Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
Autor(a) principal: | |
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Data de Publicação: | 2003 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1094/PHYTO.2003.93.5.610 http://hdl.handle.net/11449/67272 |
Resumo: | The relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations. |
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Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilitiesMigrant genotypesPopulation geneticsThanatephorus cucumerisRhizoctoniaSolanum tuberosumThe relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations.Department of Plant Pathology North Carolina State University, Raleigh, NC 27695Department of Biology Duke University, Durham, NC 27708U.S. Dept. Agric.-Agric. Res. Serv. Cereal Disease Laboratory University of Minnesota, St. Paul, MN 55108Departamento de Biologia Faculdade de Engenharia Univ. Estadual Paulista Julio M., 15385-000 Ilha Solteira, S. PauloNorth Carolina State UniversityDuke UniversityUniversity of MinnesotaUniversidade Estadual Paulista (Unesp)Ceresini, Paulo C. [UNESP]Shew, H. DavidVilgalys, Rytas J.Gale, Liane RosewichCubeta, Marc A.2014-05-27T11:20:39Z2014-05-27T11:20:39Z2003-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article610-615http://dx.doi.org/10.1094/PHYTO.2003.93.5.610Phytopathology, v. 93, n. 5, p. 610-615, 2003.0031-949Xhttp://hdl.handle.net/11449/6727210.1094/PHYTO.2003.93.5.6102-s2.0-0037408493Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPhytopathology3.036info:eu-repo/semantics/openAccess2024-07-05T18:13:25Zoai:repositorio.unesp.br:11449/67272Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:29:59.816914Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
title |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
spellingShingle |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities Ceresini, Paulo C. [UNESP] Migrant genotypes Population genetics Thanatephorus cucumeris Rhizoctonia Solanum tuberosum |
title_short |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
title_full |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
title_fullStr |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
title_full_unstemmed |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
title_sort |
Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities |
author |
Ceresini, Paulo C. [UNESP] |
author_facet |
Ceresini, Paulo C. [UNESP] Shew, H. David Vilgalys, Rytas J. Gale, Liane Rosewich Cubeta, Marc A. |
author_role |
author |
author2 |
Shew, H. David Vilgalys, Rytas J. Gale, Liane Rosewich Cubeta, Marc A. |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
North Carolina State University Duke University University of Minnesota Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Ceresini, Paulo C. [UNESP] Shew, H. David Vilgalys, Rytas J. Gale, Liane Rosewich Cubeta, Marc A. |
dc.subject.por.fl_str_mv |
Migrant genotypes Population genetics Thanatephorus cucumeris Rhizoctonia Solanum tuberosum |
topic |
Migrant genotypes Population genetics Thanatephorus cucumeris Rhizoctonia Solanum tuberosum |
description |
The relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations. |
publishDate |
2003 |
dc.date.none.fl_str_mv |
2003-05-01 2014-05-27T11:20:39Z 2014-05-27T11:20:39Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1094/PHYTO.2003.93.5.610 Phytopathology, v. 93, n. 5, p. 610-615, 2003. 0031-949X http://hdl.handle.net/11449/67272 10.1094/PHYTO.2003.93.5.610 2-s2.0-0037408493 |
url |
http://dx.doi.org/10.1094/PHYTO.2003.93.5.610 http://hdl.handle.net/11449/67272 |
identifier_str_mv |
Phytopathology, v. 93, n. 5, p. 610-615, 2003. 0031-949X 10.1094/PHYTO.2003.93.5.610 2-s2.0-0037408493 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Phytopathology 3.036 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
610-615 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129077721169920 |