Defense response-like reaction associated with an anomaly in Eucalyptus grandis

Detalhes bibliográficos
Autor(a) principal: Fuchs, Maria C. P. [UNESP]
Data de Publicação: 2022
Outros Autores: Rossini, Bruno C. [UNESP], Acencio, Marcio L. [UNESP], Lemke, Ney [UNESP], González, Esteban R., Moricca, Salvatore, Panzavolta, Tiziana, Furtado, Edson L. [UNESP], Oda, Shinitiro, Marino, Celso L. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s00468-022-02288-y
http://hdl.handle.net/11449/234321
Resumo: Key message: Based on transcriptome and qPCR analysis, a phenotypic abnormality resulting from a Eucalyptus crossing is associated with overexpression of metabolic pathways related to defense responses against biotic and abiotic stress. Abstract: Genetic recombination by outcrossing, a strategy used in improvement programs, can present a low frequency of individuals within progeny with morphological and physiological abnormalities. An abnormality was identified in progeny from a controlled cross of Eucalyptus grandis. Applying RNA-Seq technology to leaf, stem, and root tissue of normal and abnormal seedlings grown under the same greenhouse conditions, we examined global gene expression changes and compared the transcriptional profiles of the two contrasting phenotypes. We also conducted functional enrichment and metabolic pathway analyses. Among the identified differentially expressed genes, most were upregulated in leaf and stem tissues of abnormal plants, with gene ontology (GO) terms associated with 'response to stress', 'response to stimulus', and 'immune system process' categories. Further, in differential gene expression and functional enrichment analyses, we observed overexpression of metabolic pathways related to defense response processes in abnormal plants. Our results suggest that the anomaly is associated with changes in the defense response to biotic and abiotic stresses. As all progeny were grown in a controlled environment and there was no evidence of pathogenic attacks, the defense response in abnormal plants may be due to an autoimmune mechanism caused by genetic incompatibility.
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spelling Defense response-like reaction associated with an anomaly in Eucalyptus grandisAutoimmune syndromeDefense responseDeleterious phenotypeDifferential gene expressionGenetic incompatibilityKey message: Based on transcriptome and qPCR analysis, a phenotypic abnormality resulting from a Eucalyptus crossing is associated with overexpression of metabolic pathways related to defense responses against biotic and abiotic stress. Abstract: Genetic recombination by outcrossing, a strategy used in improvement programs, can present a low frequency of individuals within progeny with morphological and physiological abnormalities. An abnormality was identified in progeny from a controlled cross of Eucalyptus grandis. Applying RNA-Seq technology to leaf, stem, and root tissue of normal and abnormal seedlings grown under the same greenhouse conditions, we examined global gene expression changes and compared the transcriptional profiles of the two contrasting phenotypes. We also conducted functional enrichment and metabolic pathway analyses. Among the identified differentially expressed genes, most were upregulated in leaf and stem tissues of abnormal plants, with gene ontology (GO) terms associated with 'response to stress', 'response to stimulus', and 'immune system process' categories. Further, in differential gene expression and functional enrichment analyses, we observed overexpression of metabolic pathways related to defense response processes in abnormal plants. Our results suggest that the anomaly is associated with changes in the defense response to biotic and abiotic stresses. As all progeny were grown in a controlled environment and there was no evidence of pathogenic attacks, the defense response in abnormal plants may be due to an autoimmune mechanism caused by genetic incompatibility.Departamento de Ciências Químicas e Biológicas Instituto de Biociências Universidade Estadual Paulista (UNESP), SPInstituto de Biotecnologia Universidade Estadual Paulista (UNESP), SPDepartamento de Biofísica e Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), SPLuxembourg Centre for Systems Biomedicine (LCSB) University of LuxembourgEmpresa Suzano Papel e Celulose SA, Av. Dr. José Lembo 1010, SPPlant Pathology and Entomology Section Department of Agricultural Food Environmental and Forestry Science and Technology (DAGRI) University of Florence, Florence provinceSchool of Agriculture São Paulo State University (Unesp), SPDepartamento de Ciências Químicas e Biológicas Instituto de Biociências Universidade Estadual Paulista (UNESP), SPInstituto de Biotecnologia Universidade Estadual Paulista (UNESP), SPDepartamento de Biofísica e Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), SPSchool of Agriculture São Paulo State University (Unesp), SPUniversidade Estadual Paulista (UNESP)University of LuxembourgEmpresa Suzano Papel e Celulose SAUniversity of