Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1111/ajt.16807 http://hdl.handle.net/11449/222352 |
Resumo: | This analysis, using data from the Brazilian kidney transplant (KT) COVID-19 study, seeks to develop a prediction score to assist in COVID-19 risk stratification in KT recipients. In this study, 1379 patients (35 sites) were enrolled, and a machine learning approach was used to fit models in a derivation cohort. A reduced Elastic Net model was selected, and the accuracy to predict the 28-day fatality after the COVID-19 diagnosis, assessed by the area under the ROC curve (AUC-ROC), was confirmed in a validation cohort. The better calibration values were used to build the applicable ImAgeS score. The 28-day fatality rate was 17% (n = 235), which was associated with increasing age, hypertension and cardiovascular disease, higher body mass index, dyspnea, and use of mycophenolate acid or azathioprine. Higher kidney graft function, longer time of symptoms until COVID-19 diagnosis, presence of anosmia or coryza, and use of mTOR inhibitor were associated with reduced risk of death. The coefficients of the best model were used to build the predictive score, which achieved an AUC-ROC of 0.767 (95% CI 0.698–0.834) in the validation cohort. In conclusion, the easily applicable predictive model could assist health care practitioners in identifying non-hospitalized kidney transplant patients that may require more intensive monitoring. Trial registration: ClinicalTrials.gov NCT04494776. |
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Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipientsThis analysis, using data from the Brazilian kidney transplant (KT) COVID-19 study, seeks to develop a prediction score to assist in COVID-19 risk stratification in KT recipients. In this study, 1379 patients (35 sites) were enrolled, and a machine learning approach was used to fit models in a derivation cohort. A reduced Elastic Net model was selected, and the accuracy to predict the 28-day fatality after the COVID-19 diagnosis, assessed by the area under the ROC curve (AUC-ROC), was confirmed in a validation cohort. The better calibration values were used to build the applicable ImAgeS score. The 28-day fatality rate was 17% (n = 235), which was associated with increasing age, hypertension and cardiovascular disease, higher body mass index, dyspnea, and use of mycophenolate acid or azathioprine. Higher kidney graft function, longer time of symptoms until COVID-19 diagnosis, presence of anosmia or coryza, and use of mTOR inhibitor were associated with reduced risk of death. The coefficients of the best model were used to build the predictive score, which achieved an AUC-ROC of 0.767 (95% CI 0.698–0.834) in the validation cohort. In conclusion, the easily applicable predictive model could assist health care practitioners in identifying non-hospitalized kidney transplant patients that may require more intensive monitoring. Trial registration: ClinicalTrials.gov NCT04494776.Department of Internal Medicine Universidade Estadual Paulista-UNESPDepartment of Clinical Medicine Federal University of CearáHospital Universitário Walter CantídioHospital Geral de FortalezaDepartment of Medicine Nephrology Division Federal University of São PauloDepartment of Transplantation Hospital do Rim Fundação Oswaldo RamosRenal Transplant Unit Hospital Israelita Albert