Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttext http://hdl.handle.net/11449/18940 |
Resumo: | The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit (R)) and polymerase chain reaction (PCR)-based methods. of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. |
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Diagnosis of Giardia infections by PCR-based methods in children of an endemic areaGiardia duodenalischildrendiagnosisPCRThe present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit (R)) and polymerase chain reaction (PCR)-based methods. of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)UNESP Univ Estadual Paulista, São Paulo State Univ, Dept Parasitol, Botucatu Biosci Inst, Botucatu, SP, BrazilUniv Sagrado Coracao, USC, Dept Biol & Hlth Sci, Bauru, SP, BrazilUNESP Univ Estadual Paulista, São Paulo State Univ, Dept Parasitol, Botucatu Biosci Inst, Botucatu, SP, BrazilFAPESP: 06/56151-3Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)Universidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)David, E. B. [UNESP]Coradi, S. T.Oliveira-Sequeira, T. C. G. [UNESP]Ribolla, P. E. M. [UNESP]Katagiri, S. [UNESP]Guimaraes, S. [UNESP]2014-05-20T13:53:06Z2014-05-20T13:53:06Z2011-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article209-215application/pdfhttp://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttextJournal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 17, n. 2, p. 209-215, 2011.1678-9199http://hdl.handle.net/11449/18940S1678-91992011000200012WOS:000290866500012S1678-91992011000200012.pdf35771497484568800000-0001-8735-6090Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Venomous Animals and Toxins Including Tropical Diseases1.7820,573info:eu-repo/semantics/openAccess2024-01-13T06:33:28Zoai:repositorio.unesp.br:11449/18940Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:51:44.943589Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
spellingShingle |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area David, E. B. [UNESP] Giardia duodenalis children diagnosis PCR |
title_short |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_full |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_fullStr |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_full_unstemmed |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_sort |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
author |
David, E. B. [UNESP] |
author_facet |
David, E. B. [UNESP] Coradi, S. T. Oliveira-Sequeira, T. C. G. [UNESP] Ribolla, P. E. M. [UNESP] Katagiri, S. [UNESP] Guimaraes, S. [UNESP] |
author_role |
author |
author2 |
Coradi, S. T. Oliveira-Sequeira, T. C. G. [UNESP] Ribolla, P. E. M. [UNESP] Katagiri, S. [UNESP] Guimaraes, S. [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade de São Paulo (USP) |
dc.contributor.author.fl_str_mv |
David, E. B. [UNESP] Coradi, S. T. Oliveira-Sequeira, T. C. G. [UNESP] Ribolla, P. E. M. [UNESP] Katagiri, S. [UNESP] Guimaraes, S. [UNESP] |
dc.subject.por.fl_str_mv |
Giardia duodenalis children diagnosis PCR |
topic |
Giardia duodenalis children diagnosis PCR |
description |
The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit (R)) and polymerase chain reaction (PCR)-based methods. of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-01-01 2014-05-20T13:53:06Z 2014-05-20T13:53:06Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttext Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 17, n. 2, p. 209-215, 2011. 1678-9199 http://hdl.handle.net/11449/18940 S1678-91992011000200012 WOS:000290866500012 S1678-91992011000200012.pdf 3577149748456880 0000-0001-8735-6090 |
url |
http://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttext http://hdl.handle.net/11449/18940 |
identifier_str_mv |
Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 17, n. 2, p. 209-215, 2011. 1678-9199 S1678-91992011000200012 WOS:000290866500012 S1678-91992011000200012.pdf 3577149748456880 0000-0001-8735-6090 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Venomous Animals and Toxins Including Tropical Diseases 1.782 0,573 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
209-215 application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP) |
publisher.none.fl_str_mv |
Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP) |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129468121743360 |