Genetic diversity of ‘ubá’ mango tree using ISSR markers
Autor(a) principal: | |
---|---|
Data de Publicação: | 2011 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | LOCUS Repositório Institucional da UFV |
Texto Completo: | http://dx.doi.org/10.1007/s12033-011-9419-1 http://www.locus.ufv.br/handle/123456789/21518 |
Resumo: | In this study, the genetic diversity of ‘Ubá’ mango trees cultivated at the Zona da Mata of Minas Gerais State, Brazil, was assessed, to identify whether there is variability in the plants grown in the region, justifying the mass selection as a breeding method. We used 102 accessions. Leaves were collected for extraction of genomic DNA, which was amplified with nine ISSR primers. The data obtained by the analysis of electrophoretic patterns were arranged in a binary matrix, considering 0 for the absence and 1 for the presence of bands. Based on these data, we performed the analysis of genetic dissimilarity and carried out the cluster analysis by the methods of Tocher and graphical dispersion. The most similar accessions are 144 and 150, both coming from Ubá, while the most divergent ones are 29 and 97, from Visconde do Rio Branco. The grouping by the Tocher method separated the accessions into six groups, 94.1% of which were allocated in the first group and showed that there is no separation of accessions depending on the sampling sites. The 3D scatter plot reinforces this conclusion. There is genetic variability among the accessions of ‘Ubá’ mango tree evaluated. Therefore, it is possible to make mass selection in open-pollinated populations. |
id |
UFV_65424d0905b0655098d035fd158db220 |
---|---|
oai_identifier_str |
oai:locus.ufv.br:123456789/21518 |
network_acronym_str |
UFV |
network_name_str |
LOCUS Repositório Institucional da UFV |
repository_id_str |
2145 |
spelling |
Salomão, Luiz Carlos ChamhumRocha, AlineSalomão, Tânia Maria FernandesCruz, Cosme DamiãoSiqueira, Dalmo Lopes de2018-08-29T17:01:04Z2018-08-29T17:01:04Z2011-06-051559-0305http://dx.doi.org/10.1007/s12033-011-9419-1http://www.locus.ufv.br/handle/123456789/21518In this study, the genetic diversity of ‘Ubá’ mango trees cultivated at the Zona da Mata of Minas Gerais State, Brazil, was assessed, to identify whether there is variability in the plants grown in the region, justifying the mass selection as a breeding method. We used 102 accessions. Leaves were collected for extraction of genomic DNA, which was amplified with nine ISSR primers. The data obtained by the analysis of electrophoretic patterns were arranged in a binary matrix, considering 0 for the absence and 1 for the presence of bands. Based on these data, we performed the analysis of genetic dissimilarity and carried out the cluster analysis by the methods of Tocher and graphical dispersion. The most similar accessions are 144 and 150, both coming from Ubá, while the most divergent ones are 29 and 97, from Visconde do Rio Branco. The grouping by the Tocher method separated the accessions into six groups, 94.1% of which were allocated in the first group and showed that there is no separation of accessions depending on the sampling sites. The 3D scatter plot reinforces this conclusion. There is genetic variability among the accessions of ‘Ubá’ mango tree evaluated. Therefore, it is possible to make mass selection in open-pollinated populations.engRevista CeresVolume 50, Issue 2, p. 108–113, February 2012Springer Science+Business Media, LLC 2011info:eu-repo/semantics/openAccessMangifera indica L.Genetic variabilityMass selectionJaccard indexPolyembryonyGenetic diversity of ‘ubá’ mango tree using ISSR markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdfTexto completoapplication/pdf214134https://locus.ufv.br//bitstream/123456789/21518/1/artigo.pdf9e7e81e5199012f6a952ca195e7d1ec7MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/21518/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILartigo.pdf.jpgartigo.pdf.jpgIM Thumbnailimage/jpeg4970https://locus.ufv.br//bitstream/123456789/21518/3/artigo.pdf.jpg06c07c73d47d047b10a695beed66f7e4MD53123456789/215182018-08-29 23:00:40.595oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-08-30T02:00:40LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false |
dc.title.en.fl_str_mv |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
