Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1080/15287394.2017.1395581 http://hdl.handle.net/11449/175785 |
Resumo: | Bothrops insularis, known as the golden lancehead snake, has its natural habitat restricted to Queimada Grande Island on the southern coast of Brazil. This culture-dependent study aimed to identify microorganisms obtained from the mouth, eyes, and cloaca of this species. Swabs from 20 snakes were collected for fungal and bacterial isolation. DNA was extracted from all samples, and identification was performed by amplifying the ITS1-5.8S-ITS2 regions and the 16S rDNA gene, respectively. All strains were identified and deposited in the GenBank nucleotide database. MEGA v6.0 software was utilized to construct phylogenetic trees. In total, 100 strains were isolated and characterized, from which 42 fungi were distributed into 23 species and 58 bacteria into 13 species. The genus Fusarium was predominant since 11 strains and probably a new species was isolated from this fungus. Pseudomonas aeruginosa and Enterococcus faecalis were the predominant groups of aerobic bacteria isolated. Phylogenetic analyses between bacterial and fungal sequences suggest a similarity between the microorganisms found on the island and on the continent. These findings may be attributed to anthropic actions resulting from both expeditions to the island and actions of migratory birds, which are the main sources of food for snakes. |
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Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiotaBothrops insularis, known as the golden lancehead snake, has its natural habitat restricted to Queimada Grande Island on the southern coast of Brazil. This culture-dependent study aimed to identify microorganisms obtained from the mouth, eyes, and cloaca of this species. Swabs from 20 snakes were collected for fungal and bacterial isolation. DNA was extracted from all samples, and identification was performed by amplifying the ITS1-5.8S-ITS2 regions and the 16S rDNA gene, respectively. All strains were identified and deposited in the GenBank nucleotide database. MEGA v6.0 software was utilized to construct phylogenetic trees. In total, 100 strains were isolated and characterized, from which 42 fungi were distributed into 23 species and 58 bacteria into 13 species. The genus Fusarium was predominant since 11 strains and probably a new species was isolated from this fungus. Pseudomonas aeruginosa and Enterococcus faecalis were the predominant groups of aerobic bacteria isolated. Phylogenetic analyses between bacterial and fungal sequences suggest a similarity between the microorganisms found on the island and on the continent. These findings may be attributed to anthropic actions resulting from both expeditions to the island and actions of migratory birds, which are the main sources of food for snakes.Center for the Study of Venoms and Venomous Animals (CEVAP) Sao Paulo State University (UNESP)Department of Microbiology and Immunology Institute of Biosciences of Botucatu Sao Paulo State University (UNESP)Graduate Program in Tropical Diseases Botucatu Medical School Sao Paulo State University (UNESP)Center for the Study of Venoms and Venomous Animals (CEVAP) Sao Paulo State University (UNESP)Department of Microbiology and Immunology Institute of Biosciences of Botucatu Sao Paulo State University (UNESP)Graduate Program in Tropical Diseases Botucatu Medical School Sao Paulo State University (UNESP)Universidade Estadual Paulista (Unesp)Barbosa, Lidiane Nunes [UNESP]Ferreira, Rui Seabra [UNESP]Luiza Mello, Priscila [UNESP]Garcia Garces, Hans [UNESP]Luana Chechi, Jéssica [UNESP]Frachin, Tarsila [UNESP]De Barros, Luciana Curtolo [UNESP]De Moraes Guimenes Bosco, Sandra [UNESP]Bagagli, Eduardo [UNESP]Fernandes Júnior, Ary [UNESP]Barraviera, Benedito [UNESP]Delazari Dos Santos, Lucilene [UNESP]2018-12-11T17:17:29Z2018-12-11T17:17:29Z2018-03-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article142-153application/pdfhttp://dx.doi.org/10.1080/15287394.2017.1395581Journal of Toxicology and Environmental Health - Part A: Current Issues, v. 81, n. 6, p. 142-153, 2018.1087-26201528-7394http://hdl.handle.net/11449/17578510.1080/15287394.2017.13955812-s2.0-850410065862-s2.0-85041006586.pdf33203275704295390000-0002-8003-4109Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Toxicology and Environmental Health - Part A: Current Issues0,8880,888info:eu-repo/semantics/openAccess2024-08-15T15:23:01Zoai:repositorio.unesp.br:11449/175785Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-15T15:23:01Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
