EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE)
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1017/s0007485321000067 |
Texto Completo: | http://dx.doi.org/10.1017/s0007485321000067 http://hdl.handle.net/11449/210190 |
Resumo: | True toads of the genus Rhinella are among the most common and diverse group of Neotropical anurans. These toads are widely distributed throughout South America, inhabiting a great diversity of environments and ecoregions. Currently, however, the genus is defined solely on the basis of molecular characters, and it lacks a proper diagnosis. Although some phenetic species groups have traditionally been recognized within Rhinella, the monophyly of some of them have been rejected in previous phylogenetic analyses, and many species remain unassigned to these poorly defined groups. Additionally, the identity and taxonomy of several species are problematic and hinder the specific recognition and description of undescribed taxa. In this work, we first perform phylogenetic analyses of separate mitochondrial and nuclear datasets to test the possible occurrence of hybridization and/or genetic introgression in the genus. The comparative analysis of both datasets revealed unidirectional mitochondrial introgressions of an unknown parental species into R. horribilis (ghost introgression) and of R. dorbignyi into R. bernardoi; therefore, the mitochondrial and nuclear datasets of these species were considered separately in subsequent analyses. We performed total-evidence phylogenetic analyses that included revised molecular (four mitochondrial and five nuclear genes) and phenotypic (90 characters) datasets for 83 nominal species of Rhinella, plus several undescribed and problematic species and multiple outgroups. Results demonstrate that Rhinella was nonmonophyletic due to the position of R. ceratophrys, which was recovered as the sister taxon of Rhaebo nasicus with strong support. Among our outgroups, the strongly supported Anaxyrus + Incilius is the sister clade of all other species of Rhinella. Once R. ceratophrys is excluded, the genus Rhinella is monophyletic, well supported, and composed of two major clades. One of these is moderately supported and includes species of the former R. spinulosa Group (including R. gallardoi); the monophyletic R. granulosa, R. crucifer, and R. marina Groups; and a clade composed of the mitochondrial sequences of R. horribilis. The other major clade is strongly supported and composed of all the species from the non-monophyletic R. veraguensis and R. margaritifera Groups, the former R. acrolopha Group, and R. sternosignata. Consistent with these results, we define eight species groups of Rhinella that are mostly diagnosed by phenotypic synapomorphies in addition to a combination of morphological character states. Rhinella sternosignata is the only species that remains unassigned to any group. We also synonymize nine species, treat three former subspecies as full species, and suggest that 15 lineages represent putative undescribed species. Lastly, we discuss the apparently frequent occurrence of hybridization, deep mitochondrial divergence, and ghost introgression; the incomplete phenotypic evidence (including putative character systems that could be used for future phylogenetic analyses); and the validity of the known fossil record of Rhinella as a source of calibration points for divergence dating analyses. |
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EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE)True toads of the genus Rhinella are among the most common and diverse group of Neotropical anurans. These toads are widely distributed throughout South America, inhabiting a great diversity of environments and ecoregions. Currently, however, the genus is defined solely on the basis of molecular characters, and it lacks a proper diagnosis. Although some phenetic species groups have traditionally been recognized within Rhinella, the monophyly of some of them have been rejected in previous phylogenetic analyses, and many species remain unassigned to these poorly defined groups. Additionally, the identity and taxonomy of several species are problematic and hinder the specific recognition and description of undescribed taxa. In this work, we first perform phylogenetic analyses of separate mitochondrial and nuclear datasets to test the possible occurrence of hybridization and/or genetic introgression in the genus. The comparative analysis of both datasets revealed unidirectional mitochondrial introgressions of an unknown parental species into R. horribilis (ghost introgression) and of R. dorbignyi into R. bernardoi; therefore, the mitochondrial and nuclear datasets of these species were considered