Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species

Detalhes bibliográficos
Autor(a) principal: Graça, Grazielle Cardoso da
Data de Publicação: 2012
Outros Autores: Volpini, Angela Cristina, Romero, Gustavo Adolfo Sierra, Oliveira Neto, Manoel Paes de, Hueb, Marcia, Porrozzi, Renato, Boité, Mariana Côrtes, Cupolillo, Elisa
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UnB
Texto Completo: http://repositorio.unb.br/handle/10482/28305
https://dx.doi.org/10.1590/S0074-02762012000500014
Resumo: In this study, PCR assays targeting different Leishmania heat-shock protein 70 gene (hsp70) regions, producing fragments ranging in size from 230-390 bp were developed and evaluated to determine their potential as a tool for the specific molecular diagnosis of cutaneous leishmaniasis (CL). A total of 70 Leishmania strains were analysed, including seven reference strains (RS) and 63 previously typed strains. Analysis of the RS indicated a specific region of 234 bp in the hsp70 gene as a valid target that was highly sensitive for detection of Leishmania species DNA with capacity of distinguishing all analyzed species, after polymerase chain reaction-restriction fragment length polymorfism (PCR-RFLP). This PCR assay was compared with other PCR targets used for the molecular diagnosis of leishmaniasis: hsp70 (1400-bp region), internal transcribed spacer (ITS)1 and glucose-6-phosphate dehydrogenase (G6pd). A good agreement among the methods was observed concerning the Leishmania species identification. Moreover, to evaluate the potential for molecular diagnosis, we compared the PCR targets hsp70-234 bp, ITS1, G6pd and mkDNA using a panel of 99 DNA samples from tissue fragments collected from patients with confirmed CL. Both PCR-hsp70-234 bp and PCR-ITS1 detected Leishmania DNA in more than 70% of the samples. However, using hsp70-234 bp PCR-RFLP, identification of all of the Leishmania species associated with CL in Brazil can be achieved employing a simpler and cheaper electrophoresis protocol.
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spelling Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite speciesLeishmanioseDiagnóstico molecularIdentificação de espéciesReação em cadeia de polimeraseIn this study, PCR assays targeting different Leishmania heat-shock protein 70 gene (hsp70) regions, producing fragments ranging in size from 230-390 bp were developed and evaluated to determine their potential as a tool for the specific molecular diagnosis of cutaneous leishmaniasis (CL). A total of 70 Leishmania strains were analysed, including seven reference strains (RS) and 63 previously typed strains. Analysis of the RS indicated a specific region of 234 bp in the hsp70 gene as a valid target that was highly sensitive for detection of Leishmania species DNA with capacity of distinguishing all analyzed species, after polymerase chain reaction-restriction fragment length polymorfism (PCR-RFLP). This PCR assay was compared with other PCR targets used for the molecular diagnosis of leishmaniasis: hsp70 (1400-bp region), internal transcribed spacer (ITS)1 and glucose-6-phosphate dehydrogenase (G6pd). A good agreement among the methods was observed concerning the Leishmania species identification. Moreover, to evaluate the potential for molecular diagnosis, we compared the PCR targets hsp70-234 bp, ITS1, G6pd and mkDNA using a panel of 99 DNA samples from tissue fragments collected from patients with confirmed CL. Both PCR-hsp70-234 bp and PCR-ITS1 detected Leishmania DNA in more than 70% of the samples. However, using hsp70-234 bp PCR-RFLP, identification of all of the Leishmania species associated with CL in Brazil can be achieved employing a simpler and cheaper electrophoresis protocol.Faculdade de Medicina (FMD)Instituto Oswaldo Cruz, Ministério da Saúde2017-12-07T04:58:14Z2017-12-07T04:58:14Z2012-08info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfGRACA, Grazielle Cardoso da et al. Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species. Memórias do Instituto Oswaldo Cruz, Rio de Janeiro, v. 107, n. 5, p. 664-674, ago. 2012. DOI: https://doi.org/10.1590/S0074-02762012000500014. Disponível em: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762012000500014&lng=en&nrm=iso. Acesso em: 04 dez. 2020.http://repositorio.unb.br/handle/10482/28305https://dx.doi.org/10.1590/S0074-02762012000500014Memórias do Instituto Oswaldo Cruz - All the contents of this journal, except where otherwise noted, is licensed under a Creative Commons Attribution License (CC BY NC 4.0). Fonte: https://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762012000500014&lng=en&tlng=en. Acesso em: 04 dez. 2020.info:eu-repo/semantics/openAccessGraça, Grazielle Cardoso daVolpini, Angela CristinaRomero, Gustavo Adolfo SierraOliveira Neto, Manoel Paes deHueb, MarciaPorrozzi, RenatoBoité, Mariana CôrtesCupolillo, Elisaengreponame:Repositório Institucional da UnBinstname:Universidade de Brasília (UnB)instacron:UNB2024-05-24T10:39:53Zoai:repositorio.unb.br:10482/28305Repositório InstitucionalPUBhttps://repositorio.unb.br/oai/requestrepositorio@unb.bropendoar:2024-05-24T10:39:53Repositório Institucional da UnB - Universidade de Brasília (UnB)false
