Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein

Detalhes bibliográficos
Autor(a) principal: Ortlieb, Liliane O.
Data de Publicação: 2022
Outros Autores: Caruso, Ícaro P. [UNESP], Mebus-Antunes, Nathane C., Da Poian, Andrea T., Petronilho, Elaine da C., Figueroa-Villar, José Daniel, Nascimento, Claudia J., Almeida, Fabio C. L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/14756366.2021.2004591
http://hdl.handle.net/11449/230055
Resumo: We synthesised and screened 18 aromatic derivatives of guanylhydrazones and oximes aromatic for their capacity to bind to dengue virus capsid protein (DENVC). The intended therapeutic target was the hydrophobic cleft of DENVC, which is a region responsible for its anchoring in lipid droplets in the infected cells. The inhibition of this process completely suppresses virus infectivity. Using NMR, we describe five compounds able to bind to the α1-α2 interface in the hydrophobic cleft. Saturation transfer difference experiments showed that the aromatic protons of the ligands are important for the interaction with DENVC. Fluorescence binding isotherms indicated that the selected compounds bind at micromolar affinities, possibly leading to binding-induced conformational changes. NMR-derived docking calculations of ligands showed that they position similarly in the hydrophobic cleft. Cytotoxicity experiments and calculations of in silico drug properties suggest that these compounds may be promising candidates in the search for antivirals targeting DENVC.
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spelling Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid proteinDengue virusDENVCdrug-ligand interactionfluorescenceNMRWe synthesised and screened 18 aromatic derivatives of guanylhydrazones and oximes aromatic for their capacity to bind to dengue virus capsid protein (DENVC). The intended therapeutic target was the hydrophobic cleft of DENVC, which is a region responsible for its anchoring in lipid droplets in the infected cells. The inhibition of this process completely suppresses virus infectivity. Using NMR, we describe five compounds able to bind to the α1-α2 interface in the hydrophobic cleft. Saturation transfer difference experiments showed that the aromatic protons of the ligands are important for the interaction with DENVC. Fluorescence binding isotherms indicated that the selected compounds bind at micromolar affinities, possibly leading to binding-induced conformational changes. NMR-derived docking calculations of ligands showed that they position similarly in the hydrophobic cleft. Cytotoxicity experiments and calculations of in silico drug properties suggest that these compounds may be promising candidates in the search for antivirals targeting DENVC.Department of Chemistry Military Institute of Engineering (IME)Institute of Medical Biochemistry Leopoldo de Meis (IBqM) and National Center for Structural Biology and Bioimaging (CENABIO) Federal University of Rio de Janeiro (UFRJ)Multiuser Center for Biomolecular Innovation (CMIB) and Department of Physics Institute of Biosciences Letters and Exact Sciences (IBILCE) São Paulo State University (UNESP)Institute of Medical Biochemistry Leopoldo de Meis (IBqM) Federal University of Rio de Janeiro (UFRJ)Department of Natural Sciences Institute of Biosciences Federal University of the State of Rio de Janeiro (UNIRIO)Multiuser Center for Biomolecular Innovation (CMIB) and Department of Physics Institute of Biosciences Letters and Exact Sciences (IBILCE) São Paulo State University (UNESP)Military Institute of Engineering (IME)Universidade Federal do Rio de Janeiro (UFRJ)Universidade Estadual Paulista (UNESP)Federal University of the State of Rio de Janeiro (UNIRIO)Ortlieb, Liliane O.Caruso, Ícaro P. [UNESP]Mebus-Antunes, Nathane C.Da Poian, Andrea T.Petronilho, Elaine da C.Figueroa-Villar, José DanielNascimento, Claudia J.Almeida, Fabio C. L.2022-04-29T08:37:21Z2022-04-29T08:37:21Z2022-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article287-298http://dx.doi.org/10.1080/14756366.2021.2004591Journal of Enzyme Inhibition and Medicinal Chemistry, v. 37, n. 1, p. 287-298, 2022.1475-63741475-6366http://hdl.handle.net/11449/23005510.1080/14756366.2021.20045912-s2.0-85121137057Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Enzyme Inhibition and Medicinal Chemistryinfo:eu-repo/semantics/openAccess2022-04-29T08:37:22Zoai:repositorio.unesp.br:11449/230055Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:42:47.501321Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
title Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
spellingShingle Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
Ortlieb, Liliane O.
