Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae)
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1206/0003-0090.447.1.1 http://hdl.handle.net/11449/207551 |
Resumo: | True toads of the genus Rhinella are among the most common and diverse group of Neotropical anurans. These toads are widely distributed throughout South America, inhabiting a great diversity of environments and ecoregions. Currently, however, the genus is defined solely on the basis of molecular characters, and it lacks a proper diagnosis. Although some phenetic species groups have traditionally been recognized within Rhinella, the monophyly of some of them have been rejected in previous phylogenetic analyses, and many species remain unassigned to these poorly defined groups. Additionally, the identity and taxonomy of several species are problematic and hinder the specific recognition and description of undescribed taxa. In this work, we first perform phylogenetic analyses of separate mitochondrial and nuclear datasets to test the possible occurrence of hybridization and/or genetic introgression in the genus. The comparative analysis of both datasets revealed unidirectional mitochondrial introgressions of an unknown parental species into R. horribilis (ghost introgression) and of R. dorbignyi into R. bernardoi; therefore, the mitochondrial and nuclear datasets of these species were considered separately in subsequent analyses. We performed total-evidence phylogenetic analyses that included revised molecular (four mitochondrial and five nuclear genes) and phenotypic (90 characters) datasets for 83 nominal species of Rhinella, plus several undescribed and problematic species and multiple outgroups. Results demonstrate that Rhinella was nonmonophyletic due to the position of R. ceratophrys, which was recovered as the sister taxon of Rhaebo nasicus with strong support. Among our outgroups, the strongly supported Anaxyrus + Incilius is the sister clade of all other species of Rhinella. Once R. ceratophrys is excluded, the genus Rhinella is monophyletic, well supported, and composed of two major clades. One of these is moderately supported and includes species of the former R. spinulosa Group (including R. gallardoi); the monophyletic R. granulosa, R. crucifer, and R. marina Groups; and a clade composed of the mitochondrial sequences of R. horribilis. The other major clade is strongly supported and composed of all the species from the non-monophyletic R. veraguensis and R. margaritifera Groups, the former R. acrolopha Group, and R. sternosignata. Consistent with these results, we define eight species groups of Rhinella that are mostly diagnosed by phenotypic synapomorphies in addition to a combination of morphological character states. Rhinella sternosignata is the only species that remains unassigned to any group. We also synonymize nine species, treat three former subspecies as full species, and suggest that 15 lineages represent putative undescribed species. Lastly, we discuss the apparently frequent occurrence of hybridization, deep mitochondrial divergence, and ghost introgression; the incomplete phenotypic evidence (including putative character systems that could be used for future phylogenetic analyses); and the validity of the known fossil record of Rhinella as a source of calibration points for divergence dating analyses. |
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Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae)True toads of the genus Rhinella are among the most common and diverse group of Neotropical anurans. These toads are widely distributed throughout South America, inhabiting a great diversity of environments and ecoregions. Currently, however, the genus is defined solely on the basis of molecular characters, and it lacks a proper diagnosis. Although some phenetic species groups have traditionally been recognized within Rhinella, the monophyly of some of them have been rejected in previous phylogenetic analyses, and many species remain unassigned to these poorly defined groups. Additionally, the identity and taxonomy of several species are problematic and hinder the specific recognition and description of undescribed taxa. In this work, we first perform phylogenetic analyses of separate mitochondrial and nuclear datasets to test the possible occurrence of hybridization and/or genetic introgression in the genus. The comparative analysis of both datasets revealed unidirectional mitochondrial introgressions