Genus Paracoccidioides: Species Recognition and Biogeographic Aspects

Detalhes bibliográficos
Autor(a) principal: Theodoro, Raquel Cordeiro [UNESP]
Data de Publicação: 2012
Outros Autores: Teixeira, Marcus de Melo, Soares Felipe, Maria Sueli, dos Santos Paduan, Karina [UNESP], Ribolla, Paulo Martins [UNESP], San-Blas, Gioconda, Bagagli, Eduardo [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1371/journal.pone.0037694
http://hdl.handle.net/11449/18741
Resumo: Background: Paracoccidioidomycosis is a systemic mycosis caused by Paracoccidioides brasiliensis (species S1, PS2, PS3), and Paracoccidioides lutzii. This work aimed to differentiate species within the genus Paracoccidioides, without applying multilocus sequencing, as well as to obtain knowledge of the possible speciation processes.Methodology/Principal Findings: Single nucleotide polymorphism analysis on GP43, ARF and PRP8 intein genes successfully distinguished isolates into four different species. Morphological evaluation indicated that elongated conidia were observed exclusively in P. lutzii isolates, while all other species (S1, PS2 and PS3) were indistinguishable. To evaluate the biogeographic events that led to the current geographic distribution of Paracoccidioides species and their sister species, Nested Clade and Likelihood Analysis of Geographic Range Evolution (LAGRANGE) analyses were applied. The radiation of Paracoccidioides started in northwest South America, around 11-32 million years ago, as calculated on the basis of ARF substitution rate, in the BEAST program. Vicariance was responsible for the divergence among S1, PS2 and P. lutzii and a recent dispersal generated the PS3 species, restricted to Colombia. Taking into account the ancestral areas revealed by the LAGRANGE analysis and the major geographic distribution of L. loboi in the Amazon basin, a region strongly affected by the Andes uplift and marine incursions in the Cenozoic era, we also speculate about the effect of these geological events on the vicariance between Paracoccidioides and L. loboi.Conclusions/Significance: The use of at least 3 SNPs, but not morphological criteria, as markers allows us to distinguish among the four cryptic species of the genus Paracoccidioides. The work also presents a biogeographic study speculating on how these species might have diverged in South America, thus contributing to elucidating evolutionary aspects of the genus Paracoccidioides.
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spelling Genus Paracoccidioides: Species Recognition and Biogeographic AspectsBackground: Paracoccidioidomycosis is a systemic mycosis caused by Paracoccidioides brasiliensis (species S1, PS2, PS3), and Paracoccidioides lutzii. This work aimed to differentiate species within the genus Paracoccidioides, without applying multilocus sequencing, as well as to obtain knowledge of the possible speciation processes.Methodology/Principal Findings: Single nucleotide polymorphism analysis on GP43, ARF and PRP8 intein genes successfully distinguished isolates into four different species. Morphological evaluation indicated that elongated conidia were observed exclusively in P. lutzii isolates, while all other species (S1, PS2 and PS3) were indistinguishable. To evaluate the biogeographic events that led to the current geographic distribution of Paracoccidioides species and their sister species, Nested Clade and Likelihood Analysis of Geographic Range Evolution (LAGRANGE) analyses were applied. The radiation of Paracoccidioides started in northwest South America, around 11-32 million years ago, as calculated on the basis of ARF substitution rate, in the BEAST program. Vicariance was responsible for the divergence among S1, PS2 and P. lutzii and a recent dispersal generated the PS3 species, restricted to Colombia. Taking into account the ancestral areas revealed by the LAGRANGE analysis and the major geographic distribution of L. loboi in the Amazon basin, a region strongly affected by the Andes uplift and marine incursions in the Cenozoic era, we also speculate about the effect of these geological events on the vicariance between Paracoccidioides and L. loboi.Conclusions/Significance: The use of at least 3 SNPs, but not morphological criteria, as markers allows us to distinguish among the four cryptic species of the genus Paracoccidioides. The work also presents a biogeographic study speculating on how these species might have diverged in South America, thus contributing to elucidating evolutionary aspects of the genus Paracoccidioides.