EinsteinSanta Casa de Misericórdia de Porto AlegreHospital de Base Medical School FAMERPFederal University of MaranhãoHospital de Clínicas de Porto Alegre Federal Univertisy of Rio Grande do SulDivision of Nephrology and Kidney Transplantation Onofre Lopes University HospitalHospital Santa IsabelDivision of Nephrology School of Medical Sciences Renal Transplant Unit Renal Transplant Research Laboratoy University of Campinas – UNICAMPHospital de Base de BrasíliaHospital Beneficência Portuguesa de São Paulo (BP)Division of Nephrology School of Medicine of Ribeirão Preto University of Sao PauloHospital Santa MarcelinaHospital Universitário de Brasília University of Brasília - UnB, DFHospital São Francisco na Providência de DeusDepartment of Internal Medicine Universidade Estadual Paulista-UNESPUniversidade Estadual Paulista (UNESP)Federal University of CearáHospital Universitário Walter CantídioHospital Geral de FortalezaUniversidade de São Paulo (USP)Fundação Oswaldo RamosHospital Israelita Albert EinsteinSanta Casa de Misericórdia de Porto AlegreMedical School FAMERPFederal University of MaranhãoFederal Univertisy of Rio Grande do SulOnofre Lopes University HospitalHospital Santa IsabelUniversidade Estadual de Campinas (UNICAMP)Hospital de Base de BrasíliaHospital Beneficência Portuguesa de São Paulo (BP)Hospital Santa MarcelinaUniversity of Brasília - UnBHospital São Francisco na Providência de DeusModelli de Andrade, Luis Gustavo [UNESP]de Sandes-Freitas, Tainá VerasRequião-Moura, Lúcio R.Viana, Laila AlmeidaCristelli, Marina PontelloGarcia, Valter DuroAlcântara, Aline Lima CunhaEsmeraldo, Ronaldo de MatosAbbud Filho, MarioPacheco-Silva, Alvarode Lima Carneiro, Erika Cristina RibeiroManfro, Roberto CerattiCosta, Kellen Micheline Alves HenriqueSimão, Denise Rodriguesde Sousa, Marcos ViniciusSantana, Viviane Brandão Bandeira de MelloNoronha, Irene L.Romão, Elen AlmeidaZanocco, Juliana AparecidaArimatea, Gustavo Guilherme QueirozDe Boni Monteiro de Carvalho, DeiseTedesco-Silva, HelioMedina-Pestana, JoséKeitel, ElizeteCosta de Oliveira, Claudia MariaNeri, Beatriz de OliveiraFernandes Charpiot, Ida Maria MaximinaFerreira, Teresa Cristina AlvesVicari, Alessandra RosaPereira, TomásCoelho, Maria Eduarda Heinzen de AlmeidaMazzali, MarildaFerreira, Gustavo FernandesCampos, Juliana BastosRocha, Nicole Gomes CamposSaldanha, Anita Leme da RochaMartinez, Tania Leme da RochaRomão, João EgídioTeixeira Araújo, Maria ReginaBraga, Sibele LessaDeboni, Luciane MônicaKrüger, Franco Silveira da MotaNeto, Miguel MoysésClaudino, Auro BuffaniCláudio de Oliveira, LíviaMatuck, Tereza AzevedoBignelli, Alexandre TortozaHokazono, Silvia ReginaSuassuna, José Hermógenes RoccoRioja, Suzimar da SilveiraMadeira, Rafael LageVilaça, Sandra SimoneCalazans, Carlos Alberto ChalabiCalazans, Daniel Costa ChalabiMalafronte, PatríciaMiorin, Antoniode Aguiar, Filipe CarrilhoAndrade, Larissa Guedes da Fontede Carvalho, Fabiana LossMartins, Karoline SesiukPinheiro, Hélady SandersSertório, Emiliana SpadarottoPereira, André BarretoMachado, David José BarrosPozzi, Carolina MariaKroth, Leonardo VilianoFilho, Lauro Monteiro VasconcellosMaciel, Rafael FabioSilva, Amanda Maíra DamascenoBaptista, Ana Paula Maiade Souza, Pedro Augusto MacedoLasmar, Marcus FariaSaber, Luciana Tanajura SantamariaPalma, Lilian Monteiro Pereirade Barros Almeida, Ricardo Augusto