of an unknown parental species into R. horribilis (ghost introgression) and of R. dorbignyi into R. bernardoi; therefore, the mitochondrial and nuclear datasets of these species were considered separately in subsequent analyses. We performed total-evidence phylogenetic analyses that included revised molecular (four mitochondrial and five nuclear genes) and phenotypic (90 characters) datasets for 83 nominal species of Rhinella, plus several undescribed and problematic species and multiple outgroups. Results demonstrate that Rhinella was nonmonophyletic due to the position of R. ceratophrys, which was recovered as the sister taxon of Rhaebo nasicus with strong support. Among our outgroups, the strongly supported Anaxyrus + Incilius is the sister clade of all other species of Rhinella. Once R. ceratophrys is excluded, the genus Rhinella is monophyletic, well supported, and composed of two major clades. One of these is moderately supported and includes species of the former R. spinulosa Group (including R. gallardoi); the monophyletic R. granulosa, R. crucifer, and R. marina Groups; and a clade composed of the mitochondrial sequences of R. horribilis. The other major clade is strongly supported and composed of all the species from the non-monophyletic R. veraguensis and R. margaritifera Groups, the former R. acrolopha Group, and R. sternosignata. Consistent with these results, we define eight species groups of Rhinella that are mostly diagnosed by phenotypic synapomorphies in addition to a combination of morphological character states. Rhinella sternosignata is the only species that remains unassigned to any group. We also synonymize nine species, treat three former subspecies as full species, and suggest that 15 lineages represent putative undescribed species. Lastly, we discuss the apparently frequent occurrence of hybridization, deep mitochondrial divergence, and ghost introgression; the incomplete phenotypic evidence (including putative character systems that could be used for future phylogenetic analyses); and the validity of the known fossil record of Rhinella as a source of calibration points for divergence dating analyses.Martín O. Pereyra: División Herpetología Museo Argentino de Ciencias Naturales bernardino Rivadavia-CONICETBoris L. Blotto: División Herpetología Museo Argentino de Ciencias Naturales bernardino Rivadavia-CONICETDiego Baldo: Laboratorio de Genética Evolutiva claudio J. Bidau Instituto de Biología Subtropical (IBS CONICET) Universidad Nacional de Misiones (UNaM)Juan C. Chaparro: Museo de Biodiversidad Del Perú Cusco PerúSantiago R. Ron: Museo de Zoología Escuela de Biología Pontificia Universidad Católica Del EcuadorAgustín J. Elias-Costa: División Herpetología Museo Argentino de Ciencias Naturales bernardino Rivadavia-CONICETPatricia P. Iglesias: Laboratorio de Genética Evolutiva claudio J. Bidau Instituto de Biología Subtropical (IBS CONICET) Universidad Nacional de Misiones (UNaM)Pablo J. Venegas: Division de Herpetologia-Centro de Ornitologia y BiodiversidadMaria Tereza C. Thomé: Universidade Estadual Paulista (UNESP) Instituto de Biociências Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP)Jhon Jairo Ospina-Sarria: Departamento de Zoologia Instituto de Biociências Universidade de São PauloNatan M. Maciel: Laboratório de Herpetologia e Comportamento Animal Departamento de Ecologia Instituto de Ciências BiológicasMarco Rada: Departamento de Zoologia Instituto de Biociências Universidade de São PauloFrancisco Kolenc: Sección Herpetología Museo Nacional de Historia NaturalClaudio Borteiro: Sección Herpetología Museo Nacional de Historia NaturalMauricio Rivera-Correa: Grupo Herpetológico de Antioquia Instituto de Biología Universidad de AntioquiaFernando J.M. Rojas-Runjaic: Fundación la Salle de Ciencias Naturales Museo de Historia Natural la Salle (MHNLS)Jií Moravec: Department of Zoology National MuseumIgnacio de la Riva: Museo Nacional de Ciencias Naturales (MNCN-CSIC)Ward C. Wheeler: Division of Invertebrate Zoology American Museum of Natural HistorySantiago Castroviejo-Fisher: Pontifícia Universidade Católica Do Rio Grande Do sul Porto AlegreTaran Grant: Departamento de Zoologia Instituto de Biociências Universidade de São PauloCélio F.B. Haddad: Universidade Estadual Paulista (UNESP) Instituto de Biociências Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP)Julián Faivovich: División Herpetología Museo Argentino de Ciencias Naturales bernardino Rivadavia-CONICETMaria