title |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
spellingShingle |
Genetic diversity of ‘ubá’ mango tree using ISSR markers Salomão, Luiz Carlos Chamhum Mangifera indica L. Genetic variability Mass selection Jaccard index Polyembryony |
title_short |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
title_full |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
title_fullStr |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
title_full_unstemmed |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
title_sort |
Genetic diversity of ‘ubá’ mango tree using ISSR markers |
author |
Salomão, Luiz Carlos Chamhum |
author_facet |
Salomão, Luiz Carlos Chamhum Rocha, Aline Salomão, Tânia Maria Fernandes Cruz, Cosme Damião Siqueira, Dalmo Lopes de |
author_role |
author |
author2 |
Rocha, Aline Salomão, Tânia Maria Fernandes Cruz, Cosme Damião Siqueira, Dalmo Lopes de |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Salomão, Luiz Carlos Chamhum Rocha, Aline Salomão, Tânia Maria Fernandes Cruz, Cosme Damião Siqueira, Dalmo Lopes de |
dc.subject.pt-BR.fl_str_mv |
Mangifera indica L. Genetic variability Mass selection Jaccard index Polyembryony |
topic |
Mangifera indica L. Genetic variability Mass selection Jaccard index Polyembryony |
description |
In this study, the genetic diversity of ‘Ubá’ mango trees cultivated at the Zona da Mata of Minas Gerais State, Brazil, was assessed, to identify whether there is variability in the plants grown in the region, justifying the mass selection as a breeding method. We used 102 accessions. Leaves were collected for extraction of genomic DNA, which was amplified with nine ISSR primers. The data obtained by the analysis of electrophoretic patterns were arranged in a binary matrix, considering 0 for the absence and 1 for the presence of bands. Based on these data, we performed the analysis of genetic dissimilarity and carried out the cluster analysis by the methods of Tocher and graphical dispersion. The most similar accessions are 144 and 150, both coming from Ubá, while the most divergent ones are 29 and 97, from Visconde do Rio Branco. The grouping by the Tocher method separated the accessions into six groups, 94.1% of which were allocated in the first group and showed that there is no separation of accessions depending on the sampling sites. The 3D scatter plot reinforces this conclusion. There is genetic variability among the accessions of ‘Ubá’ mango tree evaluated. Therefore, it is possible to make mass selection in open-pollinated populations. |
publishDate |
2011 |
dc.date.issued.fl_str_mv |
2011-06-05 |
dc.date.accessioned.fl_str_mv |
2018-08-29T17:01:04Z |
dc.date.available.fl_str_mv |
2018-08-29T17:01:04Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s12033-011-9419-1 http://www.locus.ufv.br/handle/123456789/21518 |
dc.identifier.issn.none.fl_str_mv |
1559-0305 |
identifier_str_mv |
1559-0305 |
url |
http://dx.doi.org/10.1007/s12033-011-9419-1 http://www.locus.ufv.br/handle/123456789/21518 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofseries.pt-BR.fl_str_mv |
Volume 50, Issue 2, p. 108–113, February 2012 |
dc.rights.driver.fl_str_mv |
Springer Science+Business Media, LLC 2011 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Springer Science+Business Media, LLC 2011 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Revista Ceres |
publisher.none.fl_str_mv |
Revista Ceres |
dc.source.none.fl_str_mv |
reponame:LOCUS Repositório Institucional da UFV instname:Universidade Federal de Viçosa (UFV) instacron:UFV |
instname_str |
Universidade Federal de Viçosa (UFV) |
instacron_str |
UFV |
institution |
UFV |
reponame_str |
LOCUS Repositório Institucional da UFV |
collection |
LOCUS Repositório Institucional da UFV |
bitstream.url.fl_str_mv |
https://locus.ufv.br//bitstream/123456789/21518/1/artigo.pdf https://locus.ufv.br//bitstream/123456789/21518/2/license.txt https://locus.ufv.br//bitstream/123456789/21518/3/artigo.pdf.jpg |
bitstream.checksum.fl_str_mv |
9e7e81e5199012f6a952ca195e7d1ec7 8a4605be74aa9ea9d79846c1fba20a33 06c07c73d47d047b10a695beed66f7e4 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV) |
repository.mail.fl_str_mv |
fabiojreis@ufv.br |
_version_ |
1801212925138960384 |