Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.toxcx.2019.100009 http://hdl.handle.net/11449/187408 |
Resumo: | Several snake species possess, in their circulating blood, endogenous PLA 2 inhibitors (sbPLIs) with the primary function of natural protection against toxic enzymes from homologous and heterologous venoms. Among the three structural classes of sbPLIs – named α, β, and γ − the β class (sbβPLIs) is the least known with only four identified sequences, so far. The last class of inhibitors encompass molecules with leucine rich repeats (LRRs) motifs containing repeating amino acid segments. In the present study, we identified and characterized putative sbβPLIs from the liver and venom glands of six Latin American pit vipers belonging to Bothrops and Crotalus genera. The inhibitor from Crotalus durissus terrificus snakes (CdtsbβPLI) was chosen as a reference for the construction of the first in silico structural model for this class of inhibitors, using molecular modeling and molecular dynamics simulations. Detailed analyses of the electrostatic surface of the CdtsbβPLI model and protein-protein docking with crotoxin B from homologous venoms predict the interacting surface between these proteins. |
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Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2Beta inhibitorsPhospholipase A 2Phospholipase A 2 inhibitorPit viperSnake liverSnake venom glandViperidaeSeveral snake species possess, in their circulating blood, endogenous PLA 2 inhibitors (sbPLIs) with the primary function of natural protection against toxic enzymes from homologous and heterologous venoms. Among the three structural classes of sbPLIs – named α, β, and γ − the β class (sbβPLIs) is the least known with only four identified sequences, so far. The last class of inhibitors encompass molecules with leucine rich repeats (LRRs) motifs containing repeating amino acid segments. In the present study, we identified and characterized putative sbβPLIs from the liver and venom glands of six Latin American pit vipers belonging to Bothrops and Crotalus genera. The inhibitor from Crotalus durissus terrificus snakes (CdtsbβPLI) was chosen as a reference for the construction of the first in silico structural model for this class of inhibitors, using molecular modeling and molecular dynamics simulations. Detailed analyses of the electrostatic surface of the CdtsbβPLI model and protein-protein docking with crotoxin B from homologous venoms predict the interacting surface between these proteins.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Serviço de Enzimologia Diretoria de Pesquisa e Desenvolvimento Fundação Ezequiel Dias (FUNED)Departamento de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP)Departamento de Genética Instituto de Biociências Universidade Estadual Paulista (UNESP)Departamento de Bioquímica e Imunologia Universidade Federal de Minas Gerais (UFMG)Departamento de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP)Departamento de Genética Instituto de Biociências Universidade Estadual Paulista (UNESP)Fundação Ezequiel Dias (FUNED)Universidade Estadual Paulista (Unesp)Universidade Federal de Minas Gerais (UFMG)Fortes-Dias, Consuelo LatorreFernandes, Carlos Alexandre H. [UNESP]Ortolani, Paula LadeiraCampos, Patrícia CotaMelo, L. A.Felicori, Liza FigueiredoFontes, Marcos Roberto M. [UNESP]2019-10-06T15:35:15Z2019-10-06T15:35:15Z2019-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.toxcx.2019.100009Toxicon: X, v. 2.2590-1710http://hdl.handle.net/11449/18740810.1016/j.toxcx.2019.1000092-s2.0-850622289214320362411241786Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengToxicon: Xinfo:eu-repo/semantics/openAccess2021-10-23T19:49:57Zoai:repositorio.unesp.br:11449/187408Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:57:48.403859Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
title |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
spellingShingle |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 Fortes-Dias, Consuelo Latorre Beta inhibitors Phospholipase A 2 Phospholipase A 2 inhibitor Pit viper Snake liver Snake venom gland Viperidae |
title_short |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
title_full |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
title_fullStr |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
title_full_unstemmed |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
title_sort |
Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2 |
author |
Fortes-Dias, Consuelo Latorre |
author_facet |
Fortes-Dias, Consuelo Latorre Fernandes, Carlos Alexandre H. [UNESP] Ortolani, Paula Ladeira Campos, Patrícia Cota Melo, L. A. Felicori, Liza Figueiredo Fontes, Marcos Roberto M. [UNESP] |
author_role |
author |
author2 |
Fernandes, Carlos Alexandre H. [UNESP] Ortolani, Paula Ladeira Campos, Patrícia Cota Melo, L. A. Felicori, Liza Figueiredo Fontes, Marcos Roberto M. [UNESP] |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Fundação Ezequiel Dias (FUNED) Universidade Estadual Paulista (Unesp) Universidade Federal de Minas Gerais (UFMG) |
dc.contributor.author.fl_str_mv |
Fortes-Dias, Consuelo Latorre Fernandes, Carlos Alexandre H. [UNESP] Ortolani, Paula Ladeira Campos, Patrícia Cota Melo, L. A. Felicori, Liza Figueiredo Fontes, Marcos Roberto M. [UNESP] |
dc.subject.por.fl_str_mv |
Beta inhibitors Phospholipase A 2 Phospholipase A 2 inhibitor Pit viper Snake liver Snake venom gland Viperidae |
topic |
Beta inhibitors Phospholipase A 2 Phospholipase A 2 inhibitor Pit viper Snake liver Snake venom gland Viperidae |
description |
Several snake species possess, in their circulating blood, endogenous PLA 2 inhibitors (sbPLIs) with the primary function of natural protection against toxic enzymes from homologous and heterologous venoms. Among the three structural classes of sbPLIs – named α, β, and γ − the β class (sbβPLIs) is the least known with only four identified sequences, so far. The last class of inhibitors encompass molecules with leucine rich repeats (LRRs) motifs containing repeating amino acid segments. In the present study, we identified and characterized putative sbβPLIs from the liver and venom glands of six Latin American pit vipers belonging to Bothrops and Crotalus genera. The inhibitor from Crotalus durissus terrificus snakes (CdtsbβPLI) was chosen as a reference for the construction of the first in silico structural model for this class of inhibitors, using molecular modeling and molecular dynamics simulations. Detailed analyses of the electrostatic surface of the CdtsbβPLI model and protein-protein docking with crotoxin B from homologous venoms predict the interacting surface between these proteins. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T15:35:15Z 2019-10-06T15:35:15Z 2019-04-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.toxcx.2019.100009 Toxicon: X, v. 2. 2590-1710 http://hdl.handle.net/11449/187408 10.1016/j.toxcx.2019.100009 2-s2.0-85062228921 4320362411241786 |
url |
http://dx.doi.org/10.1016/j.toxcx.2019.100009 http://hdl.handle.net/11449/187408 |
identifier_str_mv |
Toxicon: X, v. 2. 2590-1710 10.1016/j.toxcx.2019.100009 2-s2.0-85062228921 4320362411241786 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Toxicon: X |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129004044025856 |