FlorenceFuchs, Maria C. P. [UNESP]Rossini, Bruno C. [UNESP]Acencio, Marcio L. [UNESP]Lemke, Ney [UNESP]González, Esteban R.Moricca, SalvatorePanzavolta, TizianaFurtado, Edson L. [UNESP]Oda, ShinitiroMarino, Celso L. [UNESP]2022-05-01T15:46:21Z2022-05-01T15:46:21Z2022-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1007/s00468-022-02288-yTrees - Structure and Function.0931-1890http://hdl.handle.net/11449/23432110.1007/s00468-022-02288-y2-s2.0-85127188011Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengTrees - Structure and Functioninfo:eu-repo/semantics/openAccess2022-05-01T15:46:21Zoai:repositorio.unesp.br:11449/234321Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:04:48.833567Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Defense response-like reaction associated with an anomaly in Eucalyptus grandis
title Defense response-like reaction associated with an anomaly in Eucalyptus grandis
spellingShingle Defense response-like reaction associated with an anomaly in Eucalyptus grandis
Fuchs, Maria C. P. [UNESP]
Autoimmune syndrome
Defense response
Deleterious phenotype
Differential gene expression
Genetic incompatibility
title_short Defense response-like reaction associated with an anomaly in Eucalyptus grandis
title_full Defense response-like reaction associated with an anomaly in Eucalyptus grandis
title_fullStr Defense response-like reaction associated with an anomaly in Eucalyptus grandis
title_full_unstemmed Defense response-like reaction associated with an anomaly in Eucalyptus grandis
title_sort Defense response-like reaction associated with an anomaly in Eucalyptus grandis
author Fuchs, Maria C. P. [UNESP]
author_facet Fuchs, Maria C. P. [UNESP]
Rossini, Bruno C. [UNESP]
Acencio, Marcio L. [UNESP]
Lemke, Ney [UNESP]
González, Esteban R.
Moricca, Salvatore
Panzavolta, Tiziana
Furtado, Edson L. [UNESP]
Oda, Shinitiro
Marino, Celso L. [UNESP]
author_role author
author2 Rossini, Bruno C. [UNESP]
Acencio, Marcio L. [UNESP]
Lemke, Ney [UNESP]
González, Esteban R.
Moricca, Salvatore
Panzavolta, Tiziana
Furtado, Edson L. [UNESP]
Oda, Shinitiro
Marino, Celso L. [UNESP]
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
University of Luxembourg
Empresa Suzano Papel e Celulose SA
University of Florence
dc.contributor.author.fl_str_mv Fuchs, Maria C. P. [UNESP]
Rossini, Bruno C. [UNESP]
Acencio, Marcio L. [UNESP]
Lemke, Ney [UNESP]
González, Esteban R.
Moricca, Salvatore
Panzavolta, Tiziana
Furtado, Edson L. [UNESP]
Oda, Shinitiro
Marino, Celso L. [UNESP]
dc.subject.por.fl_str_mv Autoimmune syndrome
Defense response
Deleterious phenotype
Differential gene expression
Genetic incompatibility
topic Autoimmune syndrome
Defense response
Deleterious phenotype
Differential gene expression
Genetic incompatibility
description Key message: Based on transcriptome and qPCR analysis, a phenotypic abnormality resulting from a Eucalyptus crossing is associated with overexpression of metabolic pathways related to defense responses against biotic and abiotic stress. Abstract: Genetic recombination by outcrossing, a strategy used in improvement programs, can present a low frequency of individuals within progeny with morphological and physiological abnormalities. An abnormality was identified in progeny from a controlled cross of Eucalyptus grandis. Applying RNA-Seq technology to leaf, stem, and root tissue of normal and abnormal seedlings grown under the same greenhouse conditions, we examined global gene expression changes and compared the transcriptional profiles of the two contrasting phenotypes. We also conducted functional enrichment and metabolic pathway analyses. Among the identified differentially expressed genes, most were upregulated in leaf and stem tissues of abnormal plants, with gene ontology (GO) terms associated with 'response to stress', 'response to stimulus', and 'immune system process' categories. Further, in differential gene expression and functional enrichment analyses, we observed overexpression of metabolic pathways related to defense response processes in abnormal plants. Our results suggest that the anomaly is associated with changes in the defense response to biotic and abiotic stresses. As all progeny were grown in a controlled environment and there was no evidence of pathogenic attacks, the defense response in abnormal plants may be due to an autoimmune mechanism caused by genetic incompatibility.
publishDate 2022
dc.date.none.fl_str_mv 2022-05-01T15:46:21Z
2022-05-01T15:46:21Z
2022-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s00468-022-02288-y
Trees - Structure and Function.
0931-1890
http://hdl.handle.net/11449/234321
10.1007/s00468-022-02288-y
2-s2.0-85127188011
url http://dx.doi.org/10.1007/s00468-022-02288-y
http://hdl.handle.net/11449/234321
identifier_str_mv Trees - Structure and Function.
0931-1890
10.1007/s00468-022-02288-y
2-s2.0-85127188011
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Trees - Structure and Function
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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