Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil

Detalhes bibliográficos
Autor(a) principal: Castillo-Urquiza, Gloria P.
Data de Publicação: 2008
Outros Autores: Beserra Jr., José Evando A., Bruckner, Fernanda P., Lima, Alison T. M., Varsani, Arvind, Alfenas-Zerbini, Poliane, Zerbini, F. Murilo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://doi.org/10.1007/s00705-008-0172-0
http://www.locus.ufv.br/handle/123456789/19116
Resumo: The incidence of tomato-infecting begomoviruses has sharply increased in Brazil following the introduction of the B biotype of the whitefly vector in the early 1990s. Five definitive species and six tentative species have been described since then. Here, we report the detection of members of an additional six novel species, three in tomato and three infecting weeds that are commonly associated with tomato fields: Blainvillea rhomboidea, Sida rhombifolia and Sida micrantha. Tomato and weed samples were collected in two major tomato-growing regions of southeastern Brazil in 2005 and 2007. Two of the novel viruses were present in tomato plants collected in Paty do Alferes, Rio de Janeiro state. Three novel viruses were present in weed samples collected in Coimbra, Minas Gerais state. One virus was present in tomato samples collected at both locations. Genome features indicate that all six species are typical New World, bipartite begomoviruses. However, the viruses belonging to two of the novel species did not cluster with the Brazilian viruses in a phylogenetic tree. These species could represent a distinct lineage of New World begomoviruses, found in Brazil for the first time.
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spelling Castillo-Urquiza, Gloria P.Beserra Jr., José Evando A.Bruckner, Fernanda P.Lima, Alison T. M.Varsani, ArvindAlfenas-Zerbini, PolianeZerbini, F. Murilo2018-04-25T11:29:47Z2018-04-25T11:29:47Z2008-08-2414328798https://doi.org/10.1007/s00705-008-0172-0http://www.locus.ufv.br/handle/123456789/19116The incidence of tomato-infecting begomoviruses has sharply increased in Brazil following the introduction of the B biotype of the whitefly vector in the early 1990s. Five definitive species and six tentative species have been described since then. Here, we report the detection of members of an additional six novel species, three in tomato and three infecting weeds that are commonly associated with tomato fields: Blainvillea rhomboidea, Sida rhombifolia and Sida micrantha. Tomato and weed samples were collected in two major tomato-growing regions of southeastern Brazil in 2005 and 2007. Two of the novel viruses were present in tomato plants collected in Paty do Alferes, Rio de Janeiro state. Three novel viruses were present in weed samples collected in Coimbra, Minas Gerais state. One virus was present in tomato samples collected at both locations. Genome features indicate that all six species are typical New World, bipartite begomoviruses. However, the viruses belonging to two of the novel species did not cluster with the Brazilian viruses in a phylogenetic tree. These species could represent a distinct lineage of New World begomoviruses, found in Brazil for the first time.engArchives of Virologyv. 153, Issue 10, p. 1985–1989, October 2008Springer-Verlaginfo:eu-repo/semantics/openAccessCoi3Monophyletic clusterBegomovirus speciesBipartite begomovirusesTomato fieldSix novel begomoviruses infecting tomato and associated weeds in Southeastern Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdfTexto completoapplication/pdf179564https://locus.ufv.br//bitstream/123456789/19116/1/artigo.pdfc478c582a7e6b05b216f4dae25c22111MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/19116/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILartigo.pdf.jpgartigo.pdf.jpgIM Thumbnailimage/jpeg5140https://locus.ufv.br//bitstream/123456789/19116/3/artigo.pdf.jpg97ae88a352cea04a7ee2d79d7000fe24MD53123456789/191162018-04-25 23:00:41.524oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-04-26T02:00:41LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
title Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
spellingShingle Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
Castillo-Urquiza, Gloria P.
Coi3
Monophyletic cluster
Begomovirus species
Bipartite begomoviruses
Tomato field
title_short Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
title_full Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
title_fullStr Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
title_full_unstemmed Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
title_sort Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil
author Castillo-Urquiza, Gloria P.
author_facet Castillo-Urquiza, Gloria P.
Beserra Jr., José Evando A.
Bruckner, Fernanda P.
Lima, Alison T. M.
Varsani, Arvind
Alfenas-Zerbini, Poliane
Zerbini, F. Murilo
author_role author
author2 Beserra Jr., José Evando A.
Bruckner, Fernanda P.
Lima, Alison T. M.
Varsani, Arvind
Alfenas-Zerbini, Poliane
Zerbini, F. Murilo
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Castillo-Urquiza, Gloria P.
Beserra Jr., José Evando A.
Bruckner, Fernanda P.
Lima, Alison T. M.
Varsani, Arvind
Alfenas-Zerbini, Poliane
Zerbini, F. Murilo
dc.subject.pt-BR.fl_str_mv Coi3
Monophyletic cluster
Begomovirus species
Bipartite begomoviruses
Tomato field
topic Coi3
Monophyletic cluster
Begomovirus species
Bipartite begomoviruses
Tomato field
description The incidence of tomato-infecting begomoviruses has sharply increased in Brazil following the introduction of the B biotype of the whitefly vector in the early 1990s. Five definitive species and six tentative species have been described since then. Here, we report the detection of members of an additional six novel species, three in tomato and three infecting weeds that are commonly associated with tomato fields: Blainvillea rhomboidea, Sida rhombifolia and Sida micrantha. Tomato and weed samples were collected in two major tomato-growing regions of southeastern Brazil in 2005 and 2007. Two of the novel viruses were present in tomato plants collected in Paty do Alferes, Rio de Janeiro state. Three novel viruses were present in weed samples collected in Coimbra, Minas Gerais state. One virus was present in tomato samples collected at both locations. Genome features indicate that all six species are typical New World, bipartite begomoviruses. However, the viruses belonging to two of the novel species did not cluster with the Brazilian viruses in a phylogenetic tree. These species could represent a distinct lineage of New World begomoviruses, found in Brazil for the first time.
publishDate 2008
dc.date.issued.fl_str_mv 2008-08-24
dc.date.accessioned.fl_str_mv 2018-04-25T11:29:47Z
dc.date.available.fl_str_mv 2018-04-25T11:29:47Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv https://doi.org/10.1007/s00705-008-0172-0
http://www.locus.ufv.br/handle/123456789/19116
dc.identifier.issn.none.fl_str_mv 14328798
identifier_str_mv 14328798
url https://doi.org/10.1007/s00705-008-0172-0
http://www.locus.ufv.br/handle/123456789/19116
dc.language.iso.fl_str_mv eng
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dc.relation.ispartofseries.pt-BR.fl_str_mv v. 153, Issue 10, p. 1985–1989, October 2008
dc.rights.driver.fl_str_mv Springer-Verlag
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dc.publisher.none.fl_str_mv Archives of Virology
publisher.none.fl_str_mv Archives of Virology
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