In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu

Detalhes bibliográficos
Autor(a) principal: Belchor, Mariana Novo [UNESP]
Data de Publicação: 2023
Outros Autores: Costa, Caroline Ramos da Cruz [UNESP], Roggero, Airam [UNESP], Moraes, Laila L. F. [UNESP], Samelo, Ricardo [UNESP], Annunciato, Isabelly [UNESP], de Oliveira, Marcos Antonio [UNESP], Sousa, Sergio F., Toyama, Marcos Hikari [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/ph16040597
http://hdl.handle.net/11449/249915
Resumo: Quercetin derivatives have already shown their anti-inflammatory potential, inhibiting essential enzymes involved in this process. Among diverse pro-inflammatory toxins from snake venoms, phospholipase A2 is one of the most abundant in some species, such as Crotalus durissus terrificus and Bothrops jararacussu from the Viperidae family. These enzymes can induce the inflammatory process through hydrolysis at the sn-2 position of glycerophospholipids. Hence, elucidating the main residues involved in the biological effects of these macromolecules can help to identify potential compounds with inhibitory activity. In silico tools were used in this study to evaluate the potential of quercetin methylated derivatives in the inhibition of bothropstoxin I (BthTX-I) and II (BthTX-II) from Bothrops jararacussu and phospholipase A2 from Crotalus durissus terrificus. The use of a transitional analogous and two classical inhibitors of phospholipase A2 guided this work to find the role of residues involved in the phospholipid anchoring and the subsequent development of the inflammatory process. First, main cavities were studied, revealing the best regions to be inhibited by a compound. Focusing on these regions, molecular docking assays were made to show main interactions between each compound. Results reveal that analogue and inhibitors, Varespladib (Var) and p-bromophenacyl bromide (BPB), guided quercetins derivatives analysis, revealing that Leu2, Phe5, Tyr28, glycine in the calcium-binding loop, His48, Asp49 of BthTX-II and Cdtspla2 were the main residues to be inhibited. 3MQ exhibited great interaction with the active site, similar to Var results, while Q anchored better in the BthTX-II active site. However, strong interactions in the C-terminal region, highlighting His120, seem to be crucial to decreasing contacts with phospholipid and BthTX-II. Hence, quercetin derivatives anchor differently with each toxin and further in vitro and in vivo studies are essential to elucidate these data.
id UNSP_6b7c20074f1aa72bca51071af8510d56
oai_identifier_str oai:repositorio.unesp.br:11449/249915
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussuinflammationmolecular dockingnatural compoundssnake venomstoxinsQuercetin derivatives have already shown their anti-inflammatory potential, inhibiting essential enzymes involved in this process. Among diverse pro-inflammatory toxins from snake venoms, phospholipase A2 is one of the most abundant in some species, such as Crotalus durissus terrificus and Bothrops jararacussu from the Viperidae family. These enzymes can induce the inflammatory process through hydrolysis at the sn-2 position of glycerophospholipids. Hence, elucidating the main residues involved in the biological effects of these macromolecules can help to identify potential compounds with inhibitory activity. In silico tools were used in this study to evaluate the potential of quercetin methylated derivatives in the inhibition of bothropstoxin I (BthTX-I) and II (BthTX-II) from Bothrops jararacussu and phospholipase A2 from Crotalus durissus terrificus. The use of a transitional analogous and two classical inhibitors of phospholipase A2 guided this work to find the role of residues involved in the phospholipid anchoring and the subsequent development of the inflammatory process. First, main cavities were studied, revealing the best regions to be inhibited by a compound. Focusing on these regions, molecular docking assays were made to show main interactions between each compound. Results reveal that analogue and inhibitors, Varespladib (Var) and p-bromophenacyl bromide (BPB), guided quercetins derivatives analysis, revealing that Leu2, Phe5, Tyr28, glycine in the calcium-binding loop, His48, Asp49 of BthTX-II and Cdtspla2 were the main residues to be inhibited. 3MQ exhibited great interaction with the active site, similar to Var results, while Q anchored better in the BthTX-II active site. However, strong interactions in the C-terminal region, highlighting His120, seem to be crucial to decreasing contacts with phospholipid and BthTX-II. Hence, quercetin derivatives anchor differently with each toxin and further in vitro and in vivo studies are essential to elucidate these data.