Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.

Detalhes bibliográficos
Autor(a) principal: Cruz, Jorddy Neves da
Data de Publicação: 2021
Outros Autores: Silva, Lucas Barbosa da, Sousa Filho, João Soares de, Vale, Joyce Karen Lima
Tipo de documento: Artigo
Idioma: por
Título da fonte: Research, Society and Development
Texto Completo: https://rsdjournal.org/index.php/rsd/article/view/23087
Resumo: Leishmaniasis is a neglected disease and is considered one of the greatest endemic diseases in the world. The disease-causing parasites developed resistance against the drugs used in the disease's pharmacotherapy. Because of this, new compounds need to be devised to effectively treat this parasitosis. Therefore, in this paper we use molecular modeling approaches to design new inhibitors of the enzyme Dihydroorotate dehydrogenase (DHODH), a molecular target against leishmaniasis. Initially we used molecular modeling by homology to build the DHODH enzyme, later Metronidazole and Benznidazole were used as molecular frameworks for the development of new compounds. Then, the molecular docking method was applied to evaluate the interaction mode of the compounds with the binding site of the enzyme. The enzymatic model obtained 96% of its residues in favorable regions during its validation process. In the docking simulations, the compounds were able to interact favorably with the binding site and exhibit interactions with protein residues.
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spelling Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.Desarrollo de Nuevos Inhibidores de la Enzima Dihidroorotato Deshidrogenasa (DHODH) de Leishmania sp.Desenvolvimento de Novos Inibidores da Enzima Diidroorotato Desidrogenase (DHODH) de Leishmania sp.LeishmaniasisDHODHNew inhibitorsNitro derivatives.LeishmaniasisDHODHNuevos inhibidoresDerivados nitro.LeishmanioseDHODHNovos inibidoresNitroderivados. Leishmaniasis is a neglected disease and is considered one of the greatest endemic diseases in the world. The disease-causing parasites developed resistance against the drugs used in the disease's pharmacotherapy. Because of this, new compounds need to be devised to effectively treat this parasitosis. Therefore, in this paper we use molecular modeling approaches to design new inhibitors of the enzyme Dihydroorotate dehydrogenase (DHODH), a molecular target against leishmaniasis. Initially we used molecular modeling by homology to build the DHODH enzyme, later Metronidazole and Benznidazole were used as molecular frameworks for the development of new compounds. Then, the molecular docking method was applied to evaluate the interaction mode of the compounds with the binding site of the enzyme. The enzymatic model obtained 96% of its residues in favorable regions during its validation process. In the docking simulations, the compounds were able to interact favorably with the binding site and exhibit interactions with protein residues.La leishmaniasis es una enfermedad desatendida y se considera una de las mayores enfermedades endémicas del mundo. Los parásitos causantes de la enfermedad desarrollaron resistencia contra los fármacos utilizados en la farmacoterapia de la enfermedad. Debido a esto, es necesario diseñar nuevos compuestos para tratar eficazmente esta parasitosis. Por lo tanto, en este artículo utilizamos enfoques de modelado molecular para diseñar nuevos inhibidores de la enzima Dihidroorotato deshidrogenasa (DHODH), un objetivo molecular contra la leishmaniasis. Inicialmente usamos el modelado molecular por homología para construir la enzima DHODH, luego se usaron metronidazol y benznidazol como marcos moleculares para el desarrollo de nuevos compuestos. Luego, se aplicó el método de acoplamiento molecular para evaluar el modo de interacción de los compuestos con el sitio de unión de la enzima. El modelo enzimático obtuvo el 96% de sus residuos en regiones favorables durante su proceso de validación. En las simulaciones de acoplamiento, los compuestos pudieron interactuar favorablemente con el sitio de unión y exhibir interacciones con residuos de proteínas.A leishmaniose é uma doença negligenciada sendo considerada uma das maiores endemias do mundo. Os parasitas causadores da doença desenvolveram resistência contra os medicamentos utilizados na farmacoterapia da doença. Devido a isso, novos compostos precisam ser planejados para tratar com eficácia essa parasitose. Sendo assim, neste paper utilizamos abordagens de modelagem molecular para planejar novos inibidores da enzima Diidroorotato desidrogenase (DHODH), alvo molecular contra leishimaniose. Inicialmente utilizamos modelagem molecular por homologia para construir a enzima DHODH, posteriormente o Metronidazol e Benzonidazol foram utilizados como arcabouços moleculares para desenvolvimento dos novos compostos. Em seguida, o método de docking molecular foi aplicado para avaliar o modo de interação dos compostos com o sítio de ligação da enzima. O modelo enzimático obteve 96% de seus resíduos em regiões favoráveis durante seu processo de validação. Nas simulações de docking, os compostos foram capazes de interagir favoravelmente com o local de ligação e exibiram interações com resíduos da proteína.Research, Society and Development2021-12-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://rsdjournal.org/index.php/rsd/article/view/2308710.33448/rsd-v10i16.23087Research, Society and Development; Vol. 10 No. 16; e18101623087Research, Society and Development; Vol. 10 Núm. 16; e18101623087Research, Society and Development; v. 10 n. 16; e181016230872525-3409reponame:Research, Society and Developmentinstname:Universidade Federal de Itajubá (UNIFEI)instacron:UNIFEIporhttps://rsdjournal.org/index.php/rsd/article/view/23087/20653Copyright (c) 2021 Jorddy Neves da Cruz; Lucas Barbosa da Silva; João Soares de Sousa Filho; Joyce Karen Lima Valehttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessCruz, Jorddy Neves da Silva, Lucas Barbosa da Sousa Filho, João Soares de Vale, Joyce Karen Lima 2021-12-20T11:03:07Zoai:ojs.pkp.sfu.ca:article/23087Revistahttps://rsdjournal.org/index.php/rsd/indexPUBhttps://rsdjournal.org/index.php/rsd/oairsd.articles@gmail.com2525-34092525-3409opendoar:2024-01-17T09:42:04.005040Research, Society and Development - Universidade Federal de Itajubá (UNIFEI)false
dc.title.none.fl_str_mv Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
Desarrollo de Nuevos Inhibidores de la Enzima Dihidroorotato Deshidrogenasa (DHODH) de Leishmania sp.