Tereza C. Thomé: Universidade Estadual Paulista (UNESP) Instituto de Biociências Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP)Célio F.B. Haddad: Universidade Estadual Paulista (UNESP) Instituto de Biociências Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP)Museo Argentino de Ciencias Naturales bernardino Rivadavia-CONICETUniversidad Nacional de Misiones (UNaM)Cusco PerúPontificia Universidad Católica Del EcuadorPablo J. Venegas: Division de Herpetologia-Centro de Ornitologia y BiodiversidadUniversidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Universidade Federal de Goiás (UFG)Museo Nacional de Historia NaturalUniversidad de AntioquiaMuseo de Historia Natural la Salle (MHNLS)National MuseumIgnacio de la Riva: Museo Nacional de Ciencias Naturales (MNCN-CSIC)American Museum of Natural HistoryPorto AlegrePereyra, Martín O.Blotto, Boris L.Baldo, DiegoChaparro, Juan C.Ron, Santiago R.Elias-Costa, Agustín J.Iglesias, Patricia P.Venegas, Pablo J.C. Thomé, Maria Tereza [UNESP]Ospina-Sarria, Jhon JairoMaciel, Natan M.Rada, MarcoKolenc, FranciscoBorteiro, ClaudioRivera-Correa, MauricioRojas-Runjaic, Fernando J.M.Moravec, JiíDe La Riva, IgnacioWheeler, Ward C.Castroviejo-Fisher, SantiagoGrant, TaranHaddad, Célio F.B. [UNESP]Faivovich, Julián2021-06-25T10:57:06Z2021-06-25T10:57:06Z2021-03-31info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-156http://dx.doi.org/10.1206/0003-0090.447.1.1Bulletin of the American Museum of Natural History, v. 447, n. 1, p. 1-156, 2021.0003-0090http://hdl.handle.net/11449/20755110.1206/0003-0090.447.1.12-s2.0-85103597581Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBulletin of the American Museum of Natural Historyinfo:eu-repo/semantics/openAccess2024-04-09T15:43:25Zoai:repositorio.unesp.br:11449/207551Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:30:18.518489Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
title |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
spellingShingle |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) Pereyra, Martín O. |
title_short |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
title_full |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
title_fullStr |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
title_full_unstemmed |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
title_sort |
Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae) |
author |
Pereyra, Martín O. |
author_facet |
Pereyra, Martín O. Blotto, Boris L. Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustín J. Iglesias, Patricia P. Venegas, Pablo J. C. Thomé, Maria Tereza [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J.M. Moravec, Jií De La Riva, Ignacio Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Célio F.B. [UNESP] Faivovich, Julián |
author_role |
author |
author2 |
Blotto, Boris L. Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustín J. Iglesias, Patricia P. Venegas, Pablo J. C. Thomé, Maria Tereza [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J.M. Moravec, Jií De La Riva, Ignacio Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Célio F.B. [UNESP] Faivovich, Julián |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Museo Argentino de Ciencias Naturales bernardino Rivadavia-CONICET Universidad Nacional de Misiones (UNaM) Cusco Perú Pontificia Universidad Católica Del Ecuador Pablo J. Venegas: Division de Herpetologia-Centro de Ornitologia y Biodiversidad Universidade Estadual Paulista (Unesp) Universidade de São Paulo (USP) Universidade Federal de Goiás (UFG) Museo Nacional de Historia Natural Universidad de Antioquia Museo de Historia Natural la Salle (MHNLS) National Museum Ignacio de la Riva: Museo Nacional de Ciencias Naturales (MNCN-CSIC) American Museum of Natural History Porto Alegre |
dc.contributor.author.fl_str_mv |
Pereyra, Martín O. Blotto, Boris L. Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustín J. Iglesias, Patricia P. Venegas, Pablo J. C. Thomé, Maria Tereza [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J.M. Moravec, Jií De La Riva, Ignacio Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Célio F.B. [UNESP] Faivovich, Julián |
description |