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Center of Natural and Human Sciences Federal University of ABC (UFABC), SPUniversity of São Paulo State (UNESP), Biosciences Institute of Paulista Coast Campus (IB/CLP), SPUnit of Applied Biomolecular Sciences (UCIBIO) REQUIMTE-BioSIM-Medicine Faculty Porto UniversityUniversity of São Paulo State (UNESP), Biosciences Institute of Paulista Coast Campus (IB/CLP), SPFAPESP: 2017/20291-0CNPq: 309271/2022-3Universidade Federal do ABC (UFABC)Universidade Estadual Paulista (UNESP)Porto UniversityBelchor, Mariana Novo [UNESP]Costa, Caroline Ramos da Cruz [UNESP]Roggero, Airam [UNESP]Moraes, Laila L. F. [UNESP]Samelo, Ricardo [UNESP]Annunciato, Isabelly [UNESP]de Oliveira, Marcos Antonio [UNESP]Sousa, Sergio F.Toyama, Marcos Hikari [UNESP]2023-07-29T16:12:44Z2023-07-29T16:12:44Z2023-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/ph16040597Pharmaceuticals, v. 16, n. 4, 2023.1424-8247http://hdl.handle.net/11449/24991510.3390/ph160405972-s2.0-85154602942Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPharmaceuticalsinfo:eu-repo/semantics/openAccess2023-07-29T16:12:44Zoai:repositorio.unesp.br:11449/249915Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:05:05.501427Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
title In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
spellingShingle In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
Belchor, Mariana Novo [UNESP]
inflammation
molecular docking
natural compounds
snake venoms
toxins
title_short In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
title_full In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
title_fullStr In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
title_full_unstemmed In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
title_sort In Silico Evaluation of Quercetin Methylated Derivatives on the Interaction with Secretory Phospholipases A2 from Crotalus durissus terrificus and Bothrops jararacussu
author Belchor, Mariana Novo [UNESP]
author_facet Belchor, Mariana Novo [UNESP]
Costa, Caroline Ramos da Cruz [UNESP]
Roggero, Airam [UNESP]
Moraes, Laila L. F. [UNESP]
Samelo, Ricardo [UNESP]
Annunciato, Isabelly [UNESP]
de Oliveira, Marcos Antonio [UNESP]
Sousa, Sergio F.
Toyama, Marcos Hikari [UNESP]
author_role author
author2 Costa, Caroline Ramos da Cruz [UNESP]
Roggero, Airam [UNESP]
Moraes, Laila L. F. [UNESP]
Samelo, Ricardo [UNESP]
Annunciato, Isabelly [UNESP]
de Oliveira, Marcos Antonio [UNESP]
Sousa, Sergio F.
Toyama, Marcos Hikari [UNESP]
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal do ABC (UFABC)
Universidade Estadual Paulista (UNESP)
Porto University
dc.contributor.author.fl_str_mv Belchor, Mariana Novo [UNESP]
Costa, Caroline Ramos da Cruz [UNESP]
Roggero, Airam [UNESP]
Moraes, Laila L. F. [UNESP]
Samelo, Ricardo [UNESP]
Annunciato, Isabelly [UNESP]
de Oliveira, Marcos Antonio [UNESP]
Sousa, Sergio F.
Toyama, Marcos Hikari [UNESP]
dc.subject.por.fl_str_mv inflammation
molecular docking
natural compounds
snake venoms
toxins
topic inflammation
molecular docking
natural compounds
snake venoms
toxins
description Quercetin derivatives have already shown their anti-inflammatory potential, inhibiting essential enzymes involved in this process. Among diverse pro-inflammatory toxins from snake venoms, phospholipase A2 is one of the most abundant in some species, such as Crotalus durissus terrificus and Bothrops jararacussu from the Viperidae family. These enzymes can induce the inflammatory process through hydrolysis at the sn-2 position of glycerophospholipids. Hence, elucidating the main residues involved in the biological effects of these macromolecules can help to identify potential compounds with inhibitory activity. In silico tools were used in this study to evaluate the potential of quercetin methylated derivatives in the inhibition of bothropstoxin I (BthTX-I) and II (BthTX-II) from Bothrops jararacussu and phospholipase A2 from Crotalus durissus terrificus. The use of a transitional analogous and two classical inhibitors of phospholipase A2 guided this work to find the role of residues involved in the phospholipid anchoring and the subsequent development of the inflammatory process. First, main cavities were studied, revealing the best regions to be inhibited by a compound. Focusing on these regions, molecular docking assays were made to show main interactions between each compound. Results reveal that analogue and inhibitors, Varespladib (Var) and p-bromophenacyl bromide (BPB), guided quercetins derivatives analysis, revealing that Leu2, Phe5, Tyr28, glycine in the calcium-binding loop, His48, Asp49 of BthTX-II and Cdtspla2 were the main residues to be inhibited. 3MQ exhibited great interaction with the active site, similar to Var results, while Q anchored better in the BthTX-II active site. However, strong interactions in the C-terminal region, highlighting His120, seem to be crucial to decreasing contacts with phospholipid and BthTX-II. Hence, quercetin derivatives anchor differently with each toxin and further in vitro and in vivo studies are essential to elucidate these data.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T16:12:44Z
2023-07-29T16:12:44Z
2023-04-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/ph16040597
Pharmaceuticals, v. 16, n. 4, 2023.
1424-8247
http://hdl.handle.net/11449/249915
10.3390/ph16040597
2-s2.0-85154602942
url http://dx.doi.org/10.3390/ph16040597
http://hdl.handle.net/11449/249915
identifier_str_mv Pharmaceuticals, v. 16, n. 4, 2023.
1424-8247
10.3390/ph16040597
2-s2.0-85154602942
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Pharmaceuticals
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808128313271517184