separately in subsequent analyses. We performed total-evidence phylogenetic analyses that included revised molecular (four mitochondrial and five nuclear genes) and phenotypic (90 characters) datasets for 83 nominal species of Rhinella, plus several undescribed and problematic species and multiple outgroups. Results demonstrate that Rhinella was nonmonophyletic due to the position of R. ceratophrys, which was recovered as the sister taxon of Rhaebo nasicus with strong support. Among our outgroups, the strongly supported Anaxyrus + Incilius is the sister clade of all other species of Rhinella. Once R. ceratophrys is excluded, the genus Rhinella is monophyletic, well supported, and composed of two major clades. One of these is moderately supported and includes species of the former R. spinulosa Group (including R. gallardoi); the monophyletic R. granulosa, R. crucifer, and R. marina Groups; and a clade composed of the mitochondrial sequences of R. horribilis. The other major clade is strongly supported and composed of all the species from the non-monophyletic R. veraguensis and R. margaritifera Groups, the former R. acrolopha Group, and R. sternosignata. Consistent with these results, we define eight species groups of Rhinella that are mostly diagnosed by phenotypic synapomorphies in addition to a combination of morphological character states. Rhinella sternosignata is the only species that remains unassigned to any group. We also synonymize nine species, treat three former subspecies as full species, and suggest that 15 lineages represent putative undescribed species. Lastly, we discuss the apparently frequent occurrence of hybridization, deep mitochondrial divergence, and ghost introgression; the incomplete phenotypic evidence (including putative character systems that could be used for future phylogenetic analyses); and the validity of the known fossil record of Rhinella as a source of calibration points for divergence dating analyses.Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET)ANPCyTFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Ministry of Culture of the Czech RepublicConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Secretaria Nacional de Educacion Superior, Ciencia, Tecnologia e Innovacion del Ecuador SENESCYT (Arca de Noe initiative)Pontificia Universidad Catolica del Ecuador, Direccion General AcademicaConsejo Nacl Invest Cient & Tecn, Museo Argentino Ciencias Nat Bernardino Rivadavia, Div Herpetol, Buenos Aires, DF, ArgentinaUniv Nacl Misiones UNaM, Lab Genet Evolut Claudio J Bidau, Inst Biol Subtrop IBS, CONICET, Posadas, Misiones, ArgentinaUniv Estadual Paulista, UNESP, Inst Biociencias, Dept Biodiversidade, Rio Claro, SP, BrazilUniv Estadual Paulista, UNESP, Ctr Aquicultura CAUNESP, Rio Claro, SP, BrazilUniv Sao Paulo, Inst Biociencias, Dept Zool, Sao Paulo, BrazilMuseo Biodiversidad Peru, Cuzco, PeruUniv Nacl San Antonio Abad Cusco, Museo Hist Nat, Cuzco, PeruPontificia Univ Catolica Ecuador, Escuela Biol, Museo Zool, Quito, EcuadorCtr Ornitol & Biodiversidad CORBIDI, Div Herpetol, Lima, PeruFdn Invest Biodiversidad & Conservac Trop, Calima, Cali, ColombiaUniv Fed Goias, Inst Ciencias Biol, Dept Ecol, Lab Herpetol & Comportamento Anim, Goiania, Go, BrazilMuseo Nacl Hist Nat, Secc Herpetol, Montevideo, UruguayUniv Antioquia, Inst Biol, Grp Herpetol Antioquia, Medellin, ColombiaMuseo Hist Nat La Salle MHNLS, Fdn La Salle Ciencias Nat, Caracas, VenezuelaPontificia Univ Catolica Rio Grande do Sul PUCRS, Porto Alegre, RS, BrazilNatl Museum, Dept Zool, Prague, Czech RepublicCSIC, Museo Nacl Ciencias Nat MNCN, Madrid, SpainAmer Museum Nat Hist, Div Invertebrate Zool, New York, NY 10024 USAAmer Museum Nat Hist, Herpetol, Div Vertebrate Zool, New York, NY 10024 USAUniv Buenos Aires, Fac Ciencias Exactas & Nat, Dept Biodiversidad & Biol Expt, Buenos Aires, DF, ArgentinaUniv Estadual Paulista, UNESP, Inst Biociencias, Dept Biodiversidade, Rio Claro, SP, BrazilUniv Estadual Paulista, UNESP, Ctr Aquicultura CAUNESP, Rio Claro, SP, BrazilConsejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): PIP 11220110100889Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): PICT 2013-0404Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): 2015-0813Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): 2015-0820Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): 2015-2381Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): 2017-2437Consejo Nacional de Investigaciones Cientificas y Tecnicas (CONICET): 2018-3349ANPCyT: PIP 11220110100889ANPCyT: PICT 2013-0404ANPCyT: 2015-0813ANPCyT: 2015-0820ANPCyT: 2015-2381ANPCyT: 2017-2437ANPCyT: 2018-3349FAPESP: PIP 11220110100889FAPESP: PICT 2013-0404FAPESP: 2015-0813FAPESP: 2015-0820FAPESP: 