dc.title.none.fl_str_mv Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
title Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
spellingShingle Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
Graça, Grazielle Cardoso da
Leishmaniose
Diagnóstico molecular
Identificação de espécies
Reação em cadeia de polimerase
title_short Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
title_full Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
title_fullStr Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
title_full_unstemmed Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
title_sort Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species
author Graça, Grazielle Cardoso da
author_facet Graça, Grazielle Cardoso da
Volpini, Angela Cristina
Romero, Gustavo Adolfo Sierra
Oliveira Neto, Manoel Paes de
Hueb, Marcia
Porrozzi, Renato
Boité, Mariana Côrtes
Cupolillo, Elisa
author_role author
author2 Volpini, Angela Cristina
Romero, Gustavo Adolfo Sierra
Oliveira Neto, Manoel Paes de
Hueb, Marcia
Porrozzi, Renato
Boité, Mariana Côrtes
Cupolillo, Elisa
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Graça, Grazielle Cardoso da
Volpini, Angela Cristina
Romero, Gustavo Adolfo Sierra
Oliveira Neto, Manoel Paes de
Hueb, Marcia
Porrozzi, Renato
Boité, Mariana Côrtes
Cupolillo, Elisa
dc.subject.por.fl_str_mv Leishmaniose
Diagnóstico molecular
Identificação de espécies
Reação em cadeia de polimerase
topic Leishmaniose
Diagnóstico molecular
Identificação de espécies
Reação em cadeia de polimerase
description In this study, PCR assays targeting different Leishmania heat-shock protein 70 gene (hsp70) regions, producing fragments ranging in size from 230-390 bp were developed and evaluated to determine their potential as a tool for the specific molecular diagnosis of cutaneous leishmaniasis (CL). A total of 70 Leishmania strains were analysed, including seven reference strains (RS) and 63 previously typed strains. Analysis of the RS indicated a specific region of 234 bp in the hsp70 gene as a valid target that was highly sensitive for detection of Leishmania species DNA with capacity of distinguishing all analyzed species, after polymerase chain reaction-restriction fragment length polymorfism (PCR-RFLP). This PCR assay was compared with other PCR targets used for the molecular diagnosis of leishmaniasis: hsp70 (1400-bp region), internal transcribed spacer (ITS)1 and glucose-6-phosphate dehydrogenase (G6pd). A good agreement among the methods was observed concerning the Leishmania species identification. Moreover, to evaluate the potential for molecular diagnosis, we compared the PCR targets hsp70-234 bp, ITS1, G6pd and mkDNA using a panel of 99 DNA samples from tissue fragments collected from patients with confirmed CL. Both PCR-hsp70-234 bp and PCR-ITS1 detected Leishmania DNA in more than 70% of the samples. However, using hsp70-234 bp PCR-RFLP, identification of all of the Leishmania species associated with CL in Brazil can be achieved employing a simpler and cheaper electrophoresis protocol.
publishDate 2012
dc.date.none.fl_str_mv 2012-08
2017-12-07T04:58:14Z
2017-12-07T04:58:14Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv GRACA, Grazielle Cardoso da et al. Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species. Memórias do Instituto Oswaldo Cruz, Rio de Janeiro, v. 107, n. 5, p. 664-674, ago. 2012. DOI: https://doi.org/10.1590/S0074-02762012000500014. Disponível em: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762012000500014&lng=en&nrm=iso. Acesso em: 04 dez. 2020.
http://repositorio.unb.br/handle/10482/28305
https://dx.doi.org/10.1590/S0074-02762012000500014
identifier_str_mv GRACA, Grazielle Cardoso da et al. Development and validation of PCR-based assays for diagnosis of American cutaneous leishmaniasis and identificatio nof the parasite species. Memórias do Instituto Oswaldo Cruz, Rio de Janeiro, v. 107, n. 5, p. 664-674, ago. 2012. DOI: https://doi.org/10.1590/S0074-02762012000500014. Disponível em: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762012000500014&lng=en&nrm=iso. Acesso em: 04 dez. 2020.
url http://repositorio.unb.br/handle/10482/28305
https://dx.doi.org/10.1590/S0074-02762012000500014
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
publisher.none.fl_str_mv Instituto Oswaldo Cruz, Ministério da Saúde
dc.source.none.fl_str_mv reponame:Repositório Institucional da UnB
instname:Universidade de Brasília (UnB)
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instname_str Universidade de Brasília (UnB)
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reponame_str Repositório Institucional da UnB
collection Repositório Institucional da UnB
repository.name.fl_str_mv Repositório Institucional da UnB - Universidade de Brasília (UnB)
repository.mail.fl_str_mv repositorio@unb.br
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