Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs

Detalhes bibliográficos
Autor(a) principal: Qi, Xiaoyi
Data de Publicação: 2020
Outros Autores: Xu, Yafei, Qin, Weiyun, Wang, Haifei, Wu, Shenglong, Bao, Wenbin
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://locus.ufv.br//handle/123456789/30279
https://doi.org/10.37496/rbz4920200064
Resumo: To screen intestinal barrier genes associated with porcine epidemic diarrhea virus (PEDV) infection, in the present study we first detected PEDV-infected piglets (Sus scrofa) with intestinal damage using quantitative real-time PCR (qPCR) and hematoxylin and eosin (HE) staining. Then, we used qPCR to identify expression differences of intestinal barrier genes between the PEDV-infected and control groups. The results showed that the expression levels of most genes were significantly different between the two groups. Hierarchical clustering and correlation analysis were performed for the expression levels of 25 candidate genes to reveal the key gene that may be involved in PEDV resistance. Two important candidate genes, GLP2 (glucagon– like peptide 2) and AQP3 (aquaporin 3), have their expression positively correlated (r = 0.84). We speculated that decreased expression of GLP2 and AQP3 might play an important role in the process of PEDV infection of piglets by reducing the expression of tight junction proteins and disrupting the junctions between intestinal epithelial cells. There may be an underlying biological interaction between the two genes, which together affect the functional integrity of the intestinal barrier
id UFV_643b5b7ef290538f449a9dcdfa164b98
oai_identifier_str oai:locus.ufv.br:123456789/30279
network_acronym_str UFV
network_name_str LOCUS Repositório Institucional da UFV
repository_id_str 2145
spelling Qi, XiaoyiXu, YafeiQin, WeiyunWang, HaifeiWu, ShenglongBao, Wenbin2022-12-20T18:21:01Z2022-12-20T18:21:01Z2020-11-18Qi, X.; Xu, Y.; Qin, W.; Wang, H.; Wu, S. and Bao, W. 2020. Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs. Revista Brasileira de Zootecnia 49:e202000641806-9290https://locus.ufv.br//handle/123456789/30279https://doi.org/10.37496/rbz4920200064To screen intestinal barrier genes associated with porcine epidemic diarrhea virus (PEDV) infection, in the present study we first detected PEDV-infected piglets (Sus scrofa) with intestinal damage using quantitative real-time PCR (qPCR) and hematoxylin and eosin (HE) staining. Then, we used qPCR to identify expression differences of intestinal barrier genes between the PEDV-infected and control groups. The results showed that the expression levels of most genes were significantly different between the two groups. Hierarchical clustering and correlation analysis were performed for the expression levels of 25 candidate genes to reveal the key gene that may be involved in PEDV resistance. Two important candidate genes, GLP2 (glucagon– like peptide 2) and AQP3 (aquaporin 3), have their expression positively correlated (r = 0.84). We speculated that decreased expression of GLP2 and AQP3 might play an important role in the process of PEDV infection of piglets by reducing the expression of tight junction proteins and disrupting the junctions between intestinal epithelial cells. There may be an underlying biological interaction between the two genes, which together affect the functional integrity of the intestinal barrierengBrazilian Journal of Animal ScienceR. Bras. Zootec., 49:e20200064, 2020Creative Commons Attribution Licenseinfo:eu-repo/semantics/openAccessgene expressionpigletquantitative real-time PCRPreliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlereponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINAL1806-9290-rbz-49-e20200064.pdf1806-9290-rbz-49-e20200064.pdfartigoapplication/pdf2184504https://locus.ufv.br//bitstream/123456789/30279/1/1806-9290-rbz-49-e20200064.pdf6a2271eb807ff8e08553e35f50b65ee9MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/30279/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/302792022-12-20 15:21:01.302oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452022-12-20T18:21:01LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
title Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
spellingShingle Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
Qi, Xiaoyi
gene expression
piglet
quantitative real-time PCR
title_short Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
title_full Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
title_fullStr Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
title_full_unstemmed Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
title_sort Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs
author Qi, Xiaoyi
author_facet Qi, Xiaoyi
Xu, Yafei
Qin, Weiyun
Wang, Haifei
Wu, Shenglong
Bao, Wenbin
author_role author
author2 Xu, Yafei
Qin, Weiyun
Wang, Haifei
Wu, Shenglong
Bao, Wenbin
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Qi, Xiaoyi
Xu, Yafei
Qin, Weiyun
Wang, Haifei
Wu, Shenglong
Bao, Wenbin
dc.subject.eng.fl_str_mv gene expression
piglet
quantitative real-time PCR
topic gene expression
piglet
quantitative real-time PCR
description To screen intestinal barrier genes associated with porcine epidemic diarrhea virus (PEDV) infection, in the present study we first detected PEDV-infected piglets (Sus scrofa) with intestinal damage using quantitative real-time PCR (qPCR) and hematoxylin and eosin (HE) staining. Then, we used qPCR to identify expression differences of intestinal barrier genes between the PEDV-infected and control groups. The results showed that the expression levels of most genes were significantly different between the two groups. Hierarchical clustering and correlation analysis were performed for the expression levels of 25 candidate genes to reveal the key gene that may be involved in PEDV resistance. Two important candidate genes, GLP2 (glucagon– like peptide 2) and AQP3 (aquaporin 3), have their expression positively correlated (r = 0.84). We speculated that decreased expression of GLP2 and AQP3 might play an important role in the process of PEDV infection of piglets by reducing the expression of tight junction proteins and disrupting the junctions between intestinal epithelial cells. There may be an underlying biological interaction between the two genes, which together affect the functional integrity of the intestinal barrier
publishDate 2020
dc.date.issued.fl_str_mv 2020-11-18
dc.date.accessioned.fl_str_mv 2022-12-20T18:21:01Z
dc.date.available.fl_str_mv 2022-12-20T18:21:01Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv Qi, X.; Xu, Y.; Qin, W.; Wang, H.; Wu, S. and Bao, W. 2020. Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs. Revista Brasileira de Zootecnia 49:e20200064
dc.identifier.uri.fl_str_mv https://locus.ufv.br//handle/123456789/30279
dc.identifier.issn.none.fl_str_mv 1806-9290
dc.identifier.doi.pt-BR.fl_str_mv https://doi.org/10.37496/rbz4920200064
identifier_str_mv Qi, X.; Xu, Y.; Qin, W.; Wang, H.; Wu, S. and Bao, W. 2020. Preliminary screening of intestinal barrier genes associated with porcine epidemic diarrhea virus infection in pigs. Revista Brasileira de Zootecnia 49:e20200064
1806-9290
url https://locus.ufv.br//handle/123456789/30279
https://doi.org/10.37496/rbz4920200064
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv R. Bras. Zootec., 49:e20200064, 2020
dc.rights.driver.fl_str_mv Creative Commons Attribution License
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Creative Commons Attribution License
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Brazilian Journal of Animal Science
publisher.none.fl_str_mv Brazilian Journal of Animal Science
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str LOCUS Repositório Institucional da UFV
collection LOCUS Repositório Institucional da UFV
bitstream.url.fl_str_mv https://locus.ufv.br//bitstream/123456789/30279/1/1806-9290-rbz-49-e20200064.pdf
https://locus.ufv.br//bitstream/123456789/30279/2/license.txt
bitstream.checksum.fl_str_mv 6a2271eb807ff8e08553e35f50b65ee9
8a4605be74aa9ea9d79846c1fba20a33
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
repository.name.fl_str_mv LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv fabiojreis@ufv.br
_version_ 1801213063974617088