Genetic diversity of ‘ubá’ mango tree using ISSR markers

Detalhes bibliográficos
Autor(a) principal: Salomão, Luiz Carlos Chamhum
Data de Publicação: 2011
Outros Autores: Rocha, Aline, Salomão, Tânia Maria Fernandes, Cruz, Cosme Damião, Siqueira, Dalmo Lopes de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://dx.doi.org/10.1007/s12033-011-9419-1
http://www.locus.ufv.br/handle/123456789/21518
Resumo: In this study, the genetic diversity of ‘Ubá’ mango trees cultivated at the Zona da Mata of Minas Gerais State, Brazil, was assessed, to identify whether there is variability in the plants grown in the region, justifying the mass selection as a breeding method. We used 102 accessions. Leaves were collected for extraction of genomic DNA, which was amplified with nine ISSR primers. The data obtained by the analysis of electrophoretic patterns were arranged in a binary matrix, considering 0 for the absence and 1 for the presence of bands. Based on these data, we performed the analysis of genetic dissimilarity and carried out the cluster analysis by the methods of Tocher and graphical dispersion. The most similar accessions are 144 and 150, both coming from Ubá, while the most divergent ones are 29 and 97, from Visconde do Rio Branco. The grouping by the Tocher method separated the accessions into six groups, 94.1% of which were allocated in the first group and showed that there is no separation of accessions depending on the sampling sites. The 3D scatter plot reinforces this conclusion. There is genetic variability among the accessions of ‘Ubá’ mango tree evaluated. Therefore, it is possible to make mass selection in open-pollinated populations.
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spelling Salomão, Luiz Carlos ChamhumRocha, AlineSalomão, Tânia Maria FernandesCruz, Cosme DamiãoSiqueira, Dalmo Lopes de2018-08-29T17:01:04Z2018-08-29T17:01:04Z2011-06-051559-0305http://dx.doi.org/10.1007/s12033-011-9419-1http://www.locus.ufv.br/handle/123456789/21518In this study, the genetic diversity of ‘Ubá’ mango trees cultivated at the Zona da Mata of Minas Gerais State, Brazil, was assessed, to identify whether there is variability in the plants grown in the region, justifying the mass selection as a breeding method. We used 102 accessions. Leaves were collected for extraction of genomic DNA, which was amplified with nine ISSR primers. The data obtained by the analysis of electrophoretic patterns were arranged in a binary matrix, considering 0 for the absence and 1 for the presence of bands. Based on these data, we performed the analysis of genetic dissimilarity and carried out the cluster analysis by the methods of Tocher and graphical dispersion. The most similar accessions are 144 and 150, both coming from Ubá, while the most divergent ones are 29 and 97, from Visconde do Rio Branco. The grouping by the Tocher method separated the accessions into six groups, 94.1% of which were allocated in the first group and showed that there is no separation of accessions depending on the sampling sites. The 3D scatter plot reinforces this conclusion. There is genetic variability among the accessions of ‘Ubá’ mango tree evaluated. Therefore, it is possible to make mass selection in open-pollinated populations.engRevista CeresVolume 50, Issue 2, p. 108–113, February 2012Springer Science+Business Media, LLC 2011info:eu-repo/semantics/openAccessMangifera indica L.Genetic variabilityMass selectionJaccard indexPolyembryonyGenetic diversity of ‘ubá’ mango tree using ISSR markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdfTexto completoapplication/pdf214134https://locus.ufv.br//bitstream/123456789/21518/1/artigo.pdf9e7e81e5199012f6a952ca195e7d1ec7MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/21518/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILartigo.pdf.jpgartigo.pdf.jpgIM Thumbnailimage/jpeg4970https://locus.ufv.br//bitstream/123456789/21518/3/artigo.pdf.jpg06c07c73d47d047b10a695beed66f7e4MD53123456789/215182018-08-29 23:00:40.595oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-08-30T02:00:40LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Genetic diversity of ‘ubá’ mango tree using ISSR markers
title Genetic diversity of ‘ubá’ mango tree using ISSR markers
spellingShingle Genetic diversity of ‘ubá’ mango tree using ISSR markers
Salomão, Luiz Carlos Chamhum
Mangifera indica L.
Genetic variability
Mass selection
Jaccard index
Polyembryony
title_short Genetic diversity of ‘ubá’ mango tree using ISSR markers
title_full Genetic diversity of ‘ubá’ mango tree using ISSR markers
title_fullStr Genetic diversity of ‘ubá’ mango tree using ISSR markers
title_full_unstemmed Genetic diversity of ‘ubá’ mango tree using ISSR markers
title_sort Genetic diversity of ‘ubá’ mango tree using ISSR markers
author Salomão, Luiz Carlos Chamhum
author_facet Salomão, Luiz Carlos Chamhum
Rocha, Aline
Salomão, Tânia Maria Fernandes
Cruz, Cosme Damião
Siqueira, Dalmo Lopes de
author_role author
author2 Rocha, Aline
Salomão, Tânia Maria Fernandes
Cruz, Cosme Damião
Siqueira, Dalmo Lopes de
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Salomão, Luiz Carlos Chamhum
Rocha, Aline
Salomão, Tânia Maria Fernandes
Cruz, Cosme Damião
Siqueira, Dalmo Lopes de
dc.subject.pt-BR.fl_str_mv Mangifera indica L.
Genetic variability
Mass selection
Jaccard index
Polyembryony
topic Mangifera indica L.
Genetic variability
Mass selection
Jaccard index
Polyembryony
description In this study, the genetic diversity of ‘Ubá’ mango trees cultivated at the Zona da Mata of Minas Gerais State, Brazil, was assessed, to identify whether there is variability in the plants grown in the region, justifying the mass selection as a breeding method. We used 102 accessions. Leaves were collected for extraction of genomic DNA, which was amplified with nine ISSR primers. The data obtained by the analysis of electrophoretic patterns were arranged in a binary matrix, considering 0 for the absence and 1 for the presence of bands. Based on these data, we performed the analysis of genetic dissimilarity and carried out the cluster analysis by the methods of Tocher and graphical dispersion. The most similar accessions are 144 and 150, both coming from Ubá, while the most divergent ones are 29 and 97, from Visconde do Rio Branco. The grouping by the Tocher method separated the accessions into six groups, 94.1% of which were allocated in the first group and showed that there is no separation of accessions depending on the sampling sites. The 3D scatter plot reinforces this conclusion. There is genetic variability among the accessions of ‘Ubá’ mango tree evaluated. Therefore, it is possible to make mass selection in open-pollinated populations.
publishDate 2011
dc.date.issued.fl_str_mv 2011-06-05
dc.date.accessioned.fl_str_mv 2018-08-29T17:01:04Z
dc.date.available.fl_str_mv 2018-08-29T17:01:04Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s12033-011-9419-1
http://www.locus.ufv.br/handle/123456789/21518
dc.identifier.issn.none.fl_str_mv 1559-0305
identifier_str_mv 1559-0305
url http://dx.doi.org/10.1007/s12033-011-9419-1
http://www.locus.ufv.br/handle/123456789/21518
dc.language.iso.fl_str_mv eng
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dc.relation.ispartofseries.pt-BR.fl_str_mv Volume 50, Issue 2, p. 108–113, February 2012
dc.rights.driver.fl_str_mv Springer Science+Business Media, LLC 2011
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