Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota

Detalhes bibliográficos
Autor(a) principal: Barbosa, Lidiane Nunes [UNESP]
Data de Publicação: 2018
Outros Autores: Ferreira, Rui Seabra [UNESP], Luiza Mello, Priscila [UNESP], Garcia Garces, Hans [UNESP], Luana Chechi, Jéssica [UNESP], Frachin, Tarsila [UNESP], De Barros, Luciana Curtolo [UNESP], De Moraes Guimenes Bosco, Sandra [UNESP], Bagagli, Eduardo [UNESP], Fernandes Júnior, Ary [UNESP], Barraviera, Benedito [UNESP], Delazari Dos Santos, Lucilene [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/15287394.2017.1395581
http://hdl.handle.net/11449/175785
Resumo: Bothrops insularis, known as the golden lancehead snake, has its natural habitat restricted to Queimada Grande Island on the southern coast of Brazil. This culture-dependent study aimed to identify microorganisms obtained from the mouth, eyes, and cloaca of this species. Swabs from 20 snakes were collected for fungal and bacterial isolation. DNA was extracted from all samples, and identification was performed by amplifying the ITS1-5.8S-ITS2 regions and the 16S rDNA gene, respectively. All strains were identified and deposited in the GenBank nucleotide database. MEGA v6.0 software was utilized to construct phylogenetic trees. In total, 100 strains were isolated and characterized, from which 42 fungi were distributed into 23 species and 58 bacteria into 13 species. The genus Fusarium was predominant since 11 strains and probably a new species was isolated from this fungus. Pseudomonas aeruginosa and Enterococcus faecalis were the predominant groups of aerobic bacteria isolated. Phylogenetic analyses between bacterial and fungal sequences suggest a similarity between the microorganisms found on the island and on the continent. These findings may be attributed to anthropic actions resulting from both expeditions to the island and actions of migratory birds, which are the main sources of food for snakes.
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spelling Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiotaBothrops insularis, known as the golden lancehead snake, has its natural habitat restricted to Queimada Grande Island on the southern coast of Brazil. This culture-dependent study aimed to identify microorganisms obtained from the mouth, eyes, and cloaca of this species. Swabs from 20 snakes were collected for fungal and bacterial isolation. DNA was extracted from all samples, and identification was performed by amplifying the ITS1-5.8S-ITS2 regions and the 16S rDNA gene, respectively. All strains were identified and deposited in the GenBank nucleotide database. MEGA v6.0 software was utilized to construct phylogenetic trees. In total, 100 strains were isolated and characterized, from which 42 fungi were distributed into 23 species and 58 bacteria into 13 species. The genus Fusarium was predominant since 11 strains and probably a new species was isolated from this fungus. Pseudomonas aeruginosa and Enterococcus faecalis were the predominant groups of aerobic bacteria isolated. Phylogenetic analyses between bacterial and fungal sequences suggest a similarity between the microorganisms found on the island and on the continent. These findings may be attributed to anthropic actions resulting from both expeditions to the island and actions of migratory birds, which are the main sources of food for snakes.Center for the Study of Venoms and Venomous Animals (CEVAP) Sao Paulo State University (UNESP)Department of Microbiology and Immunology Institute of Biosciences of Botucatu Sao Paulo State University (UNESP)Graduate Program in Tropical Diseases Botucatu Medical School Sao Paulo State University (UNESP)Center for the Study of Venoms and Venomous Animals (CEVAP) Sao Paulo State University (UNESP)Department of Microbiology and Immunology Institute of Biosciences of Botucatu Sao Paulo State University (UNESP)Graduate Program in Tropical Diseases Botucatu Medical School Sao Paulo State University (UNESP)Universidade Estadual Paulista (Unesp)Barbosa, Lidiane Nunes [UNESP]Ferreira, Rui Seabra [UNESP]Luiza Mello, Priscila [UNESP]Garcia Garces, Hans [UNESP]Luana Chechi, Jéssica [UNESP]Frachin, Tarsila [UNESP]De Barros, Luciana Curtolo [UNESP]De Moraes Guimenes Bosco, Sandra [UNESP]Bagagli, Eduardo [UNESP]Fernandes Júnior, Ary [UNESP]Barraviera, Benedito [UNESP]Delazari Dos Santos, Lucilene [UNESP]2018-12-11T17:17:29Z2018-12-11T17:17:29Z2018-03-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article142-153application/pdfhttp://dx.doi.org/10.1080/15287394.2017.1395581Journal of Toxicology and Environmental Health - Part A: Current Issues, v. 81, n. 6, p. 142-153, 2018.1087-26201528-7394http://hdl.handle.net/11449/17578510.1080/15287394.2017.13955812-s2.0-850410065862-s2.0-85041006586.pdf33203275704295390000-0002-8003-4109Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Toxicology and Environmental Health - Part A: Current Issues0,8880,888info:eu-repo/semantics/openAccess2024-08-15T15:23:01Zoai:repositorio.unesp.br:11449/175785Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-15T15:23:01Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
title Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
spellingShingle Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
Barbosa, Lidiane Nunes [UNESP]
title_short Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
title_full Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
title_fullStr Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
title_full_unstemmed Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
title_sort Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota
author Barbosa, Lidiane Nunes [UNESP]
author_facet Barbosa, Lidiane Nunes [UNESP]
Ferreira, Rui Seabra [UNESP]
Luiza Mello, Priscila [UNESP]
Garcia Garces, Hans [UNESP]
Luana Chechi, Jéssica [UNESP]
Frachin, Tarsila [UNESP]
De Barros, Luciana Curtolo [UNESP]
De Moraes Guimenes Bosco, Sandra [UNESP]
Bagagli, Eduardo [UNESP]
Fernandes Júnior, Ary [UNESP]
Barraviera, Benedito [UNESP]
Delazari Dos Santos, Lucilene [UNESP]
author_role author
author2 Ferreira, Rui Seabra [UNESP]
Luiza Mello, Priscila [UNESP]
Garcia Garces, Hans [UNESP]
Luana Chechi, Jéssica [UNESP]
Frachin, Tarsila [UNESP]
De Barros, Luciana Curtolo [UNESP]
De Moraes Guimenes Bosco, Sandra [UNESP]
Bagagli, Eduardo [UNESP]
Fernandes Júnior, Ary [UNESP]
Barraviera, Benedito [UNESP]
Delazari Dos Santos, Lucilene [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Barbosa, Lidiane Nunes [UNESP]
Ferreira, Rui Seabra [UNESP]
Luiza Mello, Priscila [UNESP]
Garcia Garces, Hans [UNESP]
Luana Chechi, Jéssica [UNESP]
Frachin, Tarsila [UNESP]
De Barros, Luciana Curtolo [UNESP]
De Moraes Guimenes Bosco, Sandra [UNESP]
Bagagli, Eduardo [UNESP]
Fernandes Júnior, Ary [UNESP]
Barraviera, Benedito [UNESP]
Delazari Dos Santos, Lucilene [UNESP]
description Bothrops insularis, known as the golden lancehead snake, has its natural habitat restricted to Queimada Grande Island on the southern coast of Brazil. This culture-dependent study aimed to identify microorganisms obtained from the mouth, eyes, and cloaca of this species. Swabs from 20 snakes were collected for fungal and bacterial isolation. DNA was extracted from all samples, and identification was performed by amplifying the ITS1-5.8S-ITS2 regions and the 16S rDNA gene, respectively. All strains were identified and deposited in the GenBank nucleotide database. MEGA v6.0 software was utilized to construct phylogenetic trees. In total, 100 strains were isolated and characterized, from which 42 fungi were distributed into 23 species and 58 bacteria into 13 species. The genus Fusarium was predominant since 11 strains and probably a new species was isolated from this fungus. Pseudomonas aeruginosa and Enterococcus faecalis were the predominant groups of aerobic bacteria isolated. Phylogenetic analyses between bacterial and fungal sequences suggest a similarity between the microorganisms found on the island and on the continent. These findings may be attributed to anthropic actions resulting from both expeditions to the island and actions of migratory birds, which are the main sources of food for snakes.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-11T17:17:29Z
2018-12-11T17:17:29Z
2018-03-19
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/15287394.2017.1395581
Journal of Toxicology and Environmental Health - Part A: Current Issues, v. 81, n. 6, p. 142-153, 2018.
1087-2620
1528-7394
http://hdl.handle.net/11449/175785
10.1080/15287394.2017.1395581
2-s2.0-85041006586
2-s2.0-85041006586.pdf
3320327570429539
0000-0002-8003-4109
url http://dx.doi.org/10.1080/15287394.2017.1395581
http://hdl.handle.net/11449/175785
identifier_str_mv Journal of Toxicology and Environmental Health - Part A: Current Issues, v. 81, n. 6, p. 142-153, 2018.
1087-2620
1528-7394
10.1080/15287394.2017.1395581
2-s2.0-85041006586
2-s2.0-85041006586.pdf
3320327570429539
0000-0002-8003-4109
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Toxicology and Environmental Health - Part A: Current Issues
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dc.format.none.fl_str_mv 142-153
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
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instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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