title |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
spellingShingle |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota Barbosa, Lidiane Nunes [UNESP] |
title_short |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
title_full |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
title_fullStr |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
title_full_unstemmed |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
title_sort |
Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota |
author |
Barbosa, Lidiane Nunes [UNESP] |
author_facet |
Barbosa, Lidiane Nunes [UNESP] Ferreira, Rui Seabra [UNESP] Luiza Mello, Priscila [UNESP] Garcia Garces, Hans [UNESP] Luana Chechi, Jéssica [UNESP] Frachin, Tarsila [UNESP] De Barros, Luciana Curtolo [UNESP] De Moraes Guimenes Bosco, Sandra [UNESP] Bagagli, Eduardo [UNESP] Fernandes Júnior, Ary [UNESP] Barraviera, Benedito [UNESP] Delazari Dos Santos, Lucilene [UNESP] |
author_role |
author |
author2 |
Ferreira, Rui Seabra [UNESP] Luiza Mello, Priscila [UNESP] Garcia Garces, Hans [UNESP] Luana Chechi, Jéssica [UNESP] Frachin, Tarsila [UNESP] De Barros, Luciana Curtolo [UNESP] De Moraes Guimenes Bosco, Sandra [UNESP] Bagagli, Eduardo [UNESP] Fernandes Júnior, Ary [UNESP] Barraviera, Benedito [UNESP] Delazari Dos Santos, Lucilene [UNESP] |
author2_role |
author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Barbosa, Lidiane Nunes [UNESP] Ferreira, Rui Seabra [UNESP] Luiza Mello, Priscila [UNESP] Garcia Garces, Hans [UNESP] Luana Chechi, Jéssica [UNESP] Frachin, Tarsila [UNESP] De Barros, Luciana Curtolo [UNESP] De Moraes Guimenes Bosco, Sandra [UNESP] Bagagli, Eduardo [UNESP] Fernandes Júnior, Ary [UNESP] Barraviera, Benedito [UNESP] Delazari Dos Santos, Lucilene [UNESP] |
description |
Bothrops insularis, known as the golden lancehead snake, has its natural habitat restricted to Queimada Grande Island on the southern coast of Brazil. This culture-dependent study aimed to identify microorganisms obtained from the mouth, eyes, and cloaca of this species. Swabs from 20 snakes were collected for fungal and bacterial isolation. DNA was extracted from all samples, and identification was performed by amplifying the ITS1-5.8S-ITS2 regions and the 16S rDNA gene, respectively. All strains were identified and deposited in the GenBank nucleotide database. MEGA v6.0 software was utilized to construct phylogenetic trees. In total, 100 strains were isolated and characterized, from which 42 fungi were distributed into 23 species and 58 bacteria into 13 species. The genus Fusarium was predominant since 11 strains and probably a new species was isolated from this fungus. Pseudomonas aeruginosa and Enterococcus faecalis were the predominant groups of aerobic bacteria isolated. Phylogenetic analyses between bacterial and fungal sequences suggest a similarity between the microorganisms found on the island and on the continent. These findings may be attributed to anthropic actions resulting from both expeditions to the island and actions of migratory birds, which are the main sources of food for snakes. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-12-11T17:17:29Z 2018-12-11T17:17:29Z 2018-03-19 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1080/15287394.2017.1395581 Journal of Toxicology and Environmental Health - Part A: Current Issues, v. 81, n. 6, p. 142-153, 2018. 1087-2620 1528-7394 http://hdl.handle.net/11449/175785 10.1080/15287394.2017.1395581 2-s2.0-85041006586 2-s2.0-85041006586.pdf 3320327570429539 0000-0002-8003-4109 |
url |
http://dx.doi.org/10.1080/15287394.2017.1395581 http://hdl.handle.net/11449/175785 |
identifier_str_mv |
Journal of Toxicology and Environmental Health - Part A: Current Issues, v. 81, n. 6, p. 142-153, 2018. 1087-2620 1528-7394 10.1080/15287394.2017.1395581 2-s2.0-85041006586 2-s2.0-85041006586.pdf 3320327570429539 0000-0002-8003-4109 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Toxicology and Environmental Health - Part A: Current Issues 0,888 0,888 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
142-153 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808128164057055232 |