Desenvolvimento de Novos Inibidores da Enzima Diidroorotato Desidrogenase (DHODH) de Leishmania sp.
title Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
spellingShingle Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
Cruz, Jorddy Neves da
Leishmaniasis
DHODH
New inhibitors
Nitro derivatives.
Leishmaniasis
DHODH
Nuevos inhibidores
Derivados nitro.
Leishmaniose
DHODH
Novos inibidores
Nitroderivados.
title_short Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
title_full Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
title_fullStr Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
title_full_unstemmed Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
title_sort Development of New Inhibitors of the Dihydroorotate Dehydrogenase Enzyme (DHODH) from Leishmania sp.
author Cruz, Jorddy Neves da
author_facet Cruz, Jorddy Neves da
Silva, Lucas Barbosa da
Sousa Filho, João Soares de
Vale, Joyce Karen Lima
author_role author
author2 Silva, Lucas Barbosa da
Sousa Filho, João Soares de
Vale, Joyce Karen Lima
author2_role author
author
author
dc.contributor.author.fl_str_mv Cruz, Jorddy Neves da
Silva, Lucas Barbosa da
Sousa Filho, João Soares de
Vale, Joyce Karen Lima
dc.subject.por.fl_str_mv Leishmaniasis
DHODH
New inhibitors
Nitro derivatives.
Leishmaniasis
DHODH
Nuevos inhibidores
Derivados nitro.
Leishmaniose
DHODH
Novos inibidores
Nitroderivados.
topic Leishmaniasis
DHODH
New inhibitors
Nitro derivatives.
Leishmaniasis
DHODH
Nuevos inhibidores
Derivados nitro.
Leishmaniose
DHODH
Novos inibidores
Nitroderivados.
description Leishmaniasis is a neglected disease and is considered one of the greatest endemic diseases in the world. The disease-causing parasites developed resistance against the drugs used in the disease's pharmacotherapy. Because of this, new compounds need to be devised to effectively treat this parasitosis. Therefore, in this paper we use molecular modeling approaches to design new inhibitors of the enzyme Dihydroorotate dehydrogenase (DHODH), a molecular target against leishmaniasis. Initially we used molecular modeling by homology to build the DHODH enzyme, later Metronidazole and Benznidazole were used as molecular frameworks for the development of new compounds. Then, the molecular docking method was applied to evaluate the interaction mode of the compounds with the binding site of the enzyme. The enzymatic model obtained 96% of its residues in favorable regions during its validation process. In the docking simulations, the compounds were able to interact favorably with the binding site and exhibit interactions with protein residues.
publishDate 2021
dc.date.none.fl_str_mv 2021-12-04
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://rsdjournal.org/index.php/rsd/article/view/23087
10.33448/rsd-v10i16.23087
url https://rsdjournal.org/index.php/rsd/article/view/23087
identifier_str_mv 10.33448/rsd-v10i16.23087
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://rsdjournal.org/index.php/rsd/article/view/23087/20653
dc.rights.driver.fl_str_mv https://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Research, Society and Development
publisher.none.fl_str_mv Research, Society and Development
dc.source.none.fl_str_mv Research, Society and Development; Vol. 10 No. 16; e18101623087
Research, Society and Development; Vol. 10 Núm. 16; e18101623087
Research, Society and Development; v. 10 n. 16; e18101623087
2525-3409
reponame:Research, Society and Development
instname:Universidade Federal de Itajubá (UNIFEI)
instacron:UNIFEI
instname_str Universidade Federal de Itajubá (UNIFEI)
instacron_str UNIFEI
institution UNIFEI
reponame_str Research, Society and Development
collection Research, Society and Development
repository.name.fl_str_mv Research, Society and Development - Universidade Federal de Itajubá (UNIFEI)
repository.mail.fl_str_mv rsd.articles@gmail.com
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