Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers
Autor(a) principal: | |
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Data de Publicação: | 2006 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.12702/1984-7033.v06n03a02 http://hdl.handle.net/11449/69061 |
Resumo: | The genetic divergence in 20 Eucalyptus spp. clones was evaluated by multivariate techniques based on 167 RAPD markers, of which 155 were polymorphic and 12 monomorphic. The measures of genetic distances were obtained by the arithmetic complement of the coefficients of Jaccard and of Sorenso-Nei and Li and evaluated by the hierarchical methods of Single Linkage clustering and Unweighted Pair Group Method with Arithmetic Mean (UPGMA). Independent of the dissimilarity coefficient, the greatest divergence was found between clones 7 and 17 and the smallest between the clones 11 and 14. Clone clustering was little influenced by the applied procedure so that, adopting the same percentage of divergence, the UPGMA identified two groups less for the coefficient of Sorenso-Nei and Li. The clones evidenced considerable genetic divergence, which is partly associated to the origin of the study material. The clusters formed by the UPGMA clustering algorithm associated to the arithmetic complement of Jaccard were most consistent. |
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Genetic divergence in Eucalyptus spp. clones by molecular RAPD markersClustering analysisDissimilarityEucalyptRAPDEucalyptusThe genetic divergence in 20 Eucalyptus spp. clones was evaluated by multivariate techniques based on 167 RAPD markers, of which 155 were polymorphic and 12 monomorphic. The measures of genetic distances were obtained by the arithmetic complement of the coefficients of Jaccard and of Sorenso-Nei and Li and evaluated by the hierarchical methods of Single Linkage clustering and Unweighted Pair Group Method with Arithmetic Mean (UPGMA). Independent of the dissimilarity coefficient, the greatest divergence was found between clones 7 and 17 and the smallest between the clones 11 and 14. Clone clustering was little influenced by the applied procedure so that, adopting the same percentage of divergence, the UPGMA identified two groups less for the coefficient of Sorenso-Nei and Li. The clones evidenced considerable genetic divergence, which is partly associated to the origin of the study material. The clusters formed by the UPGMA clustering algorithm associated to the arithmetic complement of Jaccard were most consistent.Faculdade de Ciências Agrárias e Veterinárias (FCAV) Universidade Estadual Paulista (UNESP) Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, s/n, 14.884-900, Jaboticabal, SPDepartamento de Produção Vegetal FCAV-UNESPDepartamento de Biologia Aplicada À Agropecuária FCAV-UNESPVotorantim Celulose e Papel S.A. Unidade Jacareí, Rodovia General Euryale de Jesus Zerbini, SP 66, km 84, 12.340-010, Jacareí, SPVotorantim Celulose e Papel S.A. Unidade Três Lagoas, Rodovia MS 395, km 20, 79.601-970, Três Lagoas, MSFaculdade de Ciências Agrárias e Veterinárias (FCAV) Universidade Estadual Paulista (UNESP) Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, s/n, 14.884-900, Jaboticabal, SPDepartamento de Produção Vegetal FCAV-UNESPDepartamento de Biologia Aplicada À Agropecuária FCAV-UNESPUniversidade Estadual Paulista (Unesp)Unidade JacareíUnidade Três LagoasPavan, Bruno Ettore [UNESP]De Paula, Rinaldo César [UNESP]Sena, Janete Apparecida Desidério [UNESP]Bonine, César Augusto ValenciseScarpinatti, Edimar Aparecido2014-05-27T11:21:57Z2014-05-27T11:21:57Z2006-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article194-202application/pdfhttp://dx.doi.org/10.12702/1984-7033.v06n03a02Crop Breeding and Applied Biotechnology, v. 6, n. 3, p. 194-202, 2006.1518-7853http://hdl.handle.net/11449/6906110.12702/1984-7033.v06n03a022-s2.0-411491447762-s2.0-41149144776.pdf182062610008102712950513405918360000-0001-9088-3924Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCrop Breeding and Applied Biotechnology0,609info:eu-repo/semantics/openAccess2024-06-07T13:57:42Zoai:repositorio.unesp.br:11449/69061Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:05:29.870777Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
title |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
spellingShingle |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers Pavan, Bruno Ettore [UNESP] Clustering analysis Dissimilarity Eucalypt RAPD Eucalyptus |
title_short |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
title_full |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
title_fullStr |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
title_full_unstemmed |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
title_sort |
Genetic divergence in Eucalyptus spp. clones by molecular RAPD markers |
author |
Pavan, Bruno Ettore [UNESP] |
author_facet |
Pavan, Bruno Ettore [UNESP] De Paula, Rinaldo César [UNESP] Sena, Janete Apparecida Desidério [UNESP] Bonine, César Augusto Valencise Scarpinatti, Edimar Aparecido |
author_role |
author |
author2 |
De Paula, Rinaldo César [UNESP] Sena, Janete Apparecida Desidério [UNESP] Bonine, César Augusto Valencise Scarpinatti, Edimar Aparecido |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Unidade Jacareí Unidade Três Lagoas |
dc.contributor.author.fl_str_mv |
Pavan, Bruno Ettore [UNESP] De Paula, Rinaldo César [UNESP] Sena, Janete Apparecida Desidério [UNESP] Bonine, César Augusto Valencise Scarpinatti, Edimar Aparecido |
dc.subject.por.fl_str_mv |
Clustering analysis Dissimilarity Eucalypt RAPD Eucalyptus |
topic |
Clustering analysis Dissimilarity Eucalypt RAPD Eucalyptus |
description |
The genetic divergence in 20 Eucalyptus spp. clones was evaluated by multivariate techniques based on 167 RAPD markers, of which 155 were polymorphic and 12 monomorphic. The measures of genetic distances were obtained by the arithmetic complement of the coefficients of Jaccard and of Sorenso-Nei and Li and evaluated by the hierarchical methods of Single Linkage clustering and Unweighted Pair Group Method with Arithmetic Mean (UPGMA). Independent of the dissimilarity coefficient, the greatest divergence was found between clones 7 and 17 and the smallest between the clones 11 and 14. Clone clustering was little influenced by the applied procedure so that, adopting the same percentage of divergence, the UPGMA identified two groups less for the coefficient of Sorenso-Nei and Li. The clones evidenced considerable genetic divergence, which is partly associated to the origin of the study material. The clusters formed by the UPGMA clustering algorithm associated to the arithmetic complement of Jaccard were most consistent. |
publishDate |
2006 |
dc.date.none.fl_str_mv |
2006-09-01 2014-05-27T11:21:57Z 2014-05-27T11:21:57Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.12702/1984-7033.v06n03a02 Crop Breeding and Applied Biotechnology, v. 6, n. 3, p. 194-202, 2006. 1518-7853 http://hdl.handle.net/11449/69061 10.12702/1984-7033.v06n03a02 2-s2.0-41149144776 2-s2.0-41149144776.pdf 1820626100081027 1295051340591836 0000-0001-9088-3924 |
url |
http://dx.doi.org/10.12702/1984-7033.v06n03a02 http://hdl.handle.net/11449/69061 |
identifier_str_mv |
Crop Breeding and Applied Biotechnology, v. 6, n. 3, p. 194-202, 2006. 1518-7853 10.12702/1984-7033.v06n03a02 2-s2.0-41149144776 2-s2.0-41149144776.pdf 1820626100081027 1295051340591836 0000-0001-9088-3924 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Crop Breeding and Applied Biotechnology 0,609 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
194-202 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808129489385816064 |