Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities

Detalhes bibliográficos
Autor(a) principal: Ceresini, Paulo C. [UNESP]
Data de Publicação: 2003
Outros Autores: Shew, H. David, Vilgalys, Rytas J., Gale, Liane Rosewich, Cubeta, Marc A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1094/PHYTO.2003.93.5.610
http://hdl.handle.net/11449/67272
Resumo: The relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations.
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spelling Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilitiesMigrant genotypesPopulation geneticsThanatephorus cucumerisRhizoctoniaSolanum tuberosumThe relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations.Department of Plant Pathology North Carolina State University, Raleigh, NC 27695Department of Biology Duke University, Durham, NC 27708U.S. Dept. Agric.-Agric. Res. Serv. Cereal Disease Laboratory University of Minnesota, St. Paul, MN 55108Departamento de Biologia Faculdade de Engenharia Univ. Estadual Paulista Julio M., 15385-000 Ilha Solteira, S. PauloNorth Carolina State UniversityDuke UniversityUniversity of MinnesotaUniversidade Estadual Paulista (Unesp)Ceresini, Paulo C. [UNESP]Shew, H. DavidVilgalys, Rytas J.Gale, Liane RosewichCubeta, Marc A.2014-05-27T11:20:39Z2014-05-27T11:20:39Z2003-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article610-615http://dx.doi.org/10.1094/PHYTO.2003.93.5.610Phytopathology, v. 93, n. 5, p. 610-615, 2003.0031-949Xhttp://hdl.handle.net/11449/6727210.1094/PHYTO.2003.93.5.6102-s2.0-0037408493Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPhytopathology3.036info:eu-repo/semantics/openAccess2024-07-05T18:13:25Zoai:repositorio.unesp.br:11449/67272Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:29:59.816914Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
title Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
spellingShingle Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
Ceresini, Paulo C. [UNESP]
Migrant genotypes
Population genetics
Thanatephorus cucumeris
Rhizoctonia
Solanum tuberosum
title_short Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
title_full Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
title_fullStr Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
title_full_unstemmed Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
title_sort Detecting migrants in populations of Rhizoctonia solani anastomosis group 3 from potato in North Carolina using multilocus genotype probabilities
author Ceresini, Paulo C. [UNESP]
author_facet Ceresini, Paulo C. [UNESP]
Shew, H. David
Vilgalys, Rytas J.
Gale, Liane Rosewich
Cubeta, Marc A.
author_role author
author2 Shew, H. David
Vilgalys, Rytas J.
Gale, Liane Rosewich
Cubeta, Marc A.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv North Carolina State University
Duke University
University of Minnesota
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Ceresini, Paulo C. [UNESP]
Shew, H. David
Vilgalys, Rytas J.
Gale, Liane Rosewich
Cubeta, Marc A.
dc.subject.por.fl_str_mv Migrant genotypes
Population genetics
Thanatephorus cucumeris
Rhizoctonia
Solanum tuberosum
topic Migrant genotypes
Population genetics
Thanatephorus cucumeris
Rhizoctonia
Solanum tuberosum
description The relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations.
publishDate 2003
dc.date.none.fl_str_mv 2003-05-01
2014-05-27T11:20:39Z
2014-05-27T11:20:39Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1094/PHYTO.2003.93.5.610
Phytopathology, v. 93, n. 5, p. 610-615, 2003.
0031-949X
http://hdl.handle.net/11449/67272
10.1094/PHYTO.2003.93.5.610
2-s2.0-0037408493
url http://dx.doi.org/10.1094/PHYTO.2003.93.5.610
http://hdl.handle.net/11449/67272
identifier_str_mv Phytopathology, v. 93, n. 5, p. 610-615, 2003.
0031-949X
10.1094/PHYTO.2003.93.5.610
2-s2.0-0037408493
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Phytopathology
3.036
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 610-615
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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