Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers

Detalhes bibliográficos
Autor(a) principal: Pavan, Bruno Ettore [UNESP]
Data de Publicação: 2006
Outros Autores: De Paula, Rinaldo César [UNESP], Sena, Janete Apparecida Desidério [UNESP], Bonine, César Augusto Valencise, Scarpinatti, Edimar Aparecido
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.12702/1984-7033.v06n03a02
http://hdl.handle.net/11449/69061
Resumo: The genetic divergence in 20 Eucalyptus spp. clones was evaluated by multivariate techniques based on 167 RAPD markers, of which 155 were polymorphic and 12 monomorphic. The measures of genetic distances were obtained by the arithmetic complement of the coefficients of Jaccard and of Sorenso-Nei and Li and evaluated by the hierarchical methods of Single Linkage clustering and Unweighted Pair Group Method with Arithmetic Mean (UPGMA). Independent of the dissimilarity coefficient, the greatest divergence was found between clones 7 and 17 and the smallest between the clones 11 and 14. Clone clustering was little influenced by the applied procedure so that, adopting the same percentage of divergence, the UPGMA identified two groups less for the coefficient of Sorenso-Nei and Li. The clones evidenced considerable genetic divergence, which is partly associated to the origin of the study material. The clusters formed by the UPGMA clustering algorithm associated to the arithmetic complement of Jaccard were most consistent.
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spelling Genetic divergence in Eucalyptus spp. clones by molecular RAPD markersClustering analysisDissimilarityEucalyptRAPDEucalyptusThe genetic divergence in 20 Eucalyptus spp. clones was evaluated by multivariate techniques based on 167 RAPD markers, of which 155 were polymorphic and 12 monomorphic. The measures of genetic distances were obtained by the arithmetic complement of the coefficients of Jaccard and of Sorenso-Nei and Li and evaluated by the hierarchical methods of Single Linkage clustering and Unweighted Pair Group Method with Arithmetic Mean (UPGMA). Independent of the dissimilarity coefficient, the greatest divergence was found between clones 7 and 17 and the smallest between the clones 11 and 14. Clone clustering was little influenced by the applied procedure so that, adopting the same percentage of divergence, the UPGMA identified two groups less for the coefficient of Sorenso-Nei and Li. The clones evidenced considerable genetic divergence, which is partly associated to the origin of the study material. The clusters formed by the UPGMA clustering algorithm associated to the arithmetic complement of Jaccard were most consistent.Faculdade de Ciências Agrárias e Veterinárias (FCAV) Universidade Estadual Paulista (UNESP) Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, s/n, 14.884-900, Jaboticabal, SPDepartamento de Produção Vegetal FCAV-UNESPDepartamento de Biologia Aplicada À Agropecuária FCAV-UNESPVotorantim Celulose e Papel S.A. Unidade Jacareí, Rodovia General Euryale de Jesus Zerbini, SP 66, km 84, 12.340-010, Jacareí, SPVotorantim Celulose e Papel S.A. Unidade Três Lagoas, Rodovia MS 395, km 20, 79.601-970, Três Lagoas, MSFaculdade de Ciências Agrárias e Veterinárias (FCAV) Universidade Estadual Paulista (UNESP) Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, s/n, 14.884-900, Jaboticabal, SPDepartamento de Produção Vegetal FCAV-UNESPDepartamento de Biologia Aplicada À Agropecuária FCAV-UNESPUniversidade Estadual Paulista (Unesp)Unidade JacareíUnidade Três LagoasPavan, Bruno Ettore [UNESP]De Paula, Rinaldo César [UNESP]Sena, Janete Apparecida Desidério [UNESP]Bonine, César Augusto ValenciseScarpinatti, Edimar Aparecido2014-05-27T11:21:57Z2014-05-27T11:21:57Z2006-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article194-202application/pdfhttp://dx.doi.org/10.12702/1984-7033.v06n03a02Crop Breeding and Applied Biotechnology, v. 6, n. 3, p. 194-202, 2006.1518-7853http://hdl.handle.net/11449/6906110.12702/1984-7033.v06n03a022-s2.0-411491447762-s2.0-41149144776.pdf182062610008102712950513405918360000-0001-9088-3924Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCrop Breeding and Applied Biotechnology0,609info:eu-repo/semantics/openAccess2024-06-07T13:57:42Zoai:repositorio.unesp.br:11449/69061Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:05:29.870777Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
title Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
spellingShingle Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
Pavan, Bruno Ettore [UNESP]
Clustering analysis
Dissimilarity
Eucalypt
RAPD
Eucalyptus
title_short Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
title_full Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
title_fullStr Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
title_full_unstemmed Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
title_sort Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
author Pavan, Bruno Ettore [UNESP]
author_facet Pavan, Bruno Ettore [UNESP]
De Paula, Rinaldo César [UNESP]
Sena, Janete Apparecida Desidério [UNESP]
Bonine, César Augusto Valencise
Scarpinatti, Edimar Aparecido
author_role author
author2 De Paula, Rinaldo César [UNESP]
Sena, Janete Apparecida Desidério [UNESP]
Bonine, César Augusto Valencise
Scarpinatti, Edimar Aparecido
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Unidade Jacareí
Unidade Três Lagoas
dc.contributor.author.fl_str_mv Pavan, Bruno Ettore [UNESP]
De Paula, Rinaldo César [UNESP]
Sena, Janete Apparecida Desidério [UNESP]
Bonine, César Augusto Valencise
Scarpinatti, Edimar Aparecido
dc.subject.por.fl_str_mv Clustering analysis
Dissimilarity
Eucalypt
RAPD
Eucalyptus
topic Clustering analysis
Dissimilarity
Eucalypt
RAPD
Eucalyptus
description The genetic divergence in 20 Eucalyptus spp. clones was evaluated by multivariate techniques based on 167 RAPD markers, of which 155 were polymorphic and 12 monomorphic. The measures of genetic distances were obtained by the arithmetic complement of the coefficients of Jaccard and of Sorenso-Nei and Li and evaluated by the hierarchical methods of Single Linkage clustering and Unweighted Pair Group Method with Arithmetic Mean (UPGMA). Independent of the dissimilarity coefficient, the greatest divergence was found between clones 7 and 17 and the smallest between the clones 11 and 14. Clone clustering was little influenced by the applied procedure so that, adopting the same percentage of divergence, the UPGMA identified two groups less for the coefficient of Sorenso-Nei and Li. The clones evidenced considerable genetic divergence, which is partly associated to the origin of the study material. The clusters formed by the UPGMA clustering algorithm associated to the arithmetic complement of Jaccard were most consistent.
publishDate 2006
dc.date.none.fl_str_mv 2006-09-01
2014-05-27T11:21:57Z
2014-05-27T11:21:57Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.12702/1984-7033.v06n03a02
Crop Breeding and Applied Biotechnology, v. 6, n. 3, p. 194-202, 2006.
1518-7853
http://hdl.handle.net/11449/69061
10.12702/1984-7033.v06n03a02
2-s2.0-41149144776
2-s2.0-41149144776.pdf
1820626100081027
1295051340591836
0000-0001-9088-3924
url http://dx.doi.org/10.12702/1984-7033.v06n03a02
http://hdl.handle.net/11449/69061
identifier_str_mv Crop Breeding and Applied Biotechnology, v. 6, n. 3, p. 194-202, 2006.
1518-7853
10.12702/1984-7033.v06n03a02
2-s2.0-41149144776
2-s2.0-41149144776.pdf
1820626100081027
1295051340591836
0000-0001-9088-3924
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Crop Breeding and Applied Biotechnology
0,609
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 194-202
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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