Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis

Detalhes bibliográficos
Autor(a) principal: Valiate, Bruno Vinicius Santos
Data de Publicação: 2012
Tipo de documento: Dissertação
Idioma: por
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://locus.ufv.br/handle/123456789/2454
Resumo: Leishmaniasis are negligenciate diseases of sub-tropical countries. They are caused by protozoa that belong to Leishmania genus and are trasmitted by sand flies. Leishmaniasis mainly exists at cutaneous and visceral forms. At the Leishmania s surface there are proteins named ecto-triphosphate diphosphohydrolase (apyrases). Apyrases are enzymes that hydrolyze tri and di-phosfate nucleosides. Leishmania braziliensis has two mapped apyrase genes in its genome, NTPDase-1 and NTPDase-2. There are several papers that correlate the enzymatic activity with some processes like virulence, infection, nutrients capitation, and cellular adhesion. Non published data showed that there are single nucleotides polymorphisms (SNPs) in the messenger sequence of the NTPDase. SNPs might influence gene function by changing a codon base and its encoding amino acid. The present work proposed an analysis of SNPs from NTPDase-2 of ET strain of L.b. At the first part of the work, the genomic DNA was extracted to be used as a mold to the isolation of the NTPDase-2 gene by PCR. At the second part, clones of cultivated parasites were isolated through the limited dilution. After the isolation of five clones, the same procedure of the first part was made with the aim to sequence the NTPDase-2 gene of each isolate clone.A growth curve and measure of ecto-nucleotidase activity with the clones was made. The sequencing showed that in all the isolated colonies (in both at the first as at the second part) there are just 2 SNPs that do not change the codon. Two of five clones had a smaller growth. In the activity, the clones with the biggest growth had the biggest activity, it confirmed other results relating parasite`s proliferation and the ecto-nucleotidase activity. One of the clones, D12, had a high activity but did not grow so much. With this results, we can`t confirm the total relation but there are many mechanisms involving the cell growth and it may be involved with the difference between the activity and the clone D12 growth.
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spelling Valiate, Bruno Vinicius Santoshttp://lattes.cnpq.br/2065175824128436Silva, Eduardo de Almeida Marques dahttp://lattes.cnpq.br/9196320705613169Lamêgo, Márcia Rogéria de Almeidahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4782197P4Fietto, Juliana Lopes Rangelhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4790238D0Paula, Sérgio Oliveira dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4767540P4Bressan, Gustavo Costahttp://lattes.cnpq.br/11538532183477202015-03-26T13:07:35Z2013-05-292015-03-26T13:07:35Z2012-10-31VALIATE, Bruno Vinicius Santos. Polimorphisms study of on NTPDase-2 gene of ET strain from Leishmania (Viannia) braziliensis. 2012. 65 f. Dissertação (Mestrado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2012.http://locus.ufv.br/handle/123456789/2454Leishmaniasis are negligenciate diseases of sub-tropical countries. They are caused by protozoa that belong to Leishmania genus and are trasmitted by sand flies. Leishmaniasis mainly exists at cutaneous and visceral forms. At the Leishmania s surface there are proteins named ecto-triphosphate diphosphohydrolase (apyrases). Apyrases are enzymes that hydrolyze tri and di-phosfate nucleosides. Leishmania braziliensis has two mapped apyrase genes in its genome, NTPDase-1 and NTPDase-2. There are several papers that correlate the enzymatic activity with some processes like virulence, infection, nutrients capitation, and cellular adhesion. Non published data showed that there are single nucleotides polymorphisms (SNPs) in the messenger sequence of the NTPDase. SNPs might influence gene function by changing a codon base and its encoding amino acid. The present work proposed an analysis of SNPs from NTPDase-2 of ET strain of L.b. At the first part of the work, the genomic DNA was extracted to be used as a mold to the isolation of the NTPDase-2 gene by PCR. At the second part, clones of cultivated parasites were isolated through the limited dilution. After the isolation of five clones, the same procedure of the first part was made with the aim to sequence the NTPDase-2 gene of each isolate clone.A growth curve and measure of