Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/s1678-91992011000200012 http://hdl.handle.net/11449/226362 |
Resumo: | The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit®) and polymerase chain reaction (PCR)-based methods. Of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. © CEVAP 2011. |
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Diagnosis of Giardia infections by PCR-based methods in children of an endemic areaChildrenDiagnosisGiardia duodenalisPCRThe present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit®) and polymerase chain reaction (PCR)-based methods. Of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. © CEVAP 2011.Department of Parasitology Botucatu Biosciences Institute São Paulo State University (UNESP - Univ Estadual Paulista), Botucatu, São Paulo StateDepartment of Biological and Health Sciences Sacred Heart University USC, Bauru, São Paulo StateDepartment of Parasitology Botucatu Biosciences Institute São Paulo State University (UNESP - Univ Estadual Paulista), Botucatu, São Paulo StateUniversidade Estadual Paulista (UNESP)USCDavid, E. B. [UNESP]Coradi, S. T.Oliveira-Sequeira, T. C.G. [UNESP]Ribolla, P. E.M. [UNESP]Katagiri, S. [UNESP]Guimarães, S. [UNESP]2022-04-28T22:37:27Z2022-04-28T22:37:27Z2011-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article209-215http://dx.doi.org/10.1590/s1678-91992011000200012Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 17, n. 2, p. 209-215, 2011.1678-9199http://hdl.handle.net/11449/22636210.1590/s1678-919920110002000122-s2.0-79958168406Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Venomous Animals and Toxins Including Tropical Diseasesinfo:eu-repo/semantics/openAccess2022-04-28T22:37:27Zoai:repositorio.unesp.br:11449/226362Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T17:57:24.582115Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
spellingShingle |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area David, E. B. [UNESP] Children Diagnosis Giardia duodenalis PCR |
title_short |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_full |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_fullStr |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_full_unstemmed |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
title_sort |
Diagnosis of Giardia infections by PCR-based methods in children of an endemic area |
author |
David, E. B. [UNESP] |
author_facet |
David, E. B. [UNESP] Coradi, S. T. Oliveira-Sequeira, T. C.G. [UNESP] Ribolla, P. E.M. [UNESP] Katagiri, S. [UNESP] Guimarães, S. [UNESP] |
author_role |
author |
author2 |
Coradi, S. T. Oliveira-Sequeira, T. C.G. [UNESP] Ribolla, P. E.M. [UNESP] Katagiri, S. [UNESP] Guimarães, S. [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) USC |
dc.contributor.author.fl_str_mv |
David, E. B. [UNESP] Coradi, S. T. Oliveira-Sequeira, T. C.G. [UNESP] Ribolla, P. E.M. [UNESP] Katagiri, S. [UNESP] Guimarães, S. [UNESP] |
dc.subject.por.fl_str_mv |
Children Diagnosis Giardia duodenalis PCR |
topic |
Children Diagnosis Giardia duodenalis PCR |
description |
The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit®) and polymerase chain reaction (PCR)-based methods. Of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. © CEVAP 2011. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-01-01 2022-04-28T22:37:27Z 2022-04-28T22:37:27Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/s1678-91992011000200012 Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 17, n. 2, p. 209-215, 2011. 1678-9199 http://hdl.handle.net/11449/226362 10.1590/s1678-91992011000200012 2-s2.0-79958168406 |
url |
http://dx.doi.org/10.1590/s1678-91992011000200012 http://hdl.handle.net/11449/226362 |
identifier_str_mv |
Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 17, n. 2, p. 209-215, 2011. 1678-9199 10.1590/s1678-91992011000200012 2-s2.0-79958168406 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Venomous Animals and Toxins Including Tropical Diseases |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
209-215 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128878021967872 |