Monteiro2022-04-28T19:44:11Z2022-04-28T19:44:11Z2022-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article610-625http://dx.doi.org/10.1111/ajt.16807American Journal of Transplantation, v. 22, n. 2, p. 610-625, 2022.1600-61431600-6135http://hdl.handle.net/11449/22235210.1111/ajt.168072-s2.0-85114287120Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengAmerican Journal of Transplantationinfo:eu-repo/semantics/openAccess2022-04-28T19:44:12Zoai:repositorio.unesp.br:11449/222352Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:28:49.198105Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
title |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
spellingShingle |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients Modelli de Andrade, Luis Gustavo [UNESP] |
title_short |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
title_full |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
title_fullStr |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
title_full_unstemmed |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
title_sort |
Development and validation of a simple web-based tool for early prediction of COVID-19-associated death in kidney transplant recipients |
author |
Modelli de Andrade, Luis Gustavo [UNESP] |
author_facet |
Modelli de Andrade, Luis Gustavo [UNESP] de Sandes-Freitas, Tainá Veras Requião-Moura, Lúcio R. Viana, Laila Almeida Cristelli, Marina Pontello Garcia, Valter Duro Alcântara, Aline Lima Cunha Esmeraldo, Ronaldo de Matos Abbud Filho, Mario Pacheco-Silva, Alvaro de Lima Carneiro, Erika Cristina Ribeiro Manfro, Roberto Ceratti Costa, Kellen Micheline Alves Henrique Simão, Denise Rodrigues de Sousa, Marcos Vinicius Santana, Viviane Brandão Bandeira de Mello Noronha, Irene L. Romão, Elen Almeida Zanocco, Juliana Aparecida Arimatea, Gustavo Guilherme Queiroz De Boni Monteiro de Carvalho, Deise Tedesco-Silva, Helio Medina-Pestana, José Keitel, Elizete Costa de Oliveira, Claudia Maria Neri, Beatriz de Oliveira Fernandes Charpiot, Ida Maria Maximina Ferreira, Teresa Cristina Alves Vicari, Alessandra Rosa Pereira, Tomás Coelho, Maria Eduarda Heinzen de Almeida Mazzali, Marilda Ferreira, Gustavo Fernandes Campos, Juliana Bastos Rocha, Nicole Gomes Campos Saldanha, Anita Leme da Rocha Martinez, Tania Leme da Rocha Romão, João Egídio Teixeira Araújo, Maria Regina Braga, Sibele Lessa Deboni, Luciane Mônica Krüger, Franco Silveira da Mota Neto, Miguel Moysés Claudino, Auro Buffani Cláudio de Oliveira, Lívia Matuck, Tereza Azevedo Bignelli, Alexandre Tortoza Hokazono, Silvia Regina Suassuna, José Hermógenes Rocco Rioja, Suzimar da Silveira Madeira, Rafael Lage Vilaça, Sandra Simone Calazans, Carlos Alberto Chalabi Calazans, Daniel Costa Chalabi Malafronte, Patrícia Miorin, Antonio de Aguiar, Filipe Carrilho Andrade, Larissa Guedes da Fonte de Carvalho, Fabiana Loss Martins, Karoline Sesiuk Pinheiro, Hélady Sanders Sertório, Emiliana Spadarotto Pereira, André Barreto Machado, David José Barros Pozzi, Carolina Maria Kroth, Leonardo Viliano Filho, Lauro Monteiro Vasconcellos Maciel, Rafael Fabio Silva, Amanda Maíra Damasceno Baptista, Ana Paula Maia de Souza, Pedro Augusto Macedo Lasmar, Marcus Faria Saber, Luciana Tanajura Santamaria Palma, Lilian Monteiro Pereira de Barros Almeida, Ricardo Augusto Monteiro |
author_role |
author |
author2 |
