Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

Detalhes bibliográficos
Autor(a) principal: Kohler, Annegret
Data de Publicação: 2015
Outros Autores: Kuo, Alan, Nagy, Laszlo G, Morin, Emmanuelle, Barry, Kerrie W, Buscot, Francois, Canbäck, Björn, Choi, Cindy, Cichocki, Nicolas, Clum, Alicia, Colpaert, Jan, Copeland, Alex, Costa, Mauricio D, Doré, Jeanne, Floudas, Dimitrios, Gay, Gilles, Girlanda, Mariangela, et al.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://doi.org/10.1038/ng.3223
http://www.locus.ufv.br/handle/123456789/19869
Resumo: To elucidate the genetic bases of mycorrhizal lifestyle evolution, we sequenced new fungal genomes, including 13 ectomycorrhizal (ECM), orchid (ORM) and ericoid (ERM) species, and five saprotrophs, which we analyzed along with other fungal genomes. Ectomycorrhizal fungi have a reduced complement of genes encoding plant cell wall–degrading enzymes (PCWDEs), as compared to their ancestral wood decayers. Nevertheless, they have retained a unique array of PCWDEs, thus suggesting that they possess diverse abilities to decompose lignocellulose. Similar functional categories of nonorthologous genes are induced in symbiosis. Of induced genes, 7–38% are orphan genes, including genes that encode secreted effector-like proteins. Convergent evolution of the mycorrhizal habit in fungi occurred via the repeated evolution of a 'symbiosis toolkit', with reduced numbers of PCWDEs and lineage-specific suites of mycorrhiza-induced genes.
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spelling Kohler, AnnegretKuo, AlanNagy, Laszlo GMorin, EmmanuelleBarry, Kerrie WBuscot, FrancoisCanbäck, BjörnChoi, CindyCichocki, NicolasClum, AliciaColpaert, JanCopeland, AlexCosta, Mauricio DDoré, JeanneFloudas, DimitriosGay, GillesGirlanda, Mariangelaet al.,2018-05-29T16:56:31Z2018-05-29T16:56:31Z2015-01-281546-1718http://doi.org/10.1038/ng.3223http://www.locus.ufv.br/handle/123456789/19869To elucidate the genetic bases of mycorrhizal lifestyle evolution, we sequenced new fungal genomes, including 13 ectomycorrhizal (ECM), orchid (ORM) and ericoid (ERM) species, and five saprotrophs, which we analyzed along with other fungal genomes. Ectomycorrhizal fungi have a reduced complement of genes encoding plant cell wall–degrading enzymes (PCWDEs), as compared to their ancestral wood decayers. Nevertheless, they have retained a unique array of PCWDEs, thus suggesting that they possess diverse abilities to decompose lignocellulose. Similar functional categories of nonorthologous genes are induced in symbiosis. Of induced genes, 7–38% are orphan genes, including genes that encode secreted effector-like proteins. Convergent evolution of the mycorrhizal habit in fungi occurred via the repeated evolution of a 'symbiosis toolkit', with reduced numbers of PCWDEs and lineage-specific suites of mycorrhiza-induced genes.engNature GeneticsVolume 47, Pages 410–415, March 2015Convergent lossesDecay mechanismsRapid turnover of symbiosis genesMycorrhizal mutualistsConvergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualistsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdftexto completoapplication/pdf1025928https://locus.ufv.br//bitstream/123456789/19869/1/artigo.pdf68db04c74d96fd283358797a4bf4cac8MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/19869/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILartigo.pdf.jpgartigo.pdf.jpgIM Thumbnailimage/jpeg4665https://locus.ufv.br//bitstream/123456789/19869/3/artigo.pdf.jpgf63ea4a59c50950f2f02e98c62bd708dMD53123456789/198692018-05-29 23:00:43.143oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-05-30T02:00:43LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
title Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
spellingShingle Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
Kohler, Annegret
Convergent losses
Decay mechanisms
Rapid turnover of symbiosis genes
Mycorrhizal mutualists
title_short Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
title_full Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
title_fullStr Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
title_full_unstemmed Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
title_sort Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
author Kohler, Annegret
author_facet Kohler, Annegret
Kuo, Alan
Nagy, Laszlo G
Morin, Emmanuelle
Barry, Kerrie W
Buscot, Francois
Canbäck, Björn
Choi, Cindy
Cichocki, Nicolas
Clum, Alicia
Colpaert, Jan
Copeland, Alex
Costa, Mauricio D
Doré, Jeanne
Floudas, Dimitrios
Gay, Gilles
Girlanda, Mariangela
et al.,
author_role author
author2 Kuo, Alan
Nagy, Laszlo G
Morin, Emmanuelle
Barry, Kerrie W
Buscot, Francois
Canbäck, Björn
Choi, Cindy
Cichocki, Nicolas
Clum, Alicia
Colpaert, Jan
Copeland, Alex
Costa, Mauricio D
Doré, Jeanne
Floudas, Dimitrios
Gay, Gilles
Girlanda, Mariangela
et al.,
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Kohler, Annegret
Kuo, Alan
Nagy, Laszlo G
Morin, Emmanuelle
Barry, Kerrie W
Buscot, Francois
Canbäck, Björn
Choi, Cindy
Cichocki, Nicolas
Clum, Alicia
Colpaert, Jan
Copeland, Alex
Costa, Mauricio D
Doré, Jeanne
Floudas, Dimitrios
Gay, Gilles
Girlanda, Mariangela
et al.,
dc.subject.pt-BR.fl_str_mv Convergent losses
Decay mechanisms
Rapid turnover of symbiosis genes
Mycorrhizal mutualists
topic Convergent losses
Decay mechanisms
Rapid turnover of symbiosis genes
Mycorrhizal mutualists
description To elucidate the genetic bases of mycorrhizal lifestyle evolution, we sequenced new fungal genomes, including 13 ectomycorrhizal (ECM), orchid (ORM) and ericoid (ERM) species, and five saprotrophs, which we analyzed along with other fungal genomes. Ectomycorrhizal fungi have a reduced complement of genes encoding plant cell wall–degrading enzymes (PCWDEs), as compared to their ancestral wood decayers. Nevertheless, they have retained a unique array of PCWDEs, thus suggesting that they possess diverse abilities to decompose lignocellulose. Similar functional categories of nonorthologous genes are induced in symbiosis. Of induced genes, 7–38% are orphan genes, including genes that encode secreted effector-like proteins. Convergent evolution of the mycorrhizal habit in fungi occurred via the repeated evolution of a 'symbiosis toolkit', with reduced numbers of PCWDEs and lineage-specific suites of mycorrhiza-induced genes.
publishDate 2015
dc.date.issued.fl_str_mv 2015-01-28
dc.date.accessioned.fl_str_mv 2018-05-29T16:56:31Z
dc.date.available.fl_str_mv 2018-05-29T16:56:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://doi.org/10.1038/ng.3223
http://www.locus.ufv.br/handle/123456789/19869
dc.identifier.issn.none.fl_str_mv 1546-1718
identifier_str_mv 1546-1718
url http://doi.org/10.1038/ng.3223
http://www.locus.ufv.br/handle/123456789/19869
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv Volume 47, Pages 410–415, March 2015
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Nature Genetics
publisher.none.fl_str_mv Nature Genetics
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