Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis

Detalhes bibliográficos
Autor(a) principal: Teresa Federici, Maria [UNESP]
Data de Publicação: 2012
Outros Autores: Marcondes, Jackson A. [UNESP], Picchi, Simone Cristina [UNESP], Stuchi, Eduardo S., Fadel, Andre Luiz, Laia, Marcelo L., Lemos, Manoel Victor F. [UNESP], Macedo Lemos, Eliana Gertrudes [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.2225/vol15-issue3-fulltext-4
http://hdl.handle.net/11449/1081
Resumo: Xylella fastidiosa inhabits the plant xylem, a nutrient-poor environment, so that mechanisms to sense and respond to adverse environmental conditions are extremely important for bacterial survival in the plant host. Although the complete genome sequences of different Xylella strains have been determined, little is known about stress responses and gene regulation in these organisms. In this work, a DNA microarray was constructed containing 2,600 ORFs identified in the genome sequencing project of Xylella fastidiosa 9a5c strain, and used to check global gene expression differences in the bacteria when it is infecting a symptomatic and a tolerant citrus tree. Different patterns of expression were found in each variety, suggesting that bacteria are responding differentially according to each plant xylem environment. The global gene expression profile was determined and several genes related to bacterial survival in stressed conditions were found to be differentially expressed between varieties, suggesting the involvement of different strategies for adaptation to the environment. The expression pattern of some genes related to the heat shock response, toxin and detoxification processes, adaptation to atypical conditions, repair systems as well as some regulatory genes are discussed in this paper. DNA microarray proved to be a powerful technique for global transcriptome analyses. This is one of the first studies of Xylella fastidiosa gene expression in vivo which helped to increase insight into stress responses and possible bacterial survival mechanisms in the nutrient-poor environment of xylem vessels.
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spelling Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysisCitrusMicroarrayXylella fastidiosaXylella fastidiosa inhabits the plant xylem, a nutrient-poor environment, so that mechanisms to sense and respond to adverse environmental conditions are extremely important for bacterial survival in the plant host. Although the complete genome sequences of different Xylella strains have been determined, little is known about stress responses and gene regulation in these organisms. In this work, a DNA microarray was constructed containing 2,600 ORFs identified in the genome sequencing project of Xylella fastidiosa 9a5c strain, and used to check global gene expression differences in the bacteria when it is infecting a symptomatic and a tolerant citrus tree. Different patterns of expression were found in each variety, suggesting that bacteria are responding differentially according to each plant xylem environment. The global gene expression profile was determined and several genes related to bacterial survival in stressed conditions were found to be differentially expressed between varieties, suggesting the involvement of different strategies for adaptation to the environment. The expression pattern of some genes related to the heat shock response, toxin and detoxification processes, adaptation to atypical conditions, repair systems as well as some regulatory genes are discussed in this paper. DNA microarray proved to be a powerful technique for global transcriptome analyses. This is one of the first studies of Xylella fastidiosa gene expression in vivo which helped to increase insight into stress responses and possible bacterial survival mechanisms in the nutrient-poor environment of xylem vessels.Ministry of Culture of Uruguay through the Program for Technical Development (PDT)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)National Institute of Agronomic Research of Uruguay (INIA)INIA, Estn Expt Wilson Ferreira Aldunate, Unidad Biotecnol, Rincon Del Colorado, UruguayUniv Estadual Paulista, Fac Ciencias Agr & Vet, Dept Tecnol, Lab Bioquim Microrganismos & Plantas, Jaboticabal, BrazilEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA) Mandioca & Fruticultura, Nucl Tecnol Recursos Gen & Desenvolvimento Varien, Cruz Das Almas, BA, BrazilEstacao Expt Citricultura, São Paulo, BrazilUniv São Paulo, Escola Super Agr Luiz de Queiroz, São Paulo, BrazilUniv Fed Vales Jequitinhonha & Mucuri, Fac Ciencias Vet, Dept Engn Florestal, Diamantina, MG, BrazilCtr Citricultura Sylvio Moreira APTA, Cordeiropolis, SP, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, Dept Biol Aplicada Agropecuaria, Jaboticabal, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, Dept Tecnol, Lab Bioquim Microrganismos & Plantas, Jaboticabal, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, Dept Biol Aplicada Agropecuaria, Jaboticabal, BrazilUniversidade Católica de ValparaísoINIAUniversidade Estadual Paulista (Unesp)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Estacao Expt CitriculturaUniversidade de São Paulo (USP)Univ Fed Vales Jequitinhonha & MucuriAgência Paulista de Tecnologia dos Agronegócios (APTA)Teresa Federici, Maria [UNESP]Marcondes, Jackson A. [UNESP]Picchi, Simone Cristina [UNESP]Stuchi, Eduardo S.Fadel, Andre LuizLaia, Marcelo L.Lemos, Manoel Victor F. [UNESP]Macedo Lemos, Eliana Gertrudes [UNESP]2014-05-20T13:13:13Z2014-05-20T13:13:13Z2012-05-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article33http://dx.doi.org/10.2225/vol15-issue3-fulltext-4Electronic Journal of Biotechnology. Valparaiso: Univ Catolica de Valparaiso, v. 15, n. 3, p. 33, 2012.0717-3458http://hdl.handle.net/11449/108110.2225/vol15-issue3-fulltext-4WOS:000307004200004Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengElectronic Journal of Biotechnology1.8810,537info:eu-repo/semantics/openAccess2021-10-23T01:35:36Zoai:repositorio.unesp.br:11449/1081Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T01:35:36Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
title Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
spellingShingle Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
Teresa Federici, Maria [UNESP]
Citrus
Microarray
Xylella fastidiosa
title_short Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
title_full Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
title_fullStr Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
title_full_unstemmed Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
title_sort Xylella fastidiosa: An in vivo system to study possible survival strategies within citrus xylem vessels based on global gene expression analysis
author Teresa Federici, Maria [UNESP]
author_facet Teresa Federici, Maria [UNESP]
Marcondes, Jackson A. [UNESP]
Picchi, Simone Cristina [UNESP]
Stuchi, Eduardo S.