de Sandes-Freitas, Tainá Veras Requião-Moura, Lúcio R. Viana, Laila Almeida Cristelli, Marina Pontello Garcia, Valter Duro Alcântara, Aline Lima Cunha Esmeraldo, Ronaldo de Matos Abbud Filho, Mario Pacheco-Silva, Alvaro de Lima Carneiro, Erika Cristina Ribeiro Manfro, Roberto Ceratti Costa, Kellen Micheline Alves Henrique Simão, Denise Rodrigues de Sousa, Marcos Vinicius Santana, Viviane Brandão Bandeira de Mello Noronha, Irene L. Romão, Elen Almeida Zanocco, Juliana Aparecida Arimatea, Gustavo Guilherme Queiroz De Boni Monteiro de Carvalho, Deise Tedesco-Silva, Helio Medina-Pestana, José Keitel, Elizete Costa de Oliveira, Claudia Maria Neri, Beatriz de Oliveira Fernandes Charpiot, Ida Maria Maximina Ferreira, Teresa Cristina Alves Vicari, Alessandra Rosa Pereira, Tomás Coelho, Maria Eduarda Heinzen de Almeida Mazzali, Marilda Ferreira, Gustavo Fernandes Campos, Juliana Bastos Rocha, Nicole Gomes Campos Saldanha, Anita Leme da Rocha Martinez, Tania Leme da Rocha Romão, João Egídio Teixeira Araújo, Maria Regina Braga, Sibele Lessa Deboni, Luciane Mônica Krüger, Franco Silveira da Mota Neto, Miguel Moysés Claudino, Auro Buffani Cláudio de Oliveira, Lívia Matuck, Tereza Azevedo Bignelli, Alexandre Tortoza Hokazono, Silvia Regina Suassuna, José Hermógenes Rocco Rioja, Suzimar da Silveira Madeira, Rafael Lage Vilaça, Sandra Simone Calazans, Carlos Alberto Chalabi Calazans, Daniel Costa Chalabi Malafronte, Patrícia Miorin, Antonio de Aguiar, Filipe Carrilho Andrade, Larissa Guedes da Fonte de Carvalho, Fabiana Loss Martins, Karoline Sesiuk Pinheiro, Hélady Sanders Sertório, Emiliana Spadarotto Pereira, André Barreto Machado, David José Barros Pozzi, Carolina Maria Kroth, Leonardo Viliano Filho, Lauro Monteiro Vasconcellos Maciel, Rafael Fabio Silva, Amanda Maíra Damasceno Baptista, Ana Paula Maia de Souza, Pedro Augusto Macedo Lasmar, Marcus Faria Saber, Luciana Tanajura Santamaria Palma, Lilian Monteiro Pereira de Barros Almeida, Ricardo Augusto Monteiro |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) Federal University of Ceará Hospital Universitário Walter Cantídio Hospital Geral de Fortaleza Universidade de São Paulo (USP) Fundação Oswaldo Ramos Hospital Israelita Albert Einstein Santa Casa de Misericórdia de Porto Alegre Medical School FAMERP Federal University of Maranhão Federal Univertisy of Rio Grande do Sul Onofre Lopes University Hospital Hospital Santa Isabel Universidade Estadual de Campinas (UNICAMP) Hospital de Base de Brasília Hospital Beneficência Portuguesa de São Paulo (BP) Hospital Santa Marcelina University of Brasília - UnB Hospital São Francisco na Providência de Deus |
dc.contributor.author.fl_str_mv |
Modelli de Andrade, Luis Gustavo [UNESP] de Sandes-Freitas, Tainá Veras Requião-Moura, Lúcio R. Viana, Laila Almeida Cristelli, Marina Pontello Garcia, Valter Duro Alcântara, Aline Lima Cunha Esmeraldo, Ronaldo de Matos Abbud Filho, Mario Pacheco-Silva, Alvaro de Lima Carneiro, Erika Cristina Ribeiro Manfro, Roberto Ceratti Costa, Kellen Micheline Alves Henrique Simão, Denise Rodrigues de Sousa, Marcos Vinicius Santana, Viviane Brandão Bandeira de Mello Noronha, Irene L. Romão, Elen Almeida Zanocco, Juliana Aparecida Arimatea, Gustavo Guilherme Queiroz De Boni Monteiro de Carvalho, Deise Tedesco-Silva, Helio Medina-Pestana, José Keitel, Elizete Costa de Oliveira, Claudia Maria Neri, Beatriz de Oliveira Fernandes Charpiot, Ida Maria Maximina Ferreira, Teresa Cristina Alves Vicari, Alessandra Rosa