2015-2381FAPESP: 2017-2437FAPESP: 2018-3349FAPESP: 2012/10000-5FAPESP: 2013/20423-3FAPESP: 2013/50741-7FAPESP: 2014/03585-2FAPESP: 2015/11237-7FAPESP: 2016/25070-0FAPESP: 2018/15425-0CAPES: 2016.1.263.41.6Ministry of Culture of the Czech Republic: DKRVO 2021/6.VI.cMinistry of Culture of the Czech Republic: 00023272CNPq: 312744/2017-0CNPq: 306623/2018-8CAPES: 88887.508359/2020-00CNPq: 306823/2017-9Amer Museum Natural HistoryConsejo Nacl Invest Cient & TecnUniv Nacl Misiones UNaMUniversidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Museo Biodiversidad PeruUniv Nacl San Antonio Abad CuscoPontificia Univ Catolica EcuadorCtr Ornitol & Biodiversidad CORBIDIFdn Invest Biodiversidad & Conservac TropUniversidade Federal de Goiás (UFG)Museo Nacl Hist NatUniv AntioquiaMuseo Hist Nat La Salle MHNLSPontificia Univ Catolica Rio Grande do Sul PUCRSNatl MuseumCSICAmer Museum Nat HistUniv Buenos AiresPereyra, Martin O.Blotto, Boris L. [UNESP]Baldo, DiegoChaparro, Juan C.Ron, Santiago R.Elias-Costa, Agustin J.Iglesias, Patricia P.Venegas, Pablo J.Thome, Maria Tereza C. [UNESP]Ospina-Sarria, Jhon JairoMaciel, Natan M.Rada, MarcoKolenc, FranciscoBorteiro, ClaudioRivera-Correa, MauricioRojas-Runjaic, Fernando J. M.Moravec, Jirila Riva, Ignacio deWheeler, Ward C.Castroviejo-Fisher, SantiagoGrant, TaranHaddad, Celio F. B. [UNESP]Faivovich, Julian2021-06-25T15:00:53Z2021-06-25T15:00:53Z2021-03-31info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-155http://dx.doi.org/10.1017/s0007485321000067Bulletin Of The American Museum Of Natural History. New York: Amer Museum Natural History, n. 447, p. 1-155, 2021.0003-0090http://hdl.handle.net/11449/21019010.1017/s0007485321000067WOS:000636616500001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBulletin Of The American Museum Of Natural Historyinfo:eu-repo/semantics/openAccess2024-04-09T15:30:07Zoai:repositorio.unesp.br:11449/210190Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:47:30.269462Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
title |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
spellingShingle |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) Pereyra, Martin O. Pereyra, Martin O. |
title_short |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
title_full |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
title_fullStr |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
title_full_unstemmed |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
title_sort |
EVOLUTION IN THE GENUS RHINELLA: A TOTAL EVIDENCE PHYLOGENETIC ANALYSIS OF NEOTROPICAL TRUE TOADS (ANURA: BUFONIDAE) |
author |
Pereyra, Martin O. |
author_facet |
Pereyra, Martin O. Pereyra, Martin O. Blotto, Boris L. [UNESP] Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustin J. Iglesias, Patricia P. Venegas, Pablo J. Thome, Maria Tereza C. [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J. M. Moravec, Jiri la Riva, Ignacio de Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Celio F. B. [UNESP] Faivovich, Julian Blotto, Boris L. [UNESP] Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustin J. Iglesias, Patricia P. Venegas, Pablo J. Thome, Maria Tereza C. [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J. M. Moravec, Jiri la Riva, Ignacio de Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Celio F. B. [UNESP] Faivovich, Julian |
author_role |
author |
author2 |
Blotto, Boris L. [UNESP] Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustin J. Iglesias, Patricia P. Venegas, Pablo J. Thome, Maria Tereza C. [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J. M. Moravec, Jiri la Riva, Ignacio de Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Celio F. B. [UNESP] Faivovich, Julian |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Consejo Nacl Invest Cient & Tecn Univ Nacl Misiones UNaM Universidade Estadual Paulista (Unesp) Universidade de São Paulo (USP) Museo Biodiversidad Peru Univ Nacl San Antonio Abad Cusco Pontificia Univ Catolica Ecuador Ctr Ornitol & Biodiversidad CORBIDI Fdn Invest Biodiversidad & Conservac Trop Universidade Federal de Goiás (UFG) Museo Nacl Hist Nat Univ Antioquia Museo Hist Nat La Salle MHNLS Pontificia Univ Catolica Rio Grande do Sul PUCRS Natl Museum CSIC Amer Museum Nat Hist Univ Buenos Aires |
dc.contributor.author.fl_str_mv |
Pereyra, Martin O. Blotto, Boris L. [UNESP] Baldo, Diego Chaparro, Juan C. Ron, Santiago R. Elias-Costa, Agustin J. Iglesias, Patricia P. Venegas, Pablo J. Thome, Maria Tereza C. [UNESP] Ospina-Sarria, Jhon Jairo Maciel, Natan M. Rada, Marco Kolenc, Francisco Borteiro, Claudio Rivera-Correa, Mauricio Rojas-Runjaic, Fernando J. M. Moravec, Jiri la Riva, Ignacio de Wheeler, Ward C. Castroviejo-Fisher, Santiago Grant, Taran Haddad, Celio F. B. [UNESP] Faivovich, Julian |
