Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae

Detalhes bibliográficos
Autor(a) principal: Silva, T. L.
Data de Publicação: 2022
Outros Autores: Cardoso, V. L. O., Costa, N. R. A., Venancio, L. P. R., Pereira, L. R. [UNESP], Bonini-Domingos, C. R. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.4238/gmr18977
http://hdl.handle.net/11449/237653
Resumo: The Brazilian Testudinidae family is widespread across South America. It includes Chelonoidis denticulatus, the largest tortoise in South America and Chelonoidis carbonarius, found mostly in the north and northwestern part of the continent. Using hemoglobin to identify species is cheaper than other methods such as DNA sequencing and can offer useful information, since the hemoglobin molecule is a well-preserved protein chain during the evolution of species. Thus, in order to establish a hemoglobin profile for the Brazilian Testudinidae C. denticulatus, C. carbonarius and morphotype 1, hemoglobin electrophoresis was performed at acid pH in phosphate agar and at alkaline pH in cellulose acetate, in order to visualize the specific fractions of each species. High performance liquid chromatography was used for the quantification of fractions. For an in-depth analysis and better detailing of the hemoglobin profile of the species, polypeptide chain electrophoresis was performed at acid and alkaline pH. We observed differences in the hemoglobin profiles of C. denticulatus in relation to C. carbonarius and morphotype 1, which suggests that this methodology, not common in taxonomic studies, can help determine relationships between species, since hemoglobins are proteins with well-preserved genes. We found differences in hemoglobin mobility between C. denticulatus, C. carbonarius and morphotype 1 in electrophoresis at alkaline pH, however, the behavior of globin chains was similar between the three groups. High performance liquid chromatography showed different retention times in the globin fractions of C. denticulatus and C. carbonarius, but not between C. carbonarius and morphotype 1, indicating that, possibly, the divergence time between C. carbonarius and morphotype 1 is more recent than the divergence between C. denticulatus and C. carbonarius, due to the highly conserved character of this functional protein. Thus, considering the high degree of conservation of hemoglobins in vertebrates, and the differences observed in electrophoresis at alkaline pH and HPLC, we infer that C. carbonarius and morphotype 1 present a common branch.
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spelling Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian TestudinidaeTestudinidaeHemoglobinElectrophoresisChelonoidisThe Brazilian Testudinidae family is widespread across South America. It includes Chelonoidis denticulatus, the largest tortoise in South America and Chelonoidis carbonarius, found mostly in the north and northwestern part of the continent. Using hemoglobin to identify species is cheaper than other methods such as DNA sequencing and can offer useful information, since the hemoglobin molecule is a well-preserved protein chain during the evolution of species. Thus, in order to establish a hemoglobin profile for the Brazilian Testudinidae C. denticulatus, C. carbonarius and morphotype 1, hemoglobin electrophoresis was performed at acid pH in phosphate agar and at alkaline pH in cellulose acetate, in order to visualize the specific fractions of each species. High performance liquid chromatography was used for the quantification of fractions. For an in-depth analysis and better detailing of the hemoglobin profile of the species, polypeptide chain electrophoresis was performed at acid and alkaline pH. We observed differences in the hemoglobin profiles of C. denticulatus in relation to C. carbonarius and morphotype 1, which suggests that this methodology, not common in taxonomic studies, can help determine relationships between species, since hemoglobins are proteins with well-preserved genes. We found differences in hemoglobin mobility between C. denticulatus, C. carbonarius and morphotype 1 in electrophoresis at alkaline pH, however, the behavior of globin chains was similar between the three groups. High performance liquid chromatography showed different retention times in the globin fractions of C. denticulatus and C. carbonarius, but not between C. carbonarius and morphotype 1, indicating that, possibly, the divergence time between C. carbonarius and morphotype 1 is more recent than the divergence between C. denticulatus and C. carbonarius, due to the highly conserved character of this functional protein. Thus, considering the high degree of conservation of hemoglobins in vertebrates, and the differences observed in electrophoresis at alkaline pH and HPLC, we infer that C. carbonarius and morphotype 1 present a common branch.Universidade Estadual Paulista Julio de Mesquita Filho (UNESP), BrazilFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Scientific and Technological Research of Acre (FAPAC)Univ Fed Acre, Campus Floresta Cruzeiro do Sul, Cruzeiro Do Sul, AC, BrazilInst Nacl de Pesquisas da Amazonia, Dept Genet Conservacao & Biol Evolut, Manaus, Amazonas, BrazilUniv Sao Paulo, Fac Filosofia Ciencias & Letras Ribeirao Preto, Ribeirao Preto, SP, BrazilUniv Fed Oeste Bahia, Ctr Ciencias Biol & Saude, Campus Reitor Edgard Santos, Barreiras, BA, BrazilUniv Estadual Paulista, Inst Biociencias Letras & Ciencias Exatas, Sao Jose Do Rio Preto, SP, BrazilUniv Estadual Paulista, Inst Biociencias Letras & Ciencias Exatas, Sao Jose Do Rio Preto, SP, BrazilFunpec-editoraUniv Fed AcreInst Nacl de Pesquisas da AmazoniaUniversidade de São Paulo (USP)Univ Fed Oeste BahiaUniversidade Estadual Paulista (UNESP)Silva, T. L.Cardoso, V. L. O.Costa, N. R. A.Venancio, L. P. R.Pereira, L. R. [UNESP]Bonini-Domingos, C. R. [UNESP]2022-11-30T13:40:57Z2022-11-30T13:40:57Z2022-07-31info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article9http://dx.doi.org/10.4238/gmr18977Genetics And Molecular Research. Ribeirao Preto: Funpec-editora, v. 21, n. 3, 9 p., 2022.16765680http://hdl.handle.net/11449/23765310.4238/gmr18977WOS:000836395300001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics And Molecular Researchinfo:eu-repo/semantics/openAccess2022-11-30T13:40:57Zoai:repositorio.unesp.br:11449/237653Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462022-11-30T13:40:57Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
title Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
spellingShingle Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
Silva, T. L.