Fadel, Andre Luiz
Laia, Marcelo L.
Lemos, Manoel Victor F. [UNESP]
Macedo Lemos, Eliana Gertrudes [UNESP]
author_role author
author2 Marcondes, Jackson A. [UNESP]
Picchi, Simone Cristina [UNESP]
Stuchi, Eduardo S.
Fadel, Andre Luiz
Laia, Marcelo L.
Lemos, Manoel Victor F. [UNESP]
Macedo Lemos, Eliana Gertrudes [UNESP]
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv INIA
Universidade Estadual Paulista (Unesp)
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
Estacao Expt Citricultura
Universidade de São Paulo (USP)
Univ Fed Vales Jequitinhonha & Mucuri
Agência Paulista de Tecnologia dos Agronegócios (APTA)
dc.contributor.author.fl_str_mv Teresa Federici, Maria [UNESP]
Marcondes, Jackson A. [UNESP]
Picchi, Simone Cristina [UNESP]
Stuchi, Eduardo S.
Fadel, Andre Luiz
Laia, Marcelo L.
Lemos, Manoel Victor F. [UNESP]
Macedo Lemos, Eliana Gertrudes [UNESP]
dc.subject.por.fl_str_mv Citrus
Microarray
Xylella fastidiosa
topic Citrus
Microarray
Xylella fastidiosa
description Xylella fastidiosa inhabits the plant xylem, a nutrient-poor environment, so that mechanisms to sense and respond to adverse environmental conditions are extremely important for bacterial survival in the plant host. Although the complete genome sequences of different Xylella strains have been determined, little is known about stress responses and gene regulation in these organisms. In this work, a DNA microarray was constructed containing 2,600 ORFs identified in the genome sequencing project of Xylella fastidiosa 9a5c strain, and used to check global gene expression differences in the bacteria when it is infecting a symptomatic and a tolerant citrus tree. Different patterns of expression were found in each variety, suggesting that bacteria are responding differentially according to each plant xylem environment. The global gene expression profile was determined and several genes related to bacterial survival in stressed conditions were found to be differentially expressed between varieties, suggesting the involvement of different strategies for adaptation to the environment. The expression pattern of some genes related to the heat shock response, toxin and detoxification processes, adaptation to atypical conditions, repair systems as well as some regulatory genes are discussed in this paper. DNA microarray proved to be a powerful technique for global transcriptome analyses. This is one of the first studies of Xylella fastidiosa gene expression in vivo which helped to increase insight into stress responses and possible bacterial survival mechanisms in the nutrient-poor environment of xylem vessels.
publishDate 2012
dc.date.none.fl_str_mv 2012-05-15
2014-05-20T13:13:13Z
2014-05-20T13:13:13Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.2225/vol15-issue3-fulltext-4
Electronic Journal of Biotechnology. Valparaiso: Univ Catolica de Valparaiso, v. 15, n. 3, p. 33, 2012.
0717-3458
http://hdl.handle.net/11449/1081
10.2225/vol15-issue3-fulltext-4
WOS:000307004200004
url http://dx.doi.org/10.2225/vol15-issue3-fulltext-4
http://hdl.handle.net/11449/1081
identifier_str_mv Electronic Journal of Biotechnology. Valparaiso: Univ Catolica de Valparaiso, v. 15, n. 3, p. 33, 2012.
0717-3458
10.2225/vol15-issue3-fulltext-4
WOS:000307004200004
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Electronic Journal of Biotechnology
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dc.format.none.fl_str_mv 33
dc.publisher.none.fl_str_mv Universidade Católica de Valparaíso
publisher.none.fl_str_mv Universidade Católica de Valparaíso
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
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repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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