How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation

Detalhes bibliográficos
Autor(a) principal: Robin, Agnès
Data de Publicação: 2019
Outros Autores: Pradier, Céline, Sanguin, Hervé, Mahé, Frédéric, Lambais, George Rodrigues, de Araujo Pereira, Arthur Prudêncio, Germon, Amandine [UNESP], Santana, Maiele Cintra, Tisseyre, Pierre, Pablo, Anne-Laure, Heuillard, Pauline, Sauvadet, Marie, Bouillet, Jean-Pierre, Andreote, Fernando Dini, Plassard, Claude, de Moraes Gonçalves, José Léonardo, Cardoso, Elke Jurandy Bran Nogueira, Laclau, Jean-Paul, Hinsinger, Philippe, Jourdan, Christophe
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s00572-019-00917-y
http://hdl.handle.net/11449/198164
Resumo: Despite the strong ecological importance of ectomycorrhizal (ECM) fungi, their vertical distribution remains poorly understood. To our knowledge, ECM structures associated with trees have never been reported in depths below 2 meters. In this study, fine roots and ECM root tips were sampled down to 4-m depth during the digging of two independent pits differing by their water availability. A meta-barcoding approach based on Illumina sequencing of internal transcribed spacers (ITS1 and ITS2) was carried out on DNA extracted from root samples (fine roots and ECM root tips separately). ECM fungi dominated the root-associated fungal community, with more than 90% of sequences assigned to the genus Pisolithus. The morphological and barcoding results demonstrated, for the first time, the presence of ECM symbiosis down to 4-m. The molecular diversity of Pisolithus spp. was strongly dependent on depth, with soil pH and soil water content as primary drivers of the Pisolithus spp. structure. Altogether, our results highlight the importance to consider the ECM symbiosis in deep soil layers to improve our understanding of fine roots functioning in tropical soils.
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spelling How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantationDeep fine rootsDiversityECM root tipsEucalyptus grandisNext-generation sequencingTropical forest plantationsDespite the strong ecological importance of ectomycorrhizal (ECM) fungi, their vertical distribution remains poorly understood. To our knowledge, ECM structures associated with trees have never been reported in depths below 2 meters. In this study, fine roots and ECM root tips were sampled down to 4-m depth during the digging of two independent pits differing by their water availability. A meta-barcoding approach based on Illumina sequencing of internal transcribed spacers (ITS1 and ITS2) was carried out on DNA extracted from root samples (fine roots and ECM root tips separately). ECM fungi dominated the root-associated fungal community, with more than 90% of sequences assigned to the genus Pisolithus. The morphological and barcoding results demonstrated, for the first time, the presence of ECM symbiosis down to 4-m. The molecular diversity of Pisolithus spp. was strongly dependent on depth, with soil pH and soil water content as primary drivers of the Pisolithus spp. structure. Altogether, our results highlight the importance to consider the ECM symbiosis in deep soil layers to improve our understanding of fine roots functioning in tropical soils.Centre de Coopération Internationale en Recherche Agronomique pour le DéveloppementCIRAD UMR Eco&SolsEco&Sols Univ Montpellier CIRAD INRA IRD Montpellier SupAgroESALQ University São PauloCIRAD UMR BGPIBGPI Univ Montpellier CIRAD INRA IRD Montpellier SupAgroCENA University São PauloFederal University of CearáUNESP University São PauloLSTM Univ Montpellier CIRAD INRA IRD Montpellier SupAgroINRA US 1426 GeT-PlaGe GenotoulUNESP University São PauloUMR Eco&SolsMontpellier SupAgroUniversity São PauloUMR BGPIFederal University of CearáUniversidade Estadual Paulista (Unesp)GenotoulRobin, AgnèsPradier, CélineSanguin, HervéMahé, FrédéricLambais, George Rodriguesde Araujo Pereira, Arthur PrudêncioGermon, Amandine [UNESP]Santana, Maiele CintraTisseyre, PierrePablo, Anne-LaureHeuillard, PaulineSauvadet, MarieBouillet, Jean-PierreAndreote, Fernando DiniPlassard, Claudede Moraes Gonçalves, José LéonardoCardoso, Elke Jurandy Bran NogueiraLaclau, Jean-PaulHinsinger, PhilippeJourdan, Christophe2020-12-12T01:05:23Z2020-12-12T01:05:23Z2019-11-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article637-648http://dx.doi.org/10.1007/s00572-019-00917-yMycorrhiza, v. 29, n. 6, p. 637-648, 2019.1432-18900940-6360http://hdl.handle.net/11449/19816410.1007/s00572-019-00917-y2-s2.0-85075244542Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMycorrhizainfo:eu-repo/semantics/openAccess2021-10-23T09:34:06Zoai:repositorio.unesp.br:11449/198164Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T09:34:06Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