Dengue virus
DENVC
drug-ligand interaction
fluorescence
NMR
title_short Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
title_full Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
title_fullStr Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
title_full_unstemmed Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
title_sort Searching for drug leads targeted to the hydrophobic cleft of dengue virus capsid protein
author Ortlieb, Liliane O.
author_facet Ortlieb, Liliane O.
Caruso, Ícaro P. [UNESP]
Mebus-Antunes, Nathane C.
Da Poian, Andrea T.
Petronilho, Elaine da C.
Figueroa-Villar, José Daniel
Nascimento, Claudia J.
Almeida, Fabio C. L.
author_role author
author2 Caruso, Ícaro P. [UNESP]
Mebus-Antunes, Nathane C.
Da Poian, Andrea T.
Petronilho, Elaine da C.
Figueroa-Villar, José Daniel
Nascimento, Claudia J.
Almeida, Fabio C. L.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Military Institute of Engineering (IME)
Universidade Federal do Rio de Janeiro (UFRJ)
Universidade Estadual Paulista (UNESP)
Federal University of the State of Rio de Janeiro (UNIRIO)
dc.contributor.author.fl_str_mv Ortlieb, Liliane O.
Caruso, Ícaro P. [UNESP]
Mebus-Antunes, Nathane C.
Da Poian, Andrea T.
Petronilho, Elaine da C.
Figueroa-Villar, José Daniel
Nascimento, Claudia J.
Almeida, Fabio C. L.
dc.subject.por.fl_str_mv Dengue virus
DENVC
drug-ligand interaction
fluorescence
NMR
topic Dengue virus
DENVC
drug-ligand interaction
fluorescence
NMR
description We synthesised and screened 18 aromatic derivatives of guanylhydrazones and oximes aromatic for their capacity to bind to dengue virus capsid protein (DENVC). The intended therapeutic target was the hydrophobic cleft of DENVC, which is a region responsible for its anchoring in lipid droplets in the infected cells. The inhibition of this process completely suppresses virus infectivity. Using NMR, we describe five compounds able to bind to the α1-α2 interface in the hydrophobic cleft. Saturation transfer difference experiments showed that the aromatic protons of the ligands are important for the interaction with DENVC. Fluorescence binding isotherms indicated that the selected compounds bind at micromolar affinities, possibly leading to binding-induced conformational changes. NMR-derived docking calculations of ligands showed that they position similarly in the hydrophobic cleft. Cytotoxicity experiments and calculations of in silico drug properties suggest that these compounds may be promising candidates in the search for antivirals targeting DENVC.
publishDate 2022
dc.date.none.fl_str_mv 2022-04-29T08:37:21Z
2022-04-29T08:37:21Z
2022-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/14756366.2021.2004591
Journal of Enzyme Inhibition and Medicinal Chemistry, v. 37, n. 1, p. 287-298, 2022.
1475-6374
1475-6366
http://hdl.handle.net/11449/230055
10.1080/14756366.2021.2004591
2-s2.0-85121137057
url http://dx.doi.org/10.1080/14756366.2021.2004591
http://hdl.handle.net/11449/230055
identifier_str_mv Journal of Enzyme Inhibition and Medicinal Chemistry, v. 37, n. 1, p. 287-298, 2022.
1475-6374
1475-6366
10.1080/14756366.2021.2004591
2-s2.0-85121137057
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Enzyme Inhibition and Medicinal Chemistry
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 287-298
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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