Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging?
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1590/1678-9199-JVATITD-2020-0011 |
Texto Completo: | http://dx.doi.org/10.1590/1678-9199-JVATITD-2020-0011 http://hdl.handle.net/11449/206624 |
Resumo: | Background: Neuroimaging strategies are essential to locate, to elucidate the etiology, and to the follow up of brain disease patients. Magnetic resonance imaging (MRI) provides good cerebral soft-tissue contrast detection and diagnostic sensitivity. Inflammatory lesions and tumors are common brain diseases that may present a similar pattern of a cerebral ring enhancing lesion on MRI, and non-enhancing core (which may reflect cystic components or necrosis) leading to misdiagnosis. Texture analysis (TA) and machine learning approaches are computer-aided diagnostic tools that can be used to assist radiologists in such decisions. Methods: In this study, we combined texture features with machine learning (ML) methods aiming to differentiate brain tumors from inflammatory lesions in magnetic resonance imaging. Retrospective examination of 67 patients, with a pattern of a cerebral ring enhancing lesion, 30 with inflammatory, and 37 with tumoral lesions were selected. Three different MRI sequences and textural features were extracted using gray level co-occurrence matrix and gray level run length. All diagnoses were confirmed by histopathology, laboratorial analysis or MRI. Results: The features extracted were processed for the application of ML methods that performed the classification. T1-weighted images proved to be the best sequence for classification, in which the differentiation between inflammatory and tumoral lesions presented high accuracy (0.827), area under ROC curve (0.906), precision (0.837), and recall (0.912). Conclusion: The algorithm obtained textures capable of differentiating brain tumors from inflammatory lesions, on T1-weghted images without contrast medium using the Random Forest machine learning classifier. |
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Repositório Institucional da UNESP |
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Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging?Image processingInflammationMagnetic resonance imagingMedical imagingTumorBackground: Neuroimaging strategies are essential to locate, to elucidate the etiology, and to the follow up of brain disease patients. Magnetic resonance imaging (MRI) provides good cerebral soft-tissue contrast detection and diagnostic sensitivity. Inflammatory lesions and tumors are common brain diseases that may present a similar pattern of a cerebral ring enhancing lesion on MRI, and non-enhancing core (which may reflect cystic components or necrosis) leading to misdiagnosis. Texture analysis (TA) and machine learning approaches are computer-aided diagnostic tools that can be used to assist radiologists in such decisions. Methods: In this study, we combined texture features with machine learning (ML) methods aiming to differentiate brain tumors from inflammatory lesions in magnetic resonance imaging. Retrospective examination of 67 patients, with a pattern of a cerebral ring enhancing lesion, 30 with inflammatory, and 37 with tumoral lesions were selected. Three different MRI sequences and textural features were extracted using gray level co-occurrence matrix and gray level run length. All diagnoses were confirmed by histopathology, laboratorial analysis or MRI. Results: The features extracted were processed for the application of ML methods that performed the classification. T1-weighted images proved to be the best sequence for classification, in which the differentiation between inflammatory and tumoral lesions presented high accuracy (0.827), area under ROC curve (0.906), precision (0.837), and recall (0.912). Conclusion: The algorithm obtained textures capable of differentiating brain tumors from inflammatory lesions, on T1-weghted images without contrast medium using the Random Forest machine learning classifier.American Federation for Aging ResearchDepartment of Physics and Biophysics Botucatu Biosciences Institute São Paulo State University (UNESP)Department of Radiology School of Medical Sciences University of Campinas (Unicamp)Department of Tropical Disease and Imaging Diagnosis Botucatu Medical School São Paulo State University (UNESP)Department of Physics and Biophysics Botucatu Biosciences Institute São Paulo State University (UNESP)Department of Tropical Disease and Imaging Diagnosis Botucatu Medical School São Paulo State University (UNESP)Universidade Estadual Paulista (Unesp)Universidade Estadual de Campinas (UNICAMP)Alves, Allan Felipe Fattori [UNESP]de Arruda Miranda, José Ricardo [UNESP]Reis, Fabianode Souza, Sergio Augusto Santana [UNESP]Alves, Luciana Luchesi Rodrigues [UNESP]de Moura Feitoza, Laissonde Souza de Castro, José Thiagode Pina, Diana Rodrigues [UNESP]2021-06-25T10:35:20Z2021-06-25T10:35:20Z2020-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://dx.doi.org/10.1590/1678-9199-JVATITD-2020-0011Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 26.1678-91991678-9180http://hdl.handle.net/11449/20662410.1590/1678-9199-JVATITD-2020-0011S1678-919920200001003282-s2.0-85092231804S1678-91992020000100328.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Venomous Animals and Toxins Including Tropical Diseasesinfo:eu-repo/semantics/openAccess2024-08-15T15:22:47Zoai:repositorio.unesp.br:11449/206624Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-15T15:22:47Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
