructed library of xylanase (xynA) mutants was subjected to several screening cycles in plates with azo-xylan-agarose as substrate and four thermostable mutants (M1–M4) were selected. Homology models for these thermostable mutants were constructed to identify the location of the residues changed by error-prone PCR and to investigate the effect of these mutations on the xylanase properties. Xylanase activities of the mutants and wild type were maximal at 60 °C and in the pH range of 5–7. The mutants displayed higher thermostability than the wild type XynA, where the wild type showed a half-life at 60 °C of 7.92 min, while half-life values for M1, M2, M3 and M4 were 209, 33.2, 401 and 15.3 min, respectively. Additionally, M3 and M4 presented a good performance in more extreme pH conditions. The mutants retained their ability to hydrolyze birchwood and oat spelt xylans, which are substrates presenting different degrees of branching. |
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LOCUS Repositório Institucional da UFV |
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Thermostability improvement of Orpinomyces sp. xylanase by directed evolutionError-prone PCRXylanaseThermostabilityOrpinomycesThe methodology of directed evolution, using the mutagenic technique of error-prone PCR has been used to improve the thermostability of enzymes. This method was applied to the endo-β-1,4-xylanase from Orpinomyces strain PC-2. The constructed library of xylanase (xynA) mutants was subjected to several screening cycles in plates with azo-xylan-agarose as substrate and four thermostable mutants (M1–M4) were selected. Homology models for these thermostable mutants were constructed to identify the location of the residues changed by error-prone PCR and to investigate the effect of these mutations on the xylanase properties. Xylanase activities of the mutants and wild type were maximal at 60 °C and in the pH range of 5–7. The mutants displayed higher thermostability than the wild type XynA, where the wild type showed a half-life at 60 °C of 7.92 min, while half-life values for M1, M2, M3 and M4 were 209, 33.2, 401 and 15.3 min, respectively. Additionally, M3 and M4 presented a good performance in more extreme pH conditions. The mutants retained their ability to hydrolyze birchwood and oat spelt xylans, which are substrates presenting different degrees of branching.Journal of Molecular Catalysis B: Enzymatic2018-09-12T19:08:21Z2018-09-12T19:08:21Z2012-09info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlepdfapplication/pdf13811177https://doi.org/10.1016/j.molcatb.2012.04.021http://www.locus.ufv.br/handle/123456789/21788engv. 81, p. 12- 18, set. 2012Elsevier B.V.info:eu-repo/semantics/openAccessTrevizano, Larissa MattosVentorim, Rafaela ZandonadeRezende, Sebastião Tavares deSilva Junior, Floriano PaesGuimarães, Valéria Montezereponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-07-12T07:12:54Zoai:locus.ufv.br:123456789/21788Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-07-12T07:12:54LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false |
dc.title.none.fl_str_mv |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
title |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
spellingShingle |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution Trevizano, Larissa Mattos Error-prone PCR Xylanase Thermostability Orpinomyces |
title_short |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
title_full |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
title_fullStr |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
title_full_unstemmed |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
title_sort |
Thermostability improvement of Orpinomyces sp. xylanase by directed evolution |
author |
Trevizano, Larissa Mattos |
author_facet |
Trevizano, Larissa Mattos Ventorim, Rafaela Zandonade Rezende, Sebastião Tavares de Silva Junior, Floriano Paes Guimarães, Valéria Monteze |
author_role |
author |
author2 |
Ventorim, Rafaela Zandonade Rezende, Sebastião Tavares de Silva Junior, Floriano Paes Guimarães, Valéria Monteze |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Trevizano, Larissa Mattos Ventorim, Rafaela Zandonade Rezende, Sebastião Tavares de Silva Junior, Floriano Paes Guimarães, Valéria Monteze |
dc.subject.por.fl_str_mv |
Error-prone PCR Xylanase Thermostability Orpinomyces |
topic |
Error-prone PCR Xylanase Thermostability Orpinomyces |
description |
The methodology of directed evolution, using the mutagenic technique of error-prone PCR has been used to improve the thermostability of enzymes. This method was applied to the endo-β-1,4-xylanase from Orpinomyces strain PC-2. The constructed library of xylanase (xynA) mutants was subjected to several screening cycles in plates with azo-xylan-agarose as substrate and four thermostable mutants (M1–M4) were selected. Homology models for these thermostable mutants were constructed to identify the location of the residues changed by error-prone PCR and to investigate the effect of these mutations on the xylanase properties. Xylanase activities of the mutants and wild type were maximal at 60 °C and in the pH range of 5–7. The mutants displayed higher thermostability than the wild type XynA, where the wild type showed a half-life at 60 °C of 7.92 min, while half-life values for M1, M2, M3 and M4 were 209, 33.2, 401 and 15.3 min, respectively. Additionally, M3 and M4 presented a good performance in more extreme pH conditions. The mutants retained their ability to hydrolyze birchwood and oat spelt xylans, which are substrates presenting different degrees of branching. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012-09 2018-09-12T19:08:21Z 2018-09-12T19:08:21Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
13811177 https://doi.org/10.1016/j.molcatb.2012.04.021 http://www.locus.ufv.br/handle/123456789/21788 |
identifier_str_mv |
13811177 |
url |
https://doi.org/10.1016/j.molcatb.2012.04.021 http://www.locus.ufv.br/handle/123456789/21788 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
v. 81, p. 12- 18, set. 2012 |
dc.rights.driver.fl_str_mv |
Elsevier B.V. info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Elsevier B.V. |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
pdf application/pdf |
dc.publisher.none.fl_str_mv |
Journal of Molecular Catalysis B: Enzymatic |
publisher.none.fl_str_mv |
Journal of Molecular Catalysis B: Enzymatic |
dc.source.none.fl_str_mv |
reponame:LOCUS Repositório Institucional da UFV instname:Universidade Federal de Viçosa (UFV) instacron:UFV |
instname_str |
Universidade Federal de Viçosa (UFV) |
instacron_str |
UFV |
institution |
UFV |
reponame_str |
LOCUS Repositório Institucional da UFV |
collection |
LOCUS Repositório Institucional da UFV |
repository.name.fl_str_mv |
LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV) |
repository.mail.fl_str_mv |
fabiojreis@ufv.br |
_version_ |
1822610612928118784 |