description |
True toads of the genus Rhinella are among the most common and diverse group of Neotropical anurans. These toads are widely distributed throughout South America, inhabiting a great diversity of environments and ecoregions. Currently, however, the genus is defined solely on the basis of molecular characters, and it lacks a proper diagnosis. Although some phenetic species groups have traditionally been recognized within Rhinella, the monophyly of some of them have been rejected in previous phylogenetic analyses, and many species remain unassigned to these poorly defined groups. Additionally, the identity and taxonomy of several species are problematic and hinder the specific recognition and description of undescribed taxa. In this work, we first perform phylogenetic analyses of separate mitochondrial and nuclear datasets to test the possible occurrence of hybridization and/or genetic introgression in the genus. The comparative analysis of both datasets revealed unidirectional mitochondrial introgressions of an unknown parental species into R. horribilis (ghost introgression) and of R. dorbignyi into R. bernardoi; therefore, the mitochondrial and nuclear datasets of these species were considered separately in subsequent analyses. We performed total-evidence phylogenetic analyses that included revised molecular (four mitochondrial and five nuclear genes) and phenotypic (90 characters) datasets for 83 nominal species of Rhinella, plus several undescribed and problematic species and multiple outgroups. Results demonstrate that Rhinella was nonmonophyletic due to the position of R. ceratophrys, which was recovered as the sister taxon of Rhaebo nasicus with strong support. Among our outgroups, the strongly supported Anaxyrus + Incilius is the sister clade of all other species of Rhinella. Once R. ceratophrys is excluded, the genus Rhinella is monophyletic, well supported, and composed of two major clades. One of these is moderately supported and includes species of the former R. spinulosa Group (including R. gallardoi); the monophyletic R. granulosa, R. crucifer, and R. marina Groups; and a clade composed of the mitochondrial sequences of R. horribilis. The other major clade is strongly supported and composed of all the species from the non-monophyletic R. veraguensis and R. margaritifera Groups, the former R. acrolopha Group, and R. sternosignata. Consistent with these results, we define eight species groups of Rhinella that are mostly diagnosed by phenotypic synapomorphies in addition to a combination of morphological character states. Rhinella sternosignata is the only species that remains unassigned to any group. We also synonymize nine species, treat three former subspecies as full species, and suggest that 15 lineages represent putative undescribed species. Lastly, we discuss the apparently frequent occurrence of hybridization, deep mitochondrial divergence, and ghost introgression; the incomplete phenotypic evidence (including putative character systems that could be used for future phylogenetic analyses); and the validity of the known fossil record of Rhinella as a source of calibration points for divergence dating analyses. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-25T15:00:53Z 2021-06-25T15:00:53Z 2021-03-31 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1017/s0007485321000067 Bulletin Of The American Museum Of Natural History. New York: Amer Museum Natural History, n. 447, p. 1-155, 2021. 0003-0090 http://hdl.handle.net/11449/210190 10.1017/s0007485321000067 WOS:000636616500001 |
url |
http://dx.doi.org/10.1017/s0007485321000067 http://hdl.handle.net/11449/210190 |
identifier_str_mv |
Bulletin Of The American Museum Of Natural History. New York: Amer Museum Natural History, n. 447, p. 1-155, 2021. 0003-0090 10.1017/s0007485321000067 WOS:000636616500001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
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Bulletin Of The American Museum Of Natural History |
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openAccess |
dc.format.none.fl_str_mv |
1-155 |
dc.publisher.none.fl_str_mv |
Amer Museum Natural History |
publisher.none.fl_str_mv |
Amer Museum Natural History |
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Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
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Repositório Institucional da UNESP |
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Repositório Institucional da UNESP |
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Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1822182344186920960 |
dc.identifier.doi.none.fl_str_mv |
10.1017/s0007485321000067 |