ecto-nucleotidase activity with the clones was made. The sequencing showed that in all the isolated colonies (in both at the first as at the second part) there are just 2 SNPs that do not change the codon. Two of five clones had a smaller growth. In the activity, the clones with the biggest growth had the biggest activity, it confirmed other results relating parasite`s proliferation and the ecto-nucleotidase activity. One of the clones, D12, had a high activity but did not grow so much. With this results, we can`t confirm the total relation but there are many mechanisms involving the cell growth and it may be involved with the difference between the activity and the clone D12 growth.As Leishmanioses são doenças negligenciadas de países subtropicais. Causada por protozoário do gênero Leishmania, que são transmitidos por flebotomíneos. As Leishmanioses consistem basicamente de duas formas, cutânea e visceral. Na superfície dos parasitos deste gênero há proteínas denominadas ecto-nucleotidades (apirases). Apirases são enzimas que hidrolisam nucleosídeos tri e di-fosfatados. Em Leishmania braziliensis há dois genes de apirase mapeados, NTPDase-1 e 2. Há diversos trabalhos que relacionam a atividade destas enzimas com processos como virulência, infecção, captação de nutrientes e adesão celular. Dados não publicados de RNA seq revelaram que na sequência mensageira das NTPDases existem polimorfismos de base única (SNPs). SNPs podem influenciar a função de um gene através de mudança de uma base de um códon, podendo gerar uma mudança de aminoácido. Este trabalho objetivou a análise dos SNPs da NTPDase-2 da cepa ET de L. b. Na primeira parte do trabalho o DNA genômico foi extraído para que pudesse ser usado como molde para isolamento do gene da NTPDase-2 por PCR. O gene isolado foi ligado no vetor pJET para posterior sequenciamento. Na segunda parte, foram isolados clones dos parasitos cultivados através de diluição limitante. Após o isolamento de 5 clones, foram feitos os mesmos procedimentos da primeira parte para que a NTPDase-2 de cada clone pudesse ser sequenciada. Com os clones foi feita uma curva de crescimento e medida da atividade ecto-nucleotidásica. O sequenciamento mostrou que há 2 SNPs que não mudam o códon em todas as colônias isoladas pra sequenciamento, tanto na primeira quanto na segunda parte. Dos 5 clones, dois tiveram um crescimento menor que os demais. Na comparação das atividades nucleotidásicas foi observado que os clones que mais cresceram tiveram maior atividade, confirmando resultados de outros trabalhos que relacionam proliferação dos parasitos com atividade ecto-nucleotidásica. Entretando um dos clones apresentou alta atividade sem que tenha se observado alta proliferação. Os resultados confirmaram parcialmente esta relação e estudos posteriores visam completar e melhor explicar os resultados observados.Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade Federal de ViçosaMestrado em Bioquímica AgrícolaUFVBRBioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animalPolimorfismoNTPDase 2LeishmaniaPolymorphismsNTPDase 2LeishmaniaCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAREstudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensisPolimorphisms study of on NTPDase-2 gene of ET strain from Leishmania (Viannia) braziliensisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf2427612https://locus.ufv.br//bitstream/123456789/2454/1/texto%20completo.pdfe1461ed26d7cfe26b826a1151312d606MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain134505https://locus.ufv.br//bitstream/123456789/2454/2/texto%20completo.pdf.txta70c4dfbd6a20a4feeaec1db3335e40aMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3637https://locus.ufv.br//bitstream/123456789/2454/3/texto%20completo.pdf.jpg39308d9e948f2c01a2288215ce1ae240MD53123456789/24542016-04-08 23:04:25.1oai:locus.ufv.br:123456789/2454Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-09T02:04:25LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
dc.title.alternative.eng.fl_str_mv Polimorphisms study of on NTPDase-2 gene of ET strain from Leishmania (Viannia) braziliensis
title Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
spellingShingle Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
Valiate, Bruno Vinicius Santos
Polimorfismo
NTPDase 2
Leishmania
Polymorphisms
NTPDase 2
Leishmania
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
title_short Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
title_full Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