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Estadual Paulista, São Paulo, BrazilUniv Brasilia UNB, Brasilia, DF, BrazilCtr Microbiol & Cell Biol, Venezuelan Inst Sci Res, Caracas, VenezuelaUniv Estadual Paulista, São Paulo, BrazilFAPESP: 07/01306-5FAPESP: 10/08839-1FAPESP: 10/08829-6Public Library ScienceUniversidade Estadual Paulista (Unesp)Universidade de Brasília (UnB)Ctr Microbiol & Cell BiolTheodoro, Raquel Cordeiro [UNESP]Teixeira, Marcus de MeloSoares Felipe, Maria Suelidos Santos Paduan, Karina [UNESP]Ribolla, Paulo Martins [UNESP]San-Blas, GiocondaBagagli, Eduardo [UNESP]2014-05-20T13:52:28Z2014-05-20T13:52:28Z2012-05-30info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article15application/pdfhttp://dx.doi.org/10.1371/journal.pone.0037694Plos One. San Francisco: Public Library Science, v. 7, n. 5, p. 15, 2012.1932-6203http://hdl.handle.net/11449/1874110.1371/journal.pone.0037694WOS:000305353400041WOS000305353400041.pdf332032757042953935771497484568800000-0001-8735-60900000-0002-8003-4109Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLOS ONE2.7661,164info:eu-repo/semantics/openAccess2023-11-02T06:07:13Zoai:repositorio.unesp.br:11449/18741Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-02T06:07:13Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
title Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
spellingShingle Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
Theodoro, Raquel Cordeiro [UNESP]
title_short Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
title_full Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
title_fullStr Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
title_full_unstemmed Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
title_sort Genus Paracoccidioides: Species Recognition and Biogeographic Aspects
author Theodoro, Raquel Cordeiro [UNESP]
author_facet Theodoro, Raquel Cordeiro [UNESP]
Teixeira, Marcus de Melo
Soares Felipe, Maria Sueli
dos Santos Paduan, Karina [UNESP]
Ribolla, Paulo Martins [UNESP]
San-Blas, Gioconda
Bagagli, Eduardo [UNESP]
author_role author
author2 Teixeira, Marcus de Melo
Soares Felipe, Maria Sueli
dos Santos Paduan, Karina [UNESP]
Ribolla, Paulo Martins [UNESP]
San-Blas, Gioconda
Bagagli, Eduardo [UNESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade de Brasília (UnB)
Ctr Microbiol & Cell Biol
dc.contributor.author.fl_str_mv Theodoro, Raquel Cordeiro [UNESP]
Teixeira, Marcus de Melo
Soares Felipe, Maria Sueli
dos Santos Paduan, Karina [UNESP]
Ribolla, Paulo Martins [UNESP]
San-Blas, Gioconda
Bagagli, Eduardo [UNESP]
description Background: Paracoccidioidomycosis is a systemic mycosis caused by Paracoccidioides brasiliensis (species S1, PS2, PS3), and Paracoccidioides lutzii. This work aimed to differentiate species within the genus Paracoccidioides, without applying multilocus sequencing, as well as to obtain knowledge of the possible speciation processes.Methodology/Principal Findings: Single nucleotide polymorphism analysis on GP43, ARF and PRP8 intein genes successfully distinguished isolates into four different species. Morphological evaluation indicated that elongated conidia were observed exclusively in P. lutzii isolates, while all other species (S1, PS2 and PS3) were indistinguishable. To evaluate the biogeographic events that led to the current geographic distribution of Paracoccidioides species and their sister species, Nested Clade and Likelihood Analysis of Geographic Range Evolution (LAGRANGE) analyses were applied. The radiation of Paracoccidioides started in northwest South America, around 11-32 million years ago, as calculated on the basis of ARF substitution rate, in the BEAST program. Vicariance was responsible for the divergence among S1, PS2 and P. lutzii and a recent dispersal generated the PS3 species, restricted to Colombia. Taking into account the ancestral areas revealed by the LAGRANGE analysis and the major geographic distribution of L. loboi in the Amazon basin, a region strongly affected by the Andes uplift and marine incursions in the Cenozoic era, we also speculate about the effect of these geological events on the vicariance between Paracoccidioides and L. loboi.Conclusions/Significance: The use of at least 3 SNPs, but not morphological criteria, as markers allows us to distinguish among the four cryptic species of the genus Paracoccidioides. The work also presents a biogeographic study speculating on how these species might have diverged in South America, thus contributing to elucidating evolutionary aspects of the genus Paracoccidioides.
publishDate 2012
dc.date.none.fl_str_mv 2012-05-30
2014-05-20T13:52:28Z
2014-05-20T13:52:28Z
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format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pone.0037694
Plos One. San Francisco: Public Library Science, v. 7, n. 5, p. 15, 2012.
1932-6203
http://hdl.handle.net/11449/18741
10.1371/journal.pone.0037694
WOS:000305353400041
WOS000305353400041.pdf
3320327570429539
3577149748456880
0000-0001-8735-6090
0000-0002-8003-4109
url http://dx.doi.org/10.1371/journal.pone.0037694
http://hdl.handle.net/11449/18741
identifier_str_mv Plos One. San Francisco: Public Library Science, v. 7, n. 5, p. 15, 2012.
1932-6203
10.1371/journal.pone.0037694
WOS:000305353400041
WOS000305353400041.pdf
3320327570429539
3577149748456880
0000-0001-8735-6090
0000-0002-8003-4109
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