Optimizing sentinel surveillance in temporal network epidemiology

Detalhes bibliográficos
Autor(a) principal: Bai, Yuan
Data de Publicação: 2017
Outros Autores: Yang, Bo, Lin, Lijuan, Herrera, Jose L. [UNESP], Du, Zhanwei, Holme, Petter
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-017-03868-6
http://hdl.handle.net/11449/159605
Resumo: To help health policy makers gain response time to mitigate infectious disease threats, it is essential to have an efficient epidemic surveillance. One common method of disease surveillance is to carefully select nodes (sentinels, or sensors) in the network to report outbreaks. One would like to choose sentinels so that they discover the outbreak as early as possible. The optimal choice of sentinels depends on the network structure. Studies have addressed this problem for static networks, but this is a first step study to explore designing surveillance systems for early detection on temporal networks. This paper is based on the idea that vaccination strategies can serve as a method to identify sentinels. The vaccination problem is a related question that is much more well studied for temporal networks. To assess the ability to detect epidemic outbreaks early, we calculate the time difference (lead time) between the surveillance set and whole population in reaching 1% prevalence. We find that the optimal selection of sentinels depends on both the network's temporal structures and the infection probability of the disease. We find that, for a mild infectious disease (low infection probability) on a temporal network in relation to potential disease spreading (the Prostitution network), the strategy of selecting latest contacts of random individuals provide the most amount of lead time. And for a more uniform, synthetic network with community structure the strategy of selecting frequent contacts of random individuals provide the most amount of lead time.
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spelling Optimizing sentinel surveillance in temporal network epidemiologyTo help health policy makers gain response time to mitigate infectious disease threats, it is essential to have an efficient epidemic surveillance. One common method of disease surveillance is to carefully select nodes (sentinels, or sensors) in the network to report outbreaks. One would like to choose sentinels so that they discover the outbreak as early as possible. The optimal choice of sentinels depends on the network structure. Studies have addressed this problem for static networks, but this is a first step study to explore designing surveillance systems for early detection on temporal networks. This paper is based on the idea that vaccination strategies can serve as a method to identify sentinels. The vaccination problem is a related question that is much more well studied for temporal networks. To assess the ability to detect epidemic outbreaks early, we calculate the time difference (lead time) between the surveillance set and whole population in reaching 1% prevalence. We find that the optimal selection of sentinels depends on both the network's temporal structures and the infection probability of the disease. We find that, for a mild infectious disease (low infection probability) on a temporal network in relation to potential disease spreading (the Prostitution network), the strategy of selecting latest contacts of random individuals provide the most amount of lead time. And for a more uniform, synthetic network with community structure the strategy of selecting frequent contacts of random individuals provide the most amount of lead time.National Natural Science Foundation of ChinaJilin Univ, Coll Comp Sci & Technol, Changchun 130012, Peoples R ChinaJilin Univ, Minist Educ, Key Lab Symbol Computat & Knowledge Engn, Changchun 130012, Peoples R ChinaUniv Texas Austin, Dept Integrat Biol, Austin, TX 78705 USASao Paulo State Univ, ICTP South Amer Inst Fundamental Res, BR-03001000 Sao Paulo, BrazilTokyo Inst Technol, Inst Innovat Res, Tokyo 1528550, JapanSao Paulo State Univ, ICTP South Amer Inst Fundamental Res, BR-03001000 Sao Paulo, BrazilNational Natural Science Foundation of China: 61572226National Natural Science Foundation of China: 61373053Nature Publishing GroupJilin UnivUniv Texas AustinUniversidade Estadual Paulista (Unesp)Tokyo Inst TechnolBai, YuanYang, BoLin, LijuanHerrera, Jose L. [UNESP]Du, ZhanweiHolme, Petter2018-11-26T15:44:38Z2018-11-26T15:44:38Z2017-07-06info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article10http://dx.doi.org/10.1038/s41598-017-03868-6Scientific Reports. London: Nature Publishing Group, v. 7, 10 p., 2017.2045-2322http://hdl.handle.net/11449/15960510.1038/s41598-017-03868-6WOS:000404841100060WOS000404841100060.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reports1,533info:eu-repo/semantics/openAccess2021-10-23T16:51:38Zoai:repositorio.unesp.br:11449/159605Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T16:51:38Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Optimizing sentinel surveillance in temporal network epidemiology
title Optimizing sentinel surveillance in temporal network epidemiology
spellingShingle Optimizing sentinel surveillance in temporal network epidemiology
Bai, Yuan
title_short Optimizing sentinel surveillance in temporal network epidemiology
title_full Optimizing sentinel surveillance in temporal network epidemiology
title_fullStr Optimizing sentinel surveillance in temporal network epidemiology
title_full_unstemmed Optimizing sentinel surveillance in temporal network epidemiology
title_sort Optimizing sentinel surveillance in temporal network epidemiology
author Bai, Yuan
author_facet Bai, Yuan
Yang, Bo
Lin, Lijuan
Herrera, Jose L. [UNESP]
Du, Zhanwei
Holme, Petter
author_role author
author2 Yang, Bo
Lin, Lijuan
Herrera, Jose L. [UNESP]
Du, Zhanwei
Holme, Petter
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Jilin Univ
Univ Texas Austin
Universidade Estadual Paulista (Unesp)
Tokyo Inst Technol
dc.contributor.author.fl_str_mv Bai, Yuan
Yang, Bo
Lin, Lijuan
Herrera, Jose L. [UNESP]
Du, Zhanwei
Holme, Petter
description To help health policy makers gain response time to mitigate infectious disease threats, it is essential to have an efficient epidemic surveillance. One common method of disease surveillance is to carefully select nodes (sentinels, or sensors) in the network to report outbreaks. One would like to choose sentinels so that they discover the outbreak as early as possible. The optimal choice of sentinels depends on the network structure. Studies have addressed this problem for static networks, but this is a first step study to explore designing surveillance systems for early detection on temporal networks. This paper is based on the idea that vaccination strategies can serve as a method to identify sentinels. The vaccination problem is a related question that is much more well studied for temporal networks. To assess the ability to detect epidemic outbreaks early, we calculate the time difference (lead time) between the surveillance set and whole population in reaching 1% prevalence. We find that the optimal selection of sentinels depends on both the network's temporal structures and the infection probability of the disease. We find that, for a mild infectious disease (low infection probability) on a temporal network in relation to potential disease spreading (the Prostitution network), the strategy of selecting latest contacts of random individuals provide the most amount of lead time. And for a more uniform, synthetic network with community structure the strategy of selecting frequent contacts of random individuals provide the most amount of lead time.
publishDate 2017
dc.date.none.fl_str_mv 2017-07-06
2018-11-26T15:44:38Z
2018-11-26T15:44:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-017-03868-6
Scientific Reports. London: Nature Publishing Group, v. 7, 10 p., 2017.
2045-2322
http://hdl.handle.net/11449/159605
10.1038/s41598-017-03868-6
WOS:000404841100060
WOS000404841100060.pdf
url http://dx.doi.org/10.1038/s41598-017-03868-6
http://hdl.handle.net/11449/159605
identifier_str_mv Scientific Reports. London: Nature Publishing Group, v. 7, 10 p., 2017.
2045-2322
10.1038/s41598-017-03868-6
WOS:000404841100060
WOS000404841100060.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
1,533
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 10
dc.publisher.none.fl_str_mv Nature Publishing Group
publisher.none.fl_str_mv Nature Publishing Group
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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