Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora

Detalhes bibliográficos
Autor(a) principal: Yotoko, Karla S. C.
Data de Publicação: 2011
Outros Autores: Dornelas, Marcelo C., Togni, Pakisa D., Fonseca, Tamara C., Salzano, Francisco M., Bonatto, Sandro L., Freitas, Loreta B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0018212
http://www.locus.ufv.br/handle/123456789/12190
Resumo: One of the long-standing paradoxes in genomic evolution is the observation that much of the genome is composed of repetitive DNA which has been typically regarded as superfluous to the function of the genome in generating phenotypes. In this work, we used comparative phylogenetic approaches to investigate if the variations in genome sizes (GS) should be considered as adaptive or neutral processes by the comparison between GS and flower diameters (FD) of 50 Passiflora species, more specifically, within its two most species-rich subgenera, Passiflora and Decaloba. For this, we have constructed a phylogenetic tree of these species, estimated GS and FD of them, inferred the tempo and mode of evolution of these traits and their correlations, using both current and phylogenetically independent contrasted values. We found significant correlations among the traits, when considering the complete set of data or only the subgenus Passiflora, whereas no correlations were observed within Decaloba. Herein, we present convincing evidence of adaptive evolution of GS, as well as clues that this pattern is limited by a minimum genome size, which could reduce both the possibilities of changes in GS and the possibility of phenotypic responses to environment changes.
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spelling Yotoko, Karla S. C.Dornelas, Marcelo C.Togni, Pakisa D.Fonseca, Tamara C.Salzano, Francisco M.Bonatto, Sandro L.Freitas, Loreta B.2017-10-19T14:51:22Z2017-10-19T14:51:22Z2011-03-281932-6203http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0018212http://www.locus.ufv.br/handle/123456789/12190One of the long-standing paradoxes in genomic evolution is the observation that much of the genome is composed of repetitive DNA which has been typically regarded as superfluous to the function of the genome in generating phenotypes. In this work, we used comparative phylogenetic approaches to investigate if the variations in genome sizes (GS) should be considered as adaptive or neutral processes by the comparison between GS and flower diameters (FD) of 50 Passiflora species, more specifically, within its two most species-rich subgenera, Passiflora and Decaloba. For this, we have constructed a phylogenetic tree of these species, estimated GS and FD of them, inferred the tempo and mode of evolution of these traits and their correlations, using both current and phylogenetically independent contrasted values. We found significant correlations among the traits, when considering the complete set of data or only the subgenus Passiflora, whereas no correlations were observed within Decaloba. Herein, we present convincing evidence of adaptive evolution of GS, as well as clues that this pattern is limited by a minimum genome size, which could reduce both the possibilities of changes in GS and the possibility of phenotypic responses to environment changes.engPLOS ONEVolume 6, Issue 3, e18212, March 2011Variation - GenomeAdaptive or neutral processesPassifloraDoes variation in genome sizes reflect adaptive or neutral processes? 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dc.title.en.fl_str_mv Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
spellingShingle Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
Yotoko, Karla S. C.
Variation - Genome
Adaptive or neutral processes
Passiflora
title_short Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_full Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_fullStr Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_full_unstemmed Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_sort Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
author Yotoko, Karla S. C.
author_facet Yotoko, Karla S. C.
Dornelas, Marcelo C.
Togni, Pakisa D.
Fonseca, Tamara C.
Salzano, Francisco M.
Bonatto, Sandro L.
Freitas, Loreta B.
author_role author
author2 Dornelas, Marcelo C.
Togni, Pakisa D.
Fonseca, Tamara C.
Salzano, Francisco M.
Bonatto, Sandro L.
Freitas, Loreta B.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Yotoko, Karla S. C.
Dornelas, Marcelo C.
Togni, Pakisa D.
Fonseca, Tamara C.
Salzano, Francisco M.
Bonatto, Sandro L.
Freitas, Loreta B.
dc.subject.pt-BR.fl_str_mv Variation - Genome
Adaptive or neutral processes
Passiflora
topic Variation - Genome
Adaptive or neutral processes
Passiflora
description One of the long-standing paradoxes in genomic evolution is the observation that much of the genome is composed of repetitive DNA which has been typically regarded as superfluous to the function of the genome in generating phenotypes. In this work, we used comparative phylogenetic approaches to investigate if the variations in genome sizes (GS) should be considered as adaptive or neutral processes by the comparison between GS and flower diameters (FD) of 50 Passiflora species, more specifically, within its two most species-rich subgenera, Passiflora and Decaloba. For this, we have constructed a phylogenetic tree of these species, estimated GS and FD of them, inferred the tempo and mode of evolution of these traits and their correlations, using both current and phylogenetically independent contrasted values. We found significant correlations among the traits, when considering the complete set of data or only the subgenus Passiflora, whereas no correlations were observed within Decaloba. Herein, we present convincing evidence of adaptive evolution of GS, as well as clues that this pattern is limited by a minimum genome size, which could reduce both the possibilities of changes in GS and the possibility of phenotypic responses to environment changes.
publishDate 2011
dc.date.issued.fl_str_mv 2011-03-28
dc.date.accessioned.fl_str_mv 2017-10-19T14:51:22Z
dc.date.available.fl_str_mv 2017-10-19T14:51:22Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0018212
http://www.locus.ufv.br/handle/123456789/12190
dc.identifier.issn.none.fl_str_mv 1932-6203
identifier_str_mv 1932-6203
url http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0018212
http://www.locus.ufv.br/handle/123456789/12190
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv Volume 6, Issue 3, e18212, March 2011
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publisher.none.fl_str_mv PLOS ONE
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