Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study

Detalhes bibliográficos
Autor(a) principal: Povinelli, Ana Paula Ribeiro [UNESP]
Data de Publicação: 2021
Outros Autores: Zazeri, Gabriel [UNESP], Jones, Alan M., Cornélio, Marinônio Lopes [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/ph14121298
http://hdl.handle.net/11449/230072
Resumo: Piperlongumine (PPL) is an alkaloid extracted from several pepper species that exhibits anti-inflammatory and anti-carcinogenic properties. Nevertheless, the molecular mode of action of PPL that confers such powerful pharmacological properties remains unknown. From this perspec-tive, spectroscopic methods aided by computational modeling were employed to characterize the interaction between PPL and nucleotide-binding domain of heat shock protein 70 (NBD/HSP70), which is involved in the pathogenesis of several diseases. Steady-state fluorescence spectroscopy along with time-resolved fluorescence revealed the complex formation based on a static quenching mechanism. Van’t Hoff analyses showed that the binding of PPL toward NBD is driven by equivalent contributions of entropic and enthalpic factors. Furthermore, IDF and Scatchard methods applied to fluorescence intensities determined two cooperative binding sites with Kb of (6.3 ± 0.2) × 104 M−1. Circular dichroism determined the thermal stability of the NBD domain and showed that PPL caused minor changes in the protein secondary structure. Computational simulations elucidated the mi-croenvironment of these interactions, showing that the binding sites are composed mainly of polar amino acids and the predominant interaction of PPL with NBD is Van der Waals in nature.
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spelling Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico studyCircular dichroismFluorescence spectroscopyHeat shock proteinHSP70Molecular dockingMolecular dynamicsMolecular mechanics Poisson–Boltzmann surface areaNucleotide-binding domainPiperlonguminePiperlongumine (PPL) is an alkaloid extracted from several pepper species that exhibits anti-inflammatory and anti-carcinogenic properties. Nevertheless, the molecular mode of action of PPL that confers such powerful pharmacological properties remains unknown. From this perspec-tive, spectroscopic methods aided by computational modeling were employed to characterize the interaction between PPL and nucleotide-binding domain of heat shock protein 70 (NBD/HSP70), which is involved in the pathogenesis of several diseases. Steady-state fluorescence spectroscopy along with time-resolved fluorescence revealed the complex formation based on a static quenching mechanism. Van’t Hoff analyses showed that the binding of PPL toward NBD is driven by equivalent contributions of entropic and enthalpic factors. Furthermore, IDF and Scatchard methods applied to fluorescence intensities determined two cooperative binding sites with Kb of (6.3 ± 0.2) × 104 M−1. Circular dichroism determined the thermal stability of the NBD domain and showed that PPL caused minor changes in the protein secondary structure. Computational simulations elucidated the mi-croenvironment of these interactions, showing that the binding sites are composed mainly of polar amino acids and the predominant interaction of PPL with NBD is Van der Waals in nature.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Departamento de Física Instituto de Biociências Letras e Ciências Exatas (IBILCE) Universidade Estadual Paulista (UNESP), Rua Cristovão Colombo 2265School of Pharmacy University of Birmingham, EdgbastonDepartamento de Física Instituto de Biociências Letras e Ciências Exatas (IBILCE) Universidade Estadual Paulista (UNESP), Rua Cristovão Colombo 2265CAPES: 001CNPq: 141953/2017-9FAPESP: 2017/08834-9Universidade Estadual Paulista (UNESP)University of BirminghamPovinelli, Ana Paula Ribeiro [UNESP]Zazeri, Gabriel [UNESP]Jones, Alan M.Cornélio, Marinônio Lopes [UNESP]2022-04-29T08:37:31Z2022-04-29T08:37:31Z2021-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/ph14121298Pharmaceuticals, v. 14, n. 12, 2021.1424-8247http://hdl.handle.net/11449/23007210.3390/ph141212982-s2.0-85121295299Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPharmaceuticalsinfo:eu-repo/semantics/openAccess2022-04-29T08:37:31Zoai:repositorio.unesp.br:11449/230072Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-06T00:07:30.844487Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
title Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
spellingShingle Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
Povinelli, Ana Paula Ribeiro [UNESP]
Circular dichroism
Fluorescence spectroscopy
Heat shock protein
HSP70
Molecular docking
Molecular dynamics
Molecular mechanics Poisson–Boltzmann surface area
Nucleotide-binding domain
Piperlongumine
title_short Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
title_full Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
title_fullStr Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
title_full_unstemmed Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
title_sort Unravelling the interaction of piperlongumine with the nucleotide-binding domain of hsp70: A spectroscopic and in silico study
author Povinelli, Ana Paula Ribeiro [UNESP]
author_facet Povinelli, Ana Paula Ribeiro [UNESP]
Zazeri, Gabriel [UNESP]
Jones, Alan M.
Cornélio, Marinônio Lopes [UNESP]
author_role author
author2 Zazeri, Gabriel [UNESP]
Jones, Alan M.
Cornélio, Marinônio Lopes [UNESP]
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
University of Birmingham
dc.contributor.author.fl_str_mv Povinelli, Ana Paula Ribeiro [UNESP]
Zazeri, Gabriel [UNESP]
Jones, Alan M.
Cornélio, Marinônio Lopes [UNESP]
dc.subject.por.fl_str_mv Circular dichroism
Fluorescence spectroscopy
Heat shock protein
HSP70
Molecular docking
Molecular dynamics
Molecular mechanics Poisson–Boltzmann surface area
Nucleotide-binding domain
Piperlongumine
topic Circular dichroism
Fluorescence spectroscopy
Heat shock protein
HSP70
Molecular docking
Molecular dynamics
Molecular mechanics Poisson–Boltzmann surface area
Nucleotide-binding domain
Piperlongumine
description Piperlongumine (PPL) is an alkaloid extracted from several pepper species that exhibits anti-inflammatory and anti-carcinogenic properties. Nevertheless, the molecular mode of action of PPL that confers such powerful pharmacological properties remains unknown. From this perspec-tive, spectroscopic methods aided by computational modeling were employed to characterize the interaction between PPL and nucleotide-binding domain of heat shock protein 70 (NBD/HSP70), which is involved in the pathogenesis of several diseases. Steady-state fluorescence spectroscopy along with time-resolved fluorescence revealed the complex formation based on a static quenching mechanism. Van’t Hoff analyses showed that the binding of PPL toward NBD is driven by equivalent contributions of entropic and enthalpic factors. Furthermore, IDF and Scatchard methods applied to fluorescence intensities determined two cooperative binding sites with Kb of (6.3 ± 0.2) × 104 M−1. Circular dichroism determined the thermal stability of the NBD domain and showed that PPL caused minor changes in the protein secondary structure. Computational simulations elucidated the mi-croenvironment of these interactions, showing that the binding sites are composed mainly of polar amino acids and the predominant interaction of PPL with NBD is Van der Waals in nature.
publishDate 2021
dc.date.none.fl_str_mv 2021-12-01
2022-04-29T08:37:31Z
2022-04-29T08:37:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/ph14121298
Pharmaceuticals, v. 14, n. 12, 2021.
1424-8247
http://hdl.handle.net/11449/230072
10.3390/ph14121298
2-s2.0-85121295299
url http://dx.doi.org/10.3390/ph14121298
http://hdl.handle.net/11449/230072
identifier_str_mv Pharmaceuticals, v. 14, n. 12, 2021.
1424-8247
10.3390/ph14121298
2-s2.0-85121295299
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Pharmaceuticals
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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