Pereira, Tomás Coelho, Maria Eduarda Heinzen de Almeida Mazzali, Marilda Ferreira, Gustavo Fernandes Campos, Juliana Bastos Rocha, Nicole Gomes Campos Saldanha, Anita Leme da Rocha Martinez, Tania Leme da Rocha Romão, João Egídio Teixeira Araújo, Maria Regina Braga, Sibele Lessa Deboni, Luciane Mônica Krüger, Franco Silveira da Mota Neto, Miguel Moysés Claudino, Auro Buffani Cláudio de Oliveira, Lívia Matuck, Tereza Azevedo Bignelli, Alexandre Tortoza Hokazono, Silvia Regina Suassuna, José Hermógenes Rocco Rioja, Suzimar da Silveira Madeira, Rafael Lage Vilaça, Sandra Simone Calazans, Carlos Alberto Chalabi Calazans, Daniel Costa Chalabi Malafronte, Patrícia Miorin, Antonio de Aguiar, Filipe Carrilho Andrade, Larissa Guedes da Fonte de Carvalho, Fabiana Loss Martins, Karoline Sesiuk Pinheiro, Hélady Sanders Sertório, Emiliana Spadarotto Pereira, André Barreto Machado, David José Barros Pozzi, Carolina Maria Kroth, Leonardo Viliano Filho, Lauro Monteiro Vasconcellos Maciel, Rafael Fabio Silva, Amanda Maíra Damasceno Baptista, Ana Paula Maia de Souza, Pedro Augusto Macedo Lasmar, Marcus Faria Saber, Luciana Tanajura Santamaria Palma, Lilian Monteiro Pereira de Barros Almeida, Ricardo Augusto Monteiro |
description |
This analysis, using data from the Brazilian kidney transplant (KT) COVID-19 study, seeks to develop a prediction score to assist in COVID-19 risk stratification in KT recipients. In this study, 1379 patients (35 sites) were enrolled, and a machine learning approach was used to fit models in a derivation cohort. A reduced Elastic Net model was selected, and the accuracy to predict the 28-day fatality after the COVID-19 diagnosis, assessed by the area under the ROC curve (AUC-ROC), was confirmed in a validation cohort. The better calibration values were used to build the applicable ImAgeS score. The 28-day fatality rate was 17% (n = 235), which was associated with increasing age, hypertension and cardiovascular disease, higher body mass index, dyspnea, and use of mycophenolate acid or azathioprine. Higher kidney graft function, longer time of symptoms until COVID-19 diagnosis, presence of anosmia or coryza, and use of mTOR inhibitor were associated with reduced risk of death. The coefficients of the best model were used to build the predictive score, which achieved an AUC-ROC of 0.767 (95% CI 0.698–0.834) in the validation cohort. In conclusion, the easily applicable predictive model could assist health care practitioners in identifying non-hospitalized kidney transplant patients that may require more intensive monitoring. Trial registration: ClinicalTrials.gov NCT04494776. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-04-28T19:44:11Z 2022-04-28T19:44:11Z 2022-02-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1111/ajt.16807 American Journal of Transplantation, v. 22, n. 2, p. 610-625, 2022. 1600-6143 1600-6135 http://hdl.handle.net/11449/222352 10.1111/ajt.16807 2-s2.0-85114287120 |
url |
http://dx.doi.org/10.1111/ajt.16807 http://hdl.handle.net/11449/222352 |
identifier_str_mv |
American Journal of Transplantation, v. 22, n. 2, p. 610-625, 2022. 1600-6143 1600-6135 10.1111/ajt.16807 2-s2.0-85114287120 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
American Journal of Transplantation |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
610-625 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128519004225536 |