Sequence characterized amplified regions linked to rust resistance genes in the common bean

Detalhes bibliográficos
Autor(a) principal: Corrêa, Ronan Xavier
Data de Publicação: 2000
Outros Autores: Costa, M. R., Good- God, P. I., Ragagnin, V. A., Faleiro, F. G., Moreira, M. A., Barros, E. G. de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://dx.doi.org/10.2135/cropsci2000.403804x
http://www.locus.ufv.br/handle/123456789/23704
Resumo: Uromyces appendiculatus (Pers.) Unger, the causative fungus of rust in common beans (Phaseolus vulgaris L.), consists of many pathotypes or pathogenic races. Cultivar Ouro Negro is resistant to most pathotypes detected in Brazil in the last few decades. We attempted to identify molecular markers linked to a rust resistance gene block present in Ouro Negro. DNA samples extracted from homozygous near isogenic BC3F2:3 lines derived from a cross between susceptible cultivar US Pinto 111 and Ouro Negro were grouped, following greenhouse inoculations, into two contrasting bulks, one containing only resistant and the other only susceptible plants. The bulks were amplified with 605 random primers and two of them amplified bands which were heteromorphic between the two bulks. These random amplified polymorphic DNA (RAPD) bands were transformed into sequence characterized amplified regions (SCARs) SCARBA08 and SCARF10. The rust resistance–susceptibility phenotypes and the molecular genotypes with the two SCAR markers of 303 F2:3 families from US Pinto 111 × Ouro Negro were determined. SCARBA08 and SCARF10 were determined to be 4.3 ± 1.2 and 6.0 ± 1.3 centimorgans (cM) from the rust resistance locus, respectively. These markers are being used in combination with other markers for resistance to rust, anthracnose, and angular leaf spot previously identified in our laboratory to aid the indirect selection of desirable plants in segregating populations in which Ouro Negro has been used as donor parent.
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spelling Corrêa, Ronan XavierCosta, M. R.Good- God, P. I.Ragagnin, V. A.Faleiro, F. G.Moreira, M. A.Barros, E. G. de2019-02-26T13:34:05Z2019-02-26T13:34:05Z2000-051435-0653http://dx.doi.org/10.2135/cropsci2000.403804xhttp://www.locus.ufv.br/handle/123456789/23704Uromyces appendiculatus (Pers.) Unger, the causative fungus of rust in common beans (Phaseolus vulgaris L.), consists of many pathotypes or pathogenic races. Cultivar Ouro Negro is resistant to most pathotypes detected in Brazil in the last few decades. We attempted to identify molecular markers linked to a rust resistance gene block present in Ouro Negro. DNA samples extracted from homozygous near isogenic BC3F2:3 lines derived from a cross between susceptible cultivar US Pinto 111 and Ouro Negro were grouped, following greenhouse inoculations, into two contrasting bulks, one containing only resistant and the other only susceptible plants. The bulks were amplified with 605 random primers and two of them amplified bands which were heteromorphic between the two bulks. These random amplified polymorphic DNA (RAPD) bands were transformed into sequence characterized amplified regions (SCARs) SCARBA08 and SCARF10. The rust resistance–susceptibility phenotypes and the molecular genotypes with the two SCAR markers of 303 F2:3 families from US Pinto 111 × Ouro Negro were determined. SCARBA08 and SCARF10 were determined to be 4.3 ± 1.2 and 6.0 ± 1.3 centimorgans (cM) from the rust resistance locus, respectively. These markers are being used in combination with other markers for resistance to rust, anthracnose, and angular leaf spot previously identified in our laboratory to aid the indirect selection of desirable plants in segregating populations in which Ouro Negro has been used as donor parent.engCrop ScienceV. 40, N. 3, P. 804- 807, May.– Jun. 2000Crop Science Society of Americainfo:eu-repo/semantics/openAccessASAPAllele- specific associated primers bpcMCentimorgan NILSequence characterized amplified regionNear isogenic lineRAPDRandom amplified polymorphic DNASCARSequence characterized amplified regions linked to rust resistance genes in the common beaninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdftexto completoapplication/pdf108420https://locus.ufv.br//bitstream/123456789/23704/1/artigo.pdf9b9bad1496e213c58cbcf7f6c389eff8MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/23704/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/237042019-02-26 10:36:28.571oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452019-02-26T13:36:28LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Sequence characterized amplified regions linked to rust resistance genes in the common bean
title Sequence characterized amplified regions linked to rust resistance genes in the common bean
spellingShingle Sequence characterized amplified regions linked to rust resistance genes in the common bean
Corrêa, Ronan Xavier
ASAP
Allele- specific associated primers bp
cM
Centimorgan NIL
Sequence characterized amplified region
Near isogenic line
RAPD
Random amplified polymorphic DNA
SCAR
title_short Sequence characterized amplified regions linked to rust resistance genes in the common bean
title_full Sequence characterized amplified regions linked to rust resistance genes in the common bean
title_fullStr Sequence characterized amplified regions linked to rust resistance genes in the common bean
title_full_unstemmed Sequence characterized amplified regions linked to rust resistance genes in the common bean
title_sort Sequence characterized amplified regions linked to rust resistance genes in the common bean
author Corrêa, Ronan Xavier
author_facet Corrêa, Ronan Xavier
Costa, M. R.