title |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
spellingShingle |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? Alves, Allan Felipe Fattori [UNESP] Image processing Inflammation Magnetic resonance imaging Medical imaging Tumor Alves, Allan Felipe Fattori [UNESP] Image processing Inflammation Magnetic resonance imaging Medical imaging Tumor |
title_short |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
title_full |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
title_fullStr |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
title_full_unstemmed |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
title_sort |
Inflammatory lesions and brain tumors: Is it possible to differentiate them based on texture features in magnetic resonance imaging? |
author |
Alves, Allan Felipe Fattori [UNESP] |
author_facet |
Alves, Allan Felipe Fattori [UNESP] Alves, Allan Felipe Fattori [UNESP] de Arruda Miranda, José Ricardo [UNESP] Reis, Fabiano de Souza, Sergio Augusto Santana [UNESP] Alves, Luciana Luchesi Rodrigues [UNESP] de Moura Feitoza, Laisson de Souza de Castro, José Thiago de Pina, Diana Rodrigues [UNESP] de Arruda Miranda, José Ricardo [UNESP] Reis, Fabiano de Souza, Sergio Augusto Santana [UNESP] Alves, Luciana Luchesi Rodrigues [UNESP] de Moura Feitoza, Laisson de Souza de Castro, José Thiago de Pina, Diana Rodrigues [UNESP] |
author_role |
author |
author2 |
de Arruda Miranda, José Ricardo [UNESP] Reis, Fabiano de Souza, Sergio Augusto Santana [UNESP] Alves, Luciana Luchesi Rodrigues [UNESP] de Moura Feitoza, Laisson de Souza de Castro, José Thiago de Pina, Diana Rodrigues [UNESP] |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Estadual de Campinas (UNICAMP) |
dc.contributor.author.fl_str_mv |
Alves, Allan Felipe Fattori [UNESP] de Arruda Miranda, José Ricardo [UNESP] Reis, Fabiano de Souza, Sergio Augusto Santana [UNESP] Alves, Luciana Luchesi Rodrigues [UNESP] de Moura Feitoza, Laisson de Souza de Castro, José Thiago de Pina, Diana Rodrigues [UNESP] |
dc.subject.por.fl_str_mv |
Image processing Inflammation Magnetic resonance imaging Medical imaging Tumor |
topic |
Image processing Inflammation Magnetic resonance imaging Medical imaging Tumor |
description |
Background: Neuroimaging strategies are essential to locate, to elucidate the etiology, and to the follow up of brain disease patients. Magnetic resonance imaging (MRI) provides good cerebral soft-tissue contrast detection and diagnostic sensitivity. Inflammatory lesions and tumors are common brain diseases that may present a similar pattern of a cerebral ring enhancing lesion on MRI, and non-enhancing core (which may reflect cystic components or necrosis) leading to misdiagnosis. Texture analysis (TA) and machine learning approaches are computer-aided diagnostic tools that can be used to assist radiologists in such decisions. Methods: In this study, we combined texture features with machine learning (ML) methods aiming to differentiate brain tumors from inflammatory lesions in magnetic resonance imaging. Retrospective examination of 67 patients, with a pattern of a cerebral ring enhancing lesion, 30 with inflammatory, and 37 with tumoral lesions were selected. Three different MRI sequences and textural features were extracted using gray level co-occurrence matrix and gray level run length. All diagnoses were confirmed by histopathology, laboratorial analysis or MRI. Results: The features extracted were processed for the application of ML methods that performed the classification. T1-weighted images proved to be the best sequence for classification, in which the differentiation between inflammatory and tumoral lesions presented high accuracy (0.827), area under ROC curve (0.906), precision (0.837), and recall (0.912). Conclusion: The algorithm obtained textures capable of differentiating brain tumors from inflammatory lesions, on T1-weghted images without contrast medium using the Random Forest machine learning classifier. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-01-01 2021-06-25T10:35:20Z 2021-06-25T10:35:20Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1678-9199-JVATITD-2020-0011 Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 26. 1678-9199 1678-9180 http://hdl.handle.net/11449/206624 10.1590/1678-9199-JVATITD-2020-0011 S1678-91992020000100328 2-s2.0-85092231804 S1678-91992020000100328.pdf |
url |
http://dx.doi.org/10.1590/1678-9199-JVATITD-2020-0011 http://hdl.handle.net/11449/206624 |
identifier_str_mv |
Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 26. 1678-9199 1678-9180 10.1590/1678-9199-JVATITD-2020-0011 S1678-91992020000100328 2-s2.0-85092231804 S1678-91992020000100328.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Venomous Animals and Toxins Including Tropical Diseases |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1822182536434941952 |
dc.identifier.doi.none.fl_str_mv |
10.1590/1678-9199-JVATITD-2020-0011 |