title_fullStr Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
title_full_unstemmed Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
title_sort Estudo dos polimorfismos no gene da NTPDase 2 da cepa ET de Leishmania (Viannia) braziliensis
author Valiate, Bruno Vinicius Santos
author_facet Valiate, Bruno Vinicius Santos
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://lattes.cnpq.br/2065175824128436
dc.contributor.author.fl_str_mv Valiate, Bruno Vinicius Santos
dc.contributor.advisor-co1.fl_str_mv Silva, Eduardo de Almeida Marques da
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/9196320705613169
dc.contributor.advisor-co2.fl_str_mv Lamêgo, Márcia Rogéria de Almeida
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4782197P4
dc.contributor.advisor1.fl_str_mv Fietto, Juliana Lopes Rangel
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4790238D0
dc.contributor.referee1.fl_str_mv Paula, Sérgio Oliveira de
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4767540P4
dc.contributor.referee2.fl_str_mv Bressan, Gustavo Costa
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/1153853218347720
contributor_str_mv Silva, Eduardo de Almeida Marques da
Lamêgo, Márcia Rogéria de Almeida
Fietto, Juliana Lopes Rangel
Paula, Sérgio Oliveira de
Bressan, Gustavo Costa
dc.subject.por.fl_str_mv Polimorfismo
NTPDase 2
Leishmania
topic Polimorfismo
NTPDase 2
Leishmania
Polymorphisms
NTPDase 2
Leishmania
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
dc.subject.eng.fl_str_mv Polymorphisms
NTPDase 2
Leishmania
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
description Leishmaniasis are negligenciate diseases of sub-tropical countries. They are caused by protozoa that belong to Leishmania genus and are trasmitted by sand flies. Leishmaniasis mainly exists at cutaneous and visceral forms. At the Leishmania s surface there are proteins named ecto-triphosphate diphosphohydrolase (apyrases). Apyrases are enzymes that hydrolyze tri and di-phosfate nucleosides. Leishmania braziliensis has two mapped apyrase genes in its genome, NTPDase-1 and NTPDase-2. There are several papers that correlate the enzymatic activity with some processes like virulence, infection, nutrients capitation, and cellular adhesion. Non published data showed that there are single nucleotides polymorphisms (SNPs) in the messenger sequence of the NTPDase. SNPs might influence gene function by changing a codon base and its encoding amino acid. The present work proposed an analysis of SNPs from NTPDase-2 of ET strain of L.b. At the first part of the work, the genomic DNA was extracted to be used as a mold to the isolation of the NTPDase-2 gene by PCR. At the second part, clones of cultivated parasites were isolated through the limited dilution. After the isolation of five clones, the same procedure of the first part was made with the aim to sequence the NTPDase-2 gene of each isolate clone.A growth curve and measure of ecto-nucleotidase activity with the clones was made. The sequencing showed that in all the isolated colonies (in both at the first as at the second part) there are just 2 SNPs that do not change the codon. Two of five clones had a smaller growth. In the activity, the clones with the biggest growth had the biggest activity, it confirmed other results relating parasite`s proliferation and the ecto-nucleotidase activity. One of the clones, D12, had a high activity but did not grow so much. With this results, we can`t confirm the total relation but there are many mechanisms involving the cell growth and it may be involved with the difference between the activity and the clone D12 growth.
publishDate 2012
dc.date.issued.fl_str_mv 2012-10-31
dc.date.available.fl_str_mv 2013-05-29
2015-03-26T13:07:35Z
dc.date.accessioned.fl_str_mv 2015-03-26T13:07:35Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv VALIATE, Bruno Vinicius Santos. Polimorphisms study of on NTPDase-2 gene of ET strain from Leishmania (Viannia) braziliensis. 2012. 65 f. Dissertação (Mestrado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2012.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/2454
identifier_str_mv VALIATE, Bruno Vinicius Santos. Polimorphisms study of on NTPDase-2 gene of ET strain from Leishmania (Viannia) braziliensis. 2012. 65 f. Dissertação (Mestrado em Bioquímica e Biologia molecular de plantas; Bioquímica e Biologia molecular animal) - Universidade Federal de Viçosa, Viçosa, 2012.
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