Good- God, P. I.
Ragagnin, V. A.
Faleiro, F. G.
Moreira, M. A.
Barros, E. G. de
author_role author
author2 Costa, M. R.
Good- God, P. I.
Ragagnin, V. A.
Faleiro, F. G.
Moreira, M. A.
Barros, E. G. de
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Corrêa, Ronan Xavier
Costa, M. R.
Good- God, P. I.
Ragagnin, V. A.
Faleiro, F. G.
Moreira, M. A.
Barros, E. G. de
dc.subject.pt-BR.fl_str_mv ASAP
Allele- specific associated primers bp
cM
Centimorgan NIL
Sequence characterized amplified region
Near isogenic line
RAPD
Random amplified polymorphic DNA
SCAR
topic ASAP
Allele- specific associated primers bp
cM
Centimorgan NIL
Sequence characterized amplified region
Near isogenic line
RAPD
Random amplified polymorphic DNA
SCAR
description Uromyces appendiculatus (Pers.) Unger, the causative fungus of rust in common beans (Phaseolus vulgaris L.), consists of many pathotypes or pathogenic races. Cultivar Ouro Negro is resistant to most pathotypes detected in Brazil in the last few decades. We attempted to identify molecular markers linked to a rust resistance gene block present in Ouro Negro. DNA samples extracted from homozygous near isogenic BC3F2:3 lines derived from a cross between susceptible cultivar US Pinto 111 and Ouro Negro were grouped, following greenhouse inoculations, into two contrasting bulks, one containing only resistant and the other only susceptible plants. The bulks were amplified with 605 random primers and two of them amplified bands which were heteromorphic between the two bulks. These random amplified polymorphic DNA (RAPD) bands were transformed into sequence characterized amplified regions (SCARs) SCARBA08 and SCARF10. The rust resistance–susceptibility phenotypes and the molecular genotypes with the two SCAR markers of 303 F2:3 families from US Pinto 111 × Ouro Negro were determined. SCARBA08 and SCARF10 were determined to be 4.3 ± 1.2 and 6.0 ± 1.3 centimorgans (cM) from the rust resistance locus, respectively. These markers are being used in combination with other markers for resistance to rust, anthracnose, and angular leaf spot previously identified in our laboratory to aid the indirect selection of desirable plants in segregating populations in which Ouro Negro has been used as donor parent.
publishDate 2000
dc.date.issued.fl_str_mv 2000-05
dc.date.accessioned.fl_str_mv 2019-02-26T13:34:05Z
dc.date.available.fl_str_mv 2019-02-26T13:34:05Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://dx.doi.org/10.2135/cropsci2000.403804x
http://www.locus.ufv.br/handle/123456789/23704
dc.identifier.issn.none.fl_str_mv 1435-0653
identifier_str_mv 1435-0653
url http://dx.doi.org/10.2135/cropsci2000.403804x
http://www.locus.ufv.br/handle/123456789/23704
dc.language.iso.fl_str_mv eng
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dc.relation.ispartofseries.pt-BR.fl_str_mv V. 40, N. 3, P. 804- 807, May.– Jun. 2000
dc.rights.driver.fl_str_mv Crop Science Society of America
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