The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework

Detalhes bibliográficos
Autor(a) principal: Prieto, L.
Data de Publicação: 2011
Outros Autores: Zimmermann, B., Goios, A., Rodriguez-Monge, A., Paneto, G. G. [UNESP], Alves, C., Alonso, A., Chin, Chung Man [UNESP], Cardoso, S., Lima, G., Anjos, M. J., Whittle, M. R., Montesino, M., Cicarelli, Regina Maria Barretto [UNESP], Rocha, A. M., Albarran, C., de Pancorbo, M. M., Pinheiro, M. F., Carvalho, M., Sumita, D. R., Parson, W.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.fsigen.2010.10.013
http://hdl.handle.net/11449/42543
Resumo: Mitochondrial DNA (mtDNA) population data for forensic purposes are still scarce for some populations, which may limit the evaluation of forensic evidence especially when the rarity of a haplotype needs to be determined in a database search. In order to improve the collection of mtDNA lineages from the Iberian and South American subcontinents, we here report the results of a collaborative study involving nine laboratories from the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) and EMPOP. The individual laboratories contributed population data that were generated throughout the past 10 years, but in the majority of cases have not been made available to the scientific community. A total of 1019 haplotypes from Iberia (Basque Country, 2 general Spanish populations, 2 North and 1 Central Portugal populations), and Latin America (3 populations from São Paulo) were collected, reviewed and harmonized according to defined EMPOP criteria. The majority of data ambiguities that were found during the reviewing process (41 in total) were transcription errors confirming that the documentation process is still the most error-prone stage in reporting mtDNA population data, especially when performed manually. This GHEP-EMPOP collaboration has significantly improved the quality of the individual mtDNA datasets and adds mtDNA population data as valuable resource to the EMPOP database (www.empop.org). (C) 2010 Elsevier B.V. All rights reserved.
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spelling The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic caseworkmtDNAMitochondrial DNAGHEP-ISFGEMPOPPopulation analysesForensic scienceMitochondrial DNA (mtDNA) population data for forensic purposes are still scarce for some populations, which may limit the evaluation of forensic evidence especially when the rarity of a haplotype needs to be determined in a database search. In order to improve the collection of mtDNA lineages from the Iberian and South American subcontinents, we here report the results of a collaborative study involving nine laboratories from the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) and EMPOP. The individual laboratories contributed population data that were generated throughout the past 10 years, but in the majority of cases have not been made available to the scientific community. A total of 1019 haplotypes from Iberia (Basque Country, 2 general Spanish populations, 2 North and 1 Central Portugal populations), and Latin America (3 populations from São Paulo) were collected, reviewed and harmonized according to defined EMPOP criteria. The majority of data ambiguities that were found during the reviewing process (41 in total) were transcription errors confirming that the documentation process is still the most error-prone stage in reporting mtDNA population data, especially when performed manually. This GHEP-EMPOP collaboration has significantly improved the quality of the individual mtDNA datasets and adds mtDNA population data as valuable resource to the EMPOP database (www.empop.org). (C) 2010 Elsevier B.V. All rights reserved.Innsbruck Med Univ, Inst Legal Med, Innsbruck, AustriaUniv Inst Res Forens Sci IUICP, Madrid, SpainUniv Porto IPATIMUP, Inst Mol Pathol & Immunol, Oporto, PortugalUniv Estadual Paulista, UNESP, Lab Patern, São Paulo, BrazilNatl Inst Toxicol & Forens Sci INTCF, Madrid, SpainUniv São Paulo, Sch Med, Dept Legal Med Bioeth & Occupat Hlth, BR-05508 São Paulo, BrazilUniv Basque Country, BIOMICs Res Grp, Ctr Invest & Estudios Avanzados Lucio Lascaray, Vitoria, SpainNatl Inst Legal Med, N Branch, Oporto, PortugalNatl Inst Legal Med, Ctr Branch, Coimbra, PortugalGenom Engn Mol, São Paulo, BrazilUniv Estadual Paulista, UNESP, Lab Patern, São Paulo, BrazilElsevier B.V.Innsbruck Med UnivUniv Inst Res Forens Sci IUICPUniv Porto IPATIMUPUniversidade Estadual Paulista (Unesp)Natl Inst Toxicol & Forens Sci INTCFUniversidade de São Paulo (USP)Univ Basque CountryNatl Inst Legal MedGenom Engn MolPrieto, L.Zimmermann, B.Goios, A.Rodriguez-Monge, A.Paneto, G. G. [UNESP]Alves, C.Alonso, A.Chin, Chung Man [UNESP]Cardoso, S.Lima, G.Anjos, M. J.Whittle, M. R.Montesino, M.Cicarelli, Regina Maria Barretto [UNESP]Rocha, A. M.Albarran, C.de Pancorbo, M. M.Pinheiro, M. F.Carvalho, M.Sumita, D. R.Parson, W.2014-05-20T15:34:26Z2014-05-20T15:34:26Z2011-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article146-151application/pdfhttp://dx.doi.org/10.1016/j.fsigen.2010.10.013Forensic Science International-genetics. Clare: Elsevier B.V., v. 5, n. 2, p. 146-151, 2011.1872-4973http://hdl.handle.net/11449/4254310.1016/j.fsigen.2010.10.013WOS:000288248400016WOS000288248400016.pdf97343336079754130000-0003-4141-0455Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengForensic Science International: Genetics5.6371,644info:eu-repo/semantics/openAccess2023-11-07T06:08:22Zoai:repositorio.unesp.br:11449/42543Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-07T06:08:22Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
title The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
spellingShingle The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
Prieto, L.
mtDNA
Mitochondrial DNA
GHEP-ISFG
EMPOP
Population analyses
Forensic science
title_short The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
title_full The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
title_fullStr The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
title_full_unstemmed The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
title_sort The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
author Prieto, L.
author_facet Prieto, L.