title How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
spellingShingle How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
Robin, Agnès
Deep fine roots
Diversity
ECM root tips
Eucalyptus grandis
Next-generation sequencing
Tropical forest plantations
title_short How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
title_full How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
title_fullStr How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
title_full_unstemmed How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
title_sort How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
author Robin, Agnès
author_facet Robin, Agnès
Pradier, Céline
Sanguin, Hervé
Mahé, Frédéric
Lambais, George Rodrigues
de Araujo Pereira, Arthur Prudêncio
Germon, Amandine [UNESP]
Santana, Maiele Cintra
Tisseyre, Pierre
Pablo, Anne-Laure
Heuillard, Pauline
Sauvadet, Marie
Bouillet, Jean-Pierre
Andreote, Fernando Dini
Plassard, Claude
de Moraes Gonçalves, José Léonardo
Cardoso, Elke Jurandy Bran Nogueira
Laclau, Jean-Paul
Hinsinger, Philippe
Jourdan, Christophe
author_role author
author2 Pradier, Céline
Sanguin, Hervé
Mahé, Frédéric
Lambais, George Rodrigues
de Araujo Pereira, Arthur Prudêncio
Germon, Amandine [UNESP]
Santana, Maiele Cintra
Tisseyre, Pierre
Pablo, Anne-Laure
Heuillard, Pauline
Sauvadet, Marie
Bouillet, Jean-Pierre
Andreote, Fernando Dini
Plassard, Claude
de Moraes Gonçalves, José Léonardo
Cardoso, Elke Jurandy Bran Nogueira
Laclau, Jean-Paul
Hinsinger, Philippe
Jourdan, Christophe
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv UMR Eco&Sols
Montpellier SupAgro
University São Paulo
UMR BGPI
Federal University of Ceará
Universidade Estadual Paulista (Unesp)
Genotoul
dc.contributor.author.fl_str_mv Robin, Agnès
Pradier, Céline
Sanguin, Hervé
Mahé, Frédéric
Lambais, George Rodrigues
de Araujo Pereira, Arthur Prudêncio
Germon, Amandine [UNESP]
Santana, Maiele Cintra
Tisseyre, Pierre
Pablo, Anne-Laure
Heuillard, Pauline
Sauvadet, Marie
Bouillet, Jean-Pierre
Andreote, Fernando Dini
Plassard, Claude
de Moraes Gonçalves, José Léonardo
Cardoso, Elke Jurandy Bran Nogueira
Laclau, Jean-Paul
Hinsinger, Philippe
Jourdan, Christophe
dc.subject.por.fl_str_mv Deep fine roots
Diversity
ECM root tips
Eucalyptus grandis
Next-generation sequencing
Tropical forest plantations
topic Deep fine roots
Diversity
ECM root tips
Eucalyptus grandis
Next-generation sequencing
Tropical forest plantations
description Despite the strong ecological importance of ectomycorrhizal (ECM) fungi, their vertical distribution remains poorly understood. To our knowledge, ECM structures associated with trees have never been reported in depths below 2 meters. In this study, fine roots and ECM root tips were sampled down to 4-m depth during the digging of two independent pits differing by their water availability. A meta-barcoding approach based on Illumina sequencing of internal transcribed spacers (ITS1 and ITS2) was carried out on DNA extracted from root samples (fine roots and ECM root tips separately). ECM fungi dominated the root-associated fungal community, with more than 90% of sequences assigned to the genus Pisolithus. The morphological and barcoding results demonstrated, for the first time, the presence of ECM symbiosis down to 4-m. The molecular diversity of Pisolithus spp. was strongly dependent on depth, with soil pH and soil water content as primary drivers of the Pisolithus spp. structure. Altogether, our results highlight the importance to consider the ECM symbiosis in deep soil layers to improve our understanding of fine roots functioning in tropical soils.
publishDate 2019
dc.date.none.fl_str_mv 2019-11-01
2020-12-12T01:05:23Z
2020-12-12T01:05:23Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s00572-019-00917-y
Mycorrhiza, v. 29, n. 6, p. 637-648, 2019.
1432-1890
0940-6360
http://hdl.handle.net/11449/198164
10.1007/s00572-019-00917-y
2-s2.0-85075244542
url http://dx.doi.org/10.1007/s00572-019-00917-y
http://hdl.handle.net/11449/198164
identifier_str_mv Mycorrhiza, v. 29, n. 6, p. 637-648, 2019.
1432-1890
0940-6360
10.1007/s00572-019-00917-y
2-s2.0-85075244542
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mycorrhiza
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 637-648
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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