Testudinidae
Hemoglobin
Electrophoresis
Chelonoidis
title_short Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
title_full Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
title_fullStr Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
title_full_unstemmed Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
title_sort Hemoglobin protein profile as a parameter for taxonomic analysis in Brazilian Testudinidae
author Silva, T. L.
author_facet Silva, T. L.
Cardoso, V. L. O.
Costa, N. R. A.
Venancio, L. P. R.
Pereira, L. R. [UNESP]
Bonini-Domingos, C. R. [UNESP]
author_role author
author2 Cardoso, V. L. O.
Costa, N. R. A.
Venancio, L. P. R.
Pereira, L. R. [UNESP]
Bonini-Domingos, C. R. [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Univ Fed Acre
Inst Nacl de Pesquisas da Amazonia
Universidade de São Paulo (USP)
Univ Fed Oeste Bahia
Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv Silva, T. L.
Cardoso, V. L. O.
Costa, N. R. A.
Venancio, L. P. R.
Pereira, L. R. [UNESP]
Bonini-Domingos, C. R. [UNESP]
dc.subject.por.fl_str_mv Testudinidae
Hemoglobin
Electrophoresis
Chelonoidis
topic Testudinidae
Hemoglobin
Electrophoresis
Chelonoidis
description The Brazilian Testudinidae family is widespread across South America. It includes Chelonoidis denticulatus, the largest tortoise in South America and Chelonoidis carbonarius, found mostly in the north and northwestern part of the continent. Using hemoglobin to identify species is cheaper than other methods such as DNA sequencing and can offer useful information, since the hemoglobin molecule is a well-preserved protein chain during the evolution of species. Thus, in order to establish a hemoglobin profile for the Brazilian Testudinidae C. denticulatus, C. carbonarius and morphotype 1, hemoglobin electrophoresis was performed at acid pH in phosphate agar and at alkaline pH in cellulose acetate, in order to visualize the specific fractions of each species. High performance liquid chromatography was used for the quantification of fractions. For an in-depth analysis and better detailing of the hemoglobin profile of the species, polypeptide chain electrophoresis was performed at acid and alkaline pH. We observed differences in the hemoglobin profiles of C. denticulatus in relation to C. carbonarius and morphotype 1, which suggests that this methodology, not common in taxonomic studies, can help determine relationships between species, since hemoglobins are proteins with well-preserved genes. We found differences in hemoglobin mobility between C. denticulatus, C. carbonarius and morphotype 1 in electrophoresis at alkaline pH, however, the behavior of globin chains was similar between the three groups. High performance liquid chromatography showed different retention times in the globin fractions of C. denticulatus and C. carbonarius, but not between C. carbonarius and morphotype 1, indicating that, possibly, the divergence time between C. carbonarius and morphotype 1 is more recent than the divergence between C. denticulatus and C. carbonarius, due to the highly conserved character of this functional protein. Thus, considering the high degree of conservation of hemoglobins in vertebrates, and the differences observed in electrophoresis at alkaline pH and HPLC, we infer that C. carbonarius and morphotype 1 present a common branch.
publishDate 2022
dc.date.none.fl_str_mv 2022-11-30T13:40:57Z
2022-11-30T13:40:57Z
2022-07-31
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.4238/gmr18977
Genetics And Molecular Research. Ribeirao Preto: Funpec-editora, v. 21, n. 3, 9 p., 2022.
16765680
http://hdl.handle.net/11449/237653
10.4238/gmr18977
WOS:000836395300001
url http://dx.doi.org/10.4238/gmr18977
http://hdl.handle.net/11449/237653
identifier_str_mv Genetics And Molecular Research. Ribeirao Preto: Funpec-editora, v. 21, n. 3, 9 p., 2022.
16765680
10.4238/gmr18977
WOS:000836395300001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genetics And Molecular Research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv 9
dc.publisher.none.fl_str_mv Funpec-editora
publisher.none.fl_str_mv Funpec-editora
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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