Zimmermann, B.
Goios, A.
Rodriguez-Monge, A.
Paneto, G. G. [UNESP]
Alves, C.
Alonso, A.
Chin, Chung Man [UNESP]
Cardoso, S.
Lima, G.
Anjos, M. J.
Whittle, M. R.
Montesino, M.
Cicarelli, Regina Maria Barretto [UNESP]
Rocha, A. M.
Albarran, C.
de Pancorbo, M. M.
Pinheiro, M. F.
Carvalho, M.
Sumita, D. R.
Parson, W.
author_role author
author2 Zimmermann, B.
Goios, A.
Rodriguez-Monge, A.
Paneto, G. G. [UNESP]
Alves, C.
Alonso, A.
Chin, Chung Man [UNESP]
Cardoso, S.
Lima, G.
Anjos, M. J.
Whittle, M. R.
Montesino, M.
Cicarelli, Regina Maria Barretto [UNESP]
Rocha, A. M.
Albarran, C.
de Pancorbo, M. M.
Pinheiro, M. F.
Carvalho, M.
Sumita, D. R.
Parson, W.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Innsbruck Med Univ
Univ Inst Res Forens Sci IUICP
Univ Porto IPATIMUP
Universidade Estadual Paulista (Unesp)
Natl Inst Toxicol & Forens Sci INTCF
Universidade de São Paulo (USP)
Univ Basque Country
Natl Inst Legal Med
Genom Engn Mol
dc.contributor.author.fl_str_mv Prieto, L.
Zimmermann, B.
Goios, A.
Rodriguez-Monge, A.
Paneto, G. G. [UNESP]
Alves, C.
Alonso, A.
Chin, Chung Man [UNESP]
Cardoso, S.
Lima, G.
Anjos, M. J.
Whittle, M. R.
Montesino, M.
Cicarelli, Regina Maria Barretto [UNESP]
Rocha, A. M.
Albarran, C.
de Pancorbo, M. M.
Pinheiro, M. F.
Carvalho, M.
Sumita, D. R.
Parson, W.
dc.subject.por.fl_str_mv mtDNA
Mitochondrial DNA
GHEP-ISFG
EMPOP
Population analyses
Forensic science
topic mtDNA
Mitochondrial DNA
GHEP-ISFG
EMPOP
Population analyses
Forensic science
description Mitochondrial DNA (mtDNA) population data for forensic purposes are still scarce for some populations, which may limit the evaluation of forensic evidence especially when the rarity of a haplotype needs to be determined in a database search. In order to improve the collection of mtDNA lineages from the Iberian and South American subcontinents, we here report the results of a collaborative study involving nine laboratories from the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) and EMPOP. The individual laboratories contributed population data that were generated throughout the past 10 years, but in the majority of cases have not been made available to the scientific community. A total of 1019 haplotypes from Iberia (Basque Country, 2 general Spanish populations, 2 North and 1 Central Portugal populations), and Latin America (3 populations from São Paulo) were collected, reviewed and harmonized according to defined EMPOP criteria. The majority of data ambiguities that were found during the reviewing process (41 in total) were transcription errors confirming that the documentation process is still the most error-prone stage in reporting mtDNA population data, especially when performed manually. This GHEP-EMPOP collaboration has significantly improved the quality of the individual mtDNA datasets and adds mtDNA population data as valuable resource to the EMPOP database (www.empop.org). (C) 2010 Elsevier B.V. All rights reserved.
publishDate 2011
dc.date.none.fl_str_mv 2011-03-01
2014-05-20T15:34:26Z
2014-05-20T15:34:26Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.fsigen.2010.10.013
Forensic Science International-genetics. Clare: Elsevier B.V., v. 5, n. 2, p. 146-151, 2011.
1872-4973
http://hdl.handle.net/11449/42543
10.1016/j.fsigen.2010.10.013
WOS:000288248400016
WOS000288248400016.pdf
9734333607975413
0000-0003-4141-0455
url http://dx.doi.org/10.1016/j.fsigen.2010.10.013
http://hdl.handle.net/11449/42543
identifier_str_mv Forensic Science International-genetics. Clare: Elsevier B.V., v. 5, n. 2, p. 146-151, 2011.
1872-4973
10.1016/j.fsigen.2010.10.013
WOS:000288248400016
WOS000288248400016.pdf
9734333607975413
0000-0003-4141-0455
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Forensic Science International: Genetics
5.637
1,644
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 146-151
application/pdf
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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