Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora

Detalhes bibliográficos
Autor(a) principal: Yokoto, Karla S. C.
Data de Publicação: 2011
Outros Autores: Dornelas, Marcelo C., Togni, Pakisa Dagna, Fonseca, Tamara C., Salzano, Francisco Mauro, Bonatto, Sandro Luis, Freitas, Loreta Brandão de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/225298
Resumo: One of the long-standing paradoxes in genomic evolution is the observation that much of the genome is composed of repetitive DNA which has been typically regarded as superfluous to the function of the genome in generating phenotypes. In this work, we used comparative phylogenetic approaches to investigate if the variations in genome sizes (GS) should be considered as adaptive or neutral processes by the comparison between GS and flower diameters (FD) of 50 Passiflora species, more specifically, within its two most species-rich subgenera, Passiflora and Decaloba. For this, we have constructed a phylogenetic tree of these species, estimated GS and FD of them, inferred the tempo and mode of evolution of these traits and their correlations, using both current and phylogenetically independent contrasted values. We found significant correlations among the traits, when considering the complete set of data or only the subgenus Passiflora, whereas no correlations were observed within Decaloba. Herein, we present convincing evidence of adaptive evolution of GS, as well as clues that this pattern is limited by a minimum genome size, which could reduce both the possibilities of changes in GS and the possibility of phenotypic responses to environment changes.
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spelling Yokoto, Karla S. C.Dornelas, Marcelo C.Togni, Pakisa DagnaFonseca, Tamara C.Salzano, Francisco MauroBonatto, Sandro LuisFreitas, Loreta Brandão de2021-08-06T04:42:14Z20111932-6203http://hdl.handle.net/10183/225298000873804One of the long-standing paradoxes in genomic evolution is the observation that much of the genome is composed of repetitive DNA which has been typically regarded as superfluous to the function of the genome in generating phenotypes. In this work, we used comparative phylogenetic approaches to investigate if the variations in genome sizes (GS) should be considered as adaptive or neutral processes by the comparison between GS and flower diameters (FD) of 50 Passiflora species, more specifically, within its two most species-rich subgenera, Passiflora and Decaloba. For this, we have constructed a phylogenetic tree of these species, estimated GS and FD of them, inferred the tempo and mode of evolution of these traits and their correlations, using both current and phylogenetically independent contrasted values. We found significant correlations among the traits, when considering the complete set of data or only the subgenus Passiflora, whereas no correlations were observed within Decaloba. Herein, we present convincing evidence of adaptive evolution of GS, as well as clues that this pattern is limited by a minimum genome size, which could reduce both the possibilities of changes in GS and the possibility of phenotypic responses to environment changes.application/pdfengPLoS ONE. San Francisco. Vol. 6, no. 3 (Mar. 2011), e18212, 8 p.PassifloraFilogenéticaDoes variation in genome sizes reflect adaptive or neutral processes? New clues from PassifloraEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000873804.pdf.txt000873804.pdf.txtExtracted Texttext/plain44327http://www.lume.ufrgs.br/bitstream/10183/225298/2/000873804.pdf.txt20bf16ad2e3c6745948405ad2ac60f02MD52ORIGINAL000873804.pdfTexto completo (inglês)application/pdf308540http://www.lume.ufrgs.br/bitstream/10183/225298/1/000873804.pdffdb70a2ff23b1a974dc62ccb100bd09fMD5110183/2252982023-09-23 03:36:58.80498oai:www.lume.ufrgs.br:10183/225298Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-09-23T06:36:58Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
spellingShingle Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
Yokoto, Karla S. C.
Passiflora
Filogenética
title_short Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_full Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_fullStr Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_full_unstemmed Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
title_sort Does variation in genome sizes reflect adaptive or neutral processes? New clues from Passiflora
author Yokoto, Karla S. C.
author_facet Yokoto, Karla S. C.
Dornelas, Marcelo C.
Togni, Pakisa Dagna
Fonseca, Tamara C.
Salzano, Francisco Mauro
Bonatto, Sandro Luis
Freitas, Loreta Brandão de
author_role author
author2 Dornelas, Marcelo C.
Togni, Pakisa Dagna
Fonseca, Tamara C.
Salzano, Francisco Mauro
Bonatto, Sandro Luis
Freitas, Loreta Brandão de
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Yokoto, Karla S. C.
Dornelas, Marcelo C.
Togni, Pakisa Dagna
Fonseca, Tamara C.
Salzano, Francisco Mauro
Bonatto, Sandro Luis
Freitas, Loreta Brandão de
dc.subject.por.fl_str_mv Passiflora
Filogenética
topic Passiflora
Filogenética
description One of the long-standing paradoxes in genomic evolution is the observation that much of the genome is composed of repetitive DNA which has been typically regarded as superfluous to the function of the genome in generating phenotypes. In this work, we used comparative phylogenetic approaches to investigate if the variations in genome sizes (GS) should be considered as adaptive or neutral processes by the comparison between GS and flower diameters (FD) of 50 Passiflora species, more specifically, within its two most species-rich subgenera, Passiflora and Decaloba. For this, we have constructed a phylogenetic tree of these species, estimated GS and FD of them, inferred the tempo and mode of evolution of these traits and their correlations, using both current and phylogenetically independent contrasted values. We found significant correlations among the traits, when considering the complete set of data or only the subgenus Passiflora, whereas no correlations were observed within Decaloba. Herein, we present convincing evidence of adaptive evolution of GS, as well as clues that this pattern is limited by a minimum genome size, which could reduce both the possibilities of changes in GS and the possibility of phenotypic responses to environment changes.
publishDate 2011
dc.date.issued.fl_str_mv 2011
dc.date.accessioned.fl_str_mv 2021-08-06T04:42:14Z
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dc.identifier.issn.pt_BR.fl_str_mv 1932-6203
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dc.relation.ispartof.pt_BR.fl_str_mv PLoS ONE. San Francisco. Vol. 6, no. 3 (Mar. 2011), e18212, 8 p.
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