Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic

Detalhes bibliográficos
Autor(a) principal: Pereira, Danillo Roberto
Data de Publicação: 2018
Outros Autores: Papa, Joao Paulo [UNESP], Rosalin Saraiva, Gustavo Francisco, Souza, Gustavo Maia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.compag.2017.12.024
http://hdl.handle.net/11449/166017
Resumo: In plants, there are different types of electrical signals involving changes in membrane potentials that could encode electrical information related to physiological states when plants are stimulated by different environmental conditions. A previous study analyzing traits of the dynamics of whole plant low-voltage electrical showed, for instance, that some specific frequencies that can be observed on plants growing under undisturbed conditions disappear after stress-like environments, such as cold, low light and osmotic stimuli. In this paper, we propose to test different methods of automatic classification in order to identify when different environmental cues cause specific changes in the electrical signals of plants. In order to verify such hypothesis, we used machine learning algorithms (Artificial Neural Networks, Convolutional Neural Network, Optimum-Path Forest, k-Nearest Neighbors and Support Vector Machine) together Interval Arithmetic. The results indicated that Interval Arithmetic and supervised classifiers are more suitable than deep learning techniques, showing promising results towards such research area.
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spelling Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmeticPlant stressOptimum-Path ForestConvolutional Neural NetworksInterval ArithmeticIn plants, there are different types of electrical signals involving changes in membrane potentials that could encode electrical information related to physiological states when plants are stimulated by different environmental conditions. A previous study analyzing traits of the dynamics of whole plant low-voltage electrical showed, for instance, that some specific frequencies that can be observed on plants growing under undisturbed conditions disappear after stress-like environments, such as cold, low light and osmotic stimuli. In this paper, we propose to test different methods of automatic classification in order to identify when different environmental cues cause specific changes in the electrical signals of plants. In order to verify such hypothesis, we used machine learning algorithms (Artificial Neural Networks, Convolutional Neural Network, Optimum-Path Forest, k-Nearest Neighbors and Support Vector Machine) together Interval Arithmetic. The results indicated that Interval Arithmetic and supervised classifiers are more suitable than deep learning techniques, showing promising results towards such research area.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Oeste Paulista, Sao Paulo, BrazilUniv Estadual Paulista, Sao Paulo, BrazilUniv Fed Pelotas, Pelotas, RS, BrazilUniv Estadual Paulista, Sao Paulo, BrazilFAPESP: 2013/07375-0FAPESP: 2014/16250-9FAPESP: 2014/12236-1FAPESP: 2016/19403-6CNPq: 306166/2014-3Elsevier B.V.Univ Oeste PaulistaUniversidade Estadual Paulista (Unesp)Univ Fed PelotasPereira, Danillo RobertoPapa, Joao Paulo [UNESP]Rosalin Saraiva, Gustavo FranciscoSouza, Gustavo Maia2018-11-29T08:01:21Z2018-11-29T08:01:21Z2018-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article35-42application/pdfhttp://dx.doi.org/10.1016/j.compag.2017.12.024Computers And Electronics In Agriculture. Oxford: Elsevier Sci Ltd, v. 145, p. 35-42, 2018.0168-1699http://hdl.handle.net/11449/16601710.1016/j.compag.2017.12.024WOS:000425577400005WOS000425577400005.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengComputers And Electronics In Agricultureinfo:eu-repo/semantics/openAccess2024-04-23T16:10:42Zoai:repositorio.unesp.br:11449/166017Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-04-23T16:10:42Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
title Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
spellingShingle Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
Pereira, Danillo Roberto
Plant stress
Optimum-Path Forest
Convolutional Neural Networks
Interval Arithmetic
title_short Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
title_full Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
title_fullStr Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
title_full_unstemmed Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
title_sort Automatic classification of plant electrophysiological responses to environmental stimuli using machine learning and interval arithmetic
author Pereira, Danillo Roberto
author_facet Pereira, Danillo Roberto
Papa, Joao Paulo [UNESP]
Rosalin Saraiva, Gustavo Francisco
Souza, Gustavo Maia
author_role author
author2 Papa, Joao Paulo [UNESP]
Rosalin Saraiva, Gustavo Francisco
Souza, Gustavo Maia
author2_role author
author
author
dc.contributor.none.fl_str_mv Univ Oeste Paulista
Universidade Estadual Paulista (Unesp)
Univ Fed Pelotas
dc.contributor.author.fl_str_mv Pereira, Danillo Roberto
Papa, Joao Paulo [UNESP]
Rosalin Saraiva, Gustavo Francisco
Souza, Gustavo Maia
dc.subject.por.fl_str_mv Plant stress
Optimum-Path Forest
Convolutional Neural Networks
Interval Arithmetic
topic Plant stress
Optimum-Path Forest
Convolutional Neural Networks
Interval Arithmetic
description In plants, there are different types of electrical signals involving changes in membrane potentials that could encode electrical information related to physiological states when plants are stimulated by different environmental conditions. A previous study analyzing traits of the dynamics of whole plant low-voltage electrical showed, for instance, that some specific frequencies that can be observed on plants growing under undisturbed conditions disappear after stress-like environments, such as cold, low light and osmotic stimuli. In this paper, we propose to test different methods of automatic classification in order to identify when different environmental cues cause specific changes in the electrical signals of plants. In order to verify such hypothesis, we used machine learning algorithms (Artificial Neural Networks, Convolutional Neural Network, Optimum-Path Forest, k-Nearest Neighbors and Support Vector Machine) together Interval Arithmetic. The results indicated that Interval Arithmetic and supervised classifiers are more suitable than deep learning techniques, showing promising results towards such research area.
publishDate 2018
dc.date.none.fl_str_mv 2018-11-29T08:01:21Z
2018-11-29T08:01:21Z
2018-02-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.compag.2017.12.024
Computers And Electronics In Agriculture. Oxford: Elsevier Sci Ltd, v. 145, p. 35-42, 2018.
0168-1699
http://hdl.handle.net/11449/166017
10.1016/j.compag.2017.12.024
WOS:000425577400005
WOS000425577400005.pdf
url http://dx.doi.org/10.1016/j.compag.2017.12.024
http://hdl.handle.net/11449/166017
identifier_str_mv Computers And Electronics In Agriculture. Oxford: Elsevier Sci Ltd, v. 145, p. 35-42, 2018.
0168-1699
10.1016/j.compag.2017.12.024
WOS:000425577400005
WOS000425577400005.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Computers And Electronics In Agriculture
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 35-42
application/pdf
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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