The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.fsigen.2010.10.013 http://hdl.handle.net/11449/42543 |
Resumo: | Mitochondrial DNA (mtDNA) population data for forensic purposes are still scarce for some populations, which may limit the evaluation of forensic evidence especially when the rarity of a haplotype needs to be determined in a database search. In order to improve the collection of mtDNA lineages from the Iberian and South American subcontinents, we here report the results of a collaborative study involving nine laboratories from the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) and EMPOP. The individual laboratories contributed population data that were generated throughout the past 10 years, but in the majority of cases have not been made available to the scientific community. A total of 1019 haplotypes from Iberia (Basque Country, 2 general Spanish populations, 2 North and 1 Central Portugal populations), and Latin America (3 populations from São Paulo) were collected, reviewed and harmonized according to defined EMPOP criteria. The majority of data ambiguities that were found during the reviewing process (41 in total) were transcription errors confirming that the documentation process is still the most error-prone stage in reporting mtDNA population data, especially when performed manually. This GHEP-EMPOP collaboration has significantly improved the quality of the individual mtDNA datasets and adds mtDNA population data as valuable resource to the EMPOP database (www.empop.org). (C) 2010 Elsevier B.V. All rights reserved. |
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The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic caseworkmtDNAMitochondrial DNAGHEP-ISFGEMPOPPopulation analysesForensic scienceMitochondrial DNA (mtDNA) population data for forensic purposes are still scarce for some populations, which may limit the evaluation of forensic evidence especially when the rarity of a haplotype needs to be determined in a database search. In order to improve the collection of mtDNA lineages from the Iberian and South American subcontinents, we here report the results of a collaborative study involving nine laboratories from the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) and EMPOP. The individual laboratories contributed population data that were generated throughout the past 10 years, but in the majority of cases have not been made available to the scientific community. A total of 1019 haplotypes from Iberia (Basque Country, 2 general Spanish populations, 2 North and 1 Central Portugal populations), and Latin America (3 populations from São Paulo) were collected, reviewed and harmonized according to defined EMPOP criteria. The majority of data ambiguities that were found during the reviewing process (41 in total) were transcription errors confirming that the documentation process is still the most error-prone stage in reporting mtDNA population data, especially when performed manually. This GHEP-EMPOP collaboration has significantly improved the quality of the individual mtDNA datasets and adds mtDNA population data as valuable resource to the EMPOP database (www.empop.org). (C) 2010 Elsevier B.V. All rights reserved.Innsbruck Med Univ, Inst Legal Med, Innsbruck, AustriaUniv Inst Res Forens Sci IUICP, Madrid, SpainUniv Porto IPATIMUP, Inst Mol Pathol & Immunol, Oporto, PortugalUniv Estadual Paulista, UNESP, Lab Patern, São Paulo, BrazilNatl Inst Toxicol & Forens Sci INTCF, Madrid, SpainUniv São Paulo, Sch Med, Dept Legal Med Bioeth & Occupat Hlth, BR-05508 São Paulo, BrazilUniv Basque Country, BIOMICs Res Grp, Ctr Invest & Estudios Avanzados Lucio Lascaray, Vitoria, SpainNatl Inst Legal Med, N Branch, Oporto, PortugalNatl Inst Legal Med, Ctr Branch, Coimbra, PortugalGenom Engn Mol, São Paulo, BrazilUniv Estadual Paulista, UNESP, Lab Patern, São Paulo, BrazilElsevier B.V.Innsbruck Med UnivUniv Inst Res Forens Sci IUICPUniv Porto IPATIMUPUniversidade Estadual Paulista (Unesp)Natl Inst Toxicol & Forens Sci INTCFUniversidade de São Paulo (USP)Univ Basque CountryNatl Inst Legal MedGenom Engn MolPrieto, L.Zimmermann, B.Goios, A.Rodriguez-Monge, A.Paneto, G. G. [UNESP]Alves, C.Alonso, A.Chin, Chung Man [UNESP]Cardoso, S.Lima, G.Anjos, M. J.Whittle, M. R.Montesino, M.Cicarelli, Regina Maria Barretto [UNESP]Rocha, A. M.Albarran, C.de Pancorbo, M. M.Pinheiro, M. F.Carvalho, M.Sumita, D. R.Parson, W.2014-05-20T15:34:26Z2014-05-20T15:34:26Z2011-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article146-151application/pdfhttp://dx.doi.org/10.1016/j.fsigen.2010.10.013Forensic Science International-genetics. Clare: Elsevier B.V., v. 5, n. 2, p. 146-151, 2011.1872-4973http://hdl.handle.net/11449/4254310.1016/j.fsigen.2010.10.013WOS:000288248400016WOS000288248400016.pdf97343336079754130000-0003-4141-0455Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengForensic Science International: Genetics5.6371,644info:eu-repo/semantics/openAccess2024-06-24T13:07:27Zoai:repositorio.unesp.br:11449/42543Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T17:03:49.626653Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