True toads of the genus Rhinella are among the most common and diverse group of Neotropical anurans. These toads are widely distributed throughout South America, inhabiting a great diversity of environments and ecoregions. Currently, however, the genus is defined solely on the basis of molecular characters, and it lacks a proper diagnosis. Although some phenetic species groups have traditionally been recognized within Rhinella, the monophyly of some of them have been rejected in previous phylogenetic analyses, and many species remain unassigned to these poorly defined groups. Additionally, the identity and taxonomy of several species are problematic and hinder the specific recognition and description of undescribed taxa. In this work, we first perform phylogenetic analyses of separate mitochondrial and nuclear datasets to test the possible occurrence of hybridization and/or genetic introgression in the genus. The comparative analysis of both datasets revealed unidirectional mitochondrial introgressions of an unknown parental species into R. horribilis (ghost introgression) and of R. dorbignyi into R. bernardoi; therefore, the mitochondrial and nuclear datasets of these species were considered separately in subsequent analyses. We performed total-evidence phylogenetic analyses that included revised molecular (four mitochondrial and five nuclear genes) and phenotypic (90 characters) datasets for 83 nominal species of Rhinella, plus several undescribed and problematic species and multiple outgroups. Results demonstrate that Rhinella was nonmonophyletic due to the position of R. ceratophrys, which was recovered as the sister taxon of Rhaebo nasicus with strong support. Among our outgroups, the strongly supported Anaxyrus + Incilius is the sister clade of all other species of Rhinella. Once R. ceratophrys is excluded, the genus Rhinella is monophyletic, well supported, and composed of two major clades. One of these is moderately supported and includes species of the former R. spinulosa Group (including R. gallardoi); the monophyletic R. granulosa, R. crucifer, and R. marina Groups; and a clade composed of the mitochondrial sequences of R. horribilis. The other major clade is strongly supported and composed of all the species from the non-monophyletic R. veraguensis and R. margaritifera Groups, the former R. acrolopha Group, and R. sternosignata. Consistent with these results, we define eight species groups of Rhinella that are mostly diagnosed by phenotypic synapomorphies in addition to a combination of morphological character states. Rhinella sternosignata is the only species that remains unassigned to any group. We also synonymize nine species, treat three former subspecies as full species, and suggest that 15 lineages represent putative undescribed species. Lastly, we discuss the apparently frequent occurrence of hybridization, deep mitochondrial divergence, and ghost introgression; the incomplete phenotypic evidence (including putative character systems that could be used for future phylogenetic analyses); and the validity of the known fossil record of Rhinella as a source of calibration points for divergence dating analyses. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-25T10:57:06Z 2021-06-25T10:57:06Z 2021-03-31 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1206/0003-0090.447.1.1 Bulletin of the American Museum of Natural History, v. 447, n. 1, p. 1-156, 2021. 0003-0090 http://hdl.handle.net/11449/207551 10.1206/0003-0090.447.1.1 2-s2.0-85103597581 |
url |
http://dx.doi.org/10.1206/0003-0090.447.1.1 http://hdl.handle.net/11449/207551 |
identifier_str_mv |
Bulletin of the American Museum of Natural History, v. 447, n. 1, p. 1-156, 2021. 0003-0090 10.1206/0003-0090.447.1.1 2-s2.0-85103597581 |
dc.language.iso.fl_str_mv |
eng |
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eng |
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Bulletin of the American Museum of Natural History |
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info:eu-repo/semantics/openAccess |
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openAccess |
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1-156 |
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Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
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UNESP |
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UNESP |
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Repositório Institucional da UNESP |
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Repositório Institucional da UNESP |
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Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
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1808129432921047040 |