Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | LOCUS Repositório Institucional da UFV |
Texto Completo: | http://dx.doi.org/10.1590/1984-70332017v17n4a46 https://locus.ufv.br//handle/123456789/27114 |
Resumo: | One of the major challenges in sugarcane breeding programs is an efficient selection of genotypes in the initial phase. The purpose of this study was to compare modelling by artificial neural networks (ANN) and linear discriminant analysis (LDA) as alternatives for the selection of promising sugarcane families based on the indirect traits number of sugarcane stalks (NS), stalk diameter (SD) and stalk height (SH). The analysis focused on two models, a full one with all predictors, and a reduced one, from which the variable SH was excluded. To compare and assess the applied methods, the apparent error rate (AER) and true positive rate (TPR) were used, derived from the confusion matrix. Modeling with ANN and LDA can be used successfully for selection among sugarcane families. The reduced model may be preferable, for having a low AER, high TPR and being easier to obtain in operational terms. |
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Peternelli, Luiz AlexandreMoreira, Édimo Fernando AlvesNascimento, MoysésCruz, Cosme Damião2019-09-24T12:31:58Z2019-09-24T12:31:58Z2017-101984-7033http://dx.doi.org/10.1590/1984-70332017v17n4a46https://locus.ufv.br//handle/123456789/27114One of the major challenges in sugarcane breeding programs is an efficient selection of genotypes in the initial phase. The purpose of this study was to compare modelling by artificial neural networks (ANN) and linear discriminant analysis (LDA) as alternatives for the selection of promising sugarcane families based on the indirect traits number of sugarcane stalks (NS), stalk diameter (SD) and stalk height (SH). The analysis focused on two models, a full one with all predictors, and a reduced one, from which the variable SH was excluded. To compare and assess the applied methods, the apparent error rate (AER) and true positive rate (TPR) were used, derived from the confusion matrix. Modeling with ANN and LDA can be used successfully for selection among sugarcane families. The reduced model may be preferable, for having a low AER, high TPR and being easier to obtain in operational terms.engCrop Breeding and Applied Biotechnologyv. 17 n. 04, p. 299- 305, out./ dez. 2017Plant breedingArtificial intelligenceStatistical learningArtificial neural networks and linear discriminant analysis in early selection among sugarcane familiesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdfTexto completoapplication/pdf780251https://locus.ufv.br//bitstream/123456789/27114/1/artigo.pdf548aea8b9511e9448bf08d48096a0b4aMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/27114/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/271142019-09-24 11:19:07.5oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452019-09-24T14:19:07LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false |
dc.title.en.fl_str_mv |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
title |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
spellingShingle |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families Peternelli, Luiz Alexandre Plant breeding Artificial intelligence Statistical learning |
title_short |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
title_full |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
title_fullStr |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
title_full_unstemmed |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
title_sort |
Artificial neural networks and linear discriminant analysis in early selection among sugarcane families |
author |
Peternelli, Luiz Alexandre |
author_facet |
Peternelli, Luiz Alexandre Moreira, Édimo Fernando Alves Nascimento, Moysés Cruz, Cosme Damião |
author_role |
author |
author2 |
Moreira, Édimo Fernando Alves Nascimento, Moysés Cruz, Cosme Damião |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Peternelli, Luiz Alexandre Moreira, Édimo Fernando Alves Nascimento, Moysés Cruz, Cosme Damião |
dc.subject.pt-BR.fl_str_mv |
Plant breeding Artificial intelligence Statistical learning |
topic |
Plant breeding Artificial intelligence Statistical learning |
description |
One of the major challenges in sugarcane breeding programs is an efficient selection of genotypes in the initial phase. The purpose of this study was to compare modelling by artificial neural networks (ANN) and linear discriminant analysis (LDA) as alternatives for the selection of promising sugarcane families based on the indirect traits number of sugarcane stalks (NS), stalk diameter (SD) and stalk height (SH). The analysis focused on two models, a full one with all predictors, and a reduced one, from which the variable SH was excluded. To compare and assess the applied methods, the apparent error rate (AER) and true positive rate (TPR) were used, derived from the confusion matrix. Modeling with ANN and LDA can be used successfully for selection among sugarcane families. The reduced model may be preferable, for having a low AER, high TPR and being easier to obtain in operational terms. |
publishDate |
2017 |
dc.date.issued.fl_str_mv |
2017-10 |
dc.date.accessioned.fl_str_mv |
2019-09-24T12:31:58Z |
dc.date.available.fl_str_mv |
2019-09-24T12:31:58Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1984-70332017v17n4a46 https://locus.ufv.br//handle/123456789/27114 |
dc.identifier.issn.none.fl_str_mv |
1984-7033 |
identifier_str_mv |
1984-7033 |
url |
http://dx.doi.org/10.1590/1984-70332017v17n4a46 https://locus.ufv.br//handle/123456789/27114 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofseries.pt-BR.fl_str_mv |
v. 17 n. 04, p. 299- 305, out./ dez. 2017 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
dc.source.none.fl_str_mv |
reponame:LOCUS Repositório Institucional da UFV instname:Universidade Federal de Viçosa (UFV) instacron:UFV |
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Universidade Federal de Viçosa (UFV) |
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UFV |
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LOCUS Repositório Institucional da UFV |
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LOCUS Repositório Institucional da UFV |
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