title |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
spellingShingle |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework Prieto, L. mtDNA Mitochondrial DNA GHEP-ISFG EMPOP Population analyses Forensic science |
title_short |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
title_full |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
title_fullStr |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
title_full_unstemmed |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
title_sort |
The GHEP-EMPOP collaboration on mtDNA population data-A new resource for forensic casework |
author |
Prieto, L. |
author_facet |
Prieto, L. Zimmermann, B. Goios, A. Rodriguez-Monge, A. Paneto, G. G. [UNESP] Alves, C. Alonso, A. Chin, Chung Man [UNESP] Cardoso, S. Lima, G. Anjos, M. J. Whittle, M. R. Montesino, M. Cicarelli, Regina Maria Barretto [UNESP] Rocha, A. M. Albarran, C. de Pancorbo, M. M. Pinheiro, M. F. Carvalho, M. Sumita, D. R. Parson, W. |
author_role |
author |
author2 |
Zimmermann, B. Goios, A. Rodriguez-Monge, A. Paneto, G. G. [UNESP] Alves, C. Alonso, A. Chin, Chung Man [UNESP] Cardoso, S. Lima, G. Anjos, M. J. Whittle, M. R. Montesino, M. Cicarelli, Regina Maria Barretto [UNESP] Rocha, A. M. Albarran, C. de Pancorbo, M. M. Pinheiro, M. F. Carvalho, M. Sumita, D. R. Parson, W. |
author2_role |
author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Innsbruck Med Univ Univ Inst Res Forens Sci IUICP Univ Porto IPATIMUP Universidade Estadual Paulista (Unesp) Natl Inst Toxicol & Forens Sci INTCF Universidade de São Paulo (USP) Univ Basque Country Natl Inst Legal Med Genom Engn Mol |
dc.contributor.author.fl_str_mv |
Prieto, L. Zimmermann, B. Goios, A. Rodriguez-Monge, A. Paneto, G. G. [UNESP] Alves, C. Alonso, A. Chin, Chung Man [UNESP] Cardoso, S. Lima, G. Anjos, M. J. Whittle, M. R. Montesino, M. Cicarelli, Regina Maria Barretto [UNESP] Rocha, A. M. Albarran, C. de Pancorbo, M. M. Pinheiro, M. F. Carvalho, M. Sumita, D. R. Parson, W. |
dc.subject.por.fl_str_mv |
mtDNA Mitochondrial DNA GHEP-ISFG EMPOP Population analyses Forensic science |
topic |
mtDNA Mitochondrial DNA GHEP-ISFG EMPOP Population analyses Forensic science |
description |
Mitochondrial DNA (mtDNA) population data for forensic purposes are still scarce for some populations, which may limit the evaluation of forensic evidence especially when the rarity of a haplotype needs to be determined in a database search. In order to improve the collection of mtDNA lineages from the Iberian and South American subcontinents, we here report the results of a collaborative study involving nine laboratories from the Spanish and Portuguese Speaking Working Group of the International Society for Forensic Genetics (GHEP-ISFG) and EMPOP. The individual laboratories contributed population data that were generated throughout the past 10 years, but in the majority of cases have not been made available to the scientific community. A total of 1019 haplotypes from Iberia (Basque Country, 2 general Spanish populations, 2 North and 1 Central Portugal populations), and Latin America (3 populations from São Paulo) were collected, reviewed and harmonized according to defined EMPOP criteria. The majority of data ambiguities that were found during the reviewing process (41 in total) were transcription errors confirming that the documentation process is still the most error-prone stage in reporting mtDNA population data, especially when performed manually. This GHEP-EMPOP collaboration has significantly improved the quality of the individual mtDNA datasets and adds mtDNA population data as valuable resource to the EMPOP database (www.empop.org). (C) 2010 Elsevier B.V. All rights reserved. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-03-01 2014-05-20T15:34:26Z 2014-05-20T15:34:26Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.fsigen.2010.10.013 Forensic Science International-genetics. Clare: Elsevier B.V., v. 5, n. 2, p. 146-151, 2011. 1872-4973 http://hdl.handle.net/11449/42543 10.1016/j.fsigen.2010.10.013 WOS:000288248400016 WOS000288248400016.pdf 9734333607975413 0000-0003-4141-0455 |
url |
http://dx.doi.org/10.1016/j.fsigen.2010.10.013 http://hdl.handle.net/11449/42543 |
identifier_str_mv |
Forensic Science International-genetics. Clare: Elsevier B.V., v. 5, n. 2, p. 146-151, 2011. 1872-4973 10.1016/j.fsigen.2010.10.013 WOS:000288248400016 WOS000288248400016.pdf 9734333607975413 0000-0003-4141-0455 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Forensic Science International: Genetics 5.637 1,644 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
146-151 application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128749444530176 |