Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1021/acs.jpcb.1c04372 http://hdl.handle.net/11449/229662 |
Resumo: | Accurately simulating the properties of bulk water, despite the apparent simplicity of the molecule, is still a challenge. In order to fully understand and reproduce its complex phase diagram, it is necessary to perform simulations at the ab initio level, including quantum mechanical effects both for electrons and nuclei. This comes at a high computational cost, given that the structural and dynamical properties tend to require long timescales and large simulation cells. In this work, we evaluate the errors that density functional theory (DFT)-based simulations routinely incur into due time- and size-scale limitations. These errors are evaluated using neural-network-trained force fields that are accurate at the level of DFT methods. We compare different exchange and correlation potentials for properties of bulk water that require large timescales. We show that structural properties are less dependent on the system size and that dynamical properties such as the diffusion coefficient have a strong dependence on the simulation size and timescale. Our results facilitate comparisons of DFT-based simulation results with experiments and offer a path to discriminate between model and convergence errors in these simulations. |
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Repositório Institucional da UNESP |
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spelling |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid WaterAccurately simulating the properties of bulk water, despite the apparent simplicity of the molecule, is still a challenge. In order to fully understand and reproduce its complex phase diagram, it is necessary to perform simulations at the ab initio level, including quantum mechanical effects both for electrons and nuclei. This comes at a high computational cost, given that the structural and dynamical properties tend to require long timescales and large simulation cells. In this work, we evaluate the errors that density functional theory (DFT)-based simulations routinely incur into due time- and size-scale limitations. These errors are evaluated using neural-network-trained force fields that are accurate at the level of DFT methods. We compare different exchange and correlation potentials for properties of bulk water that require large timescales. We show that structural properties are less dependent on the system size and that dynamical properties such as the diffusion coefficient have a strong dependence on the simulation size and timescale. Our results facilitate comparisons of DFT-based simulation results with experiments and offer a path to discriminate between model and convergence errors in these simulations.Institute of Theoretical Physics São Paulo State University (UNESP) Campus São PauloCentro de Ciências Naturais e Humanas Universidade Federal Do AbcState University of New York at StonybrookInstitute of Theoretical Physics São Paulo State University (UNESP) Campus São PauloUniversidade Estadual Paulista (UNESP)Universidade Federal do ABC (UFABC)State University of New York at StonybrookTorres, Alberto [UNESP]Pedroza, Luana S.Fernandez-Serra, MariviRocha, Alexandre R. [UNESP]2022-04-29T08:35:00Z2022-04-29T08:35:00Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1021/acs.jpcb.1c04372Journal of Physical Chemistry B.1520-52071520-6106http://hdl.handle.net/11449/22966210.1021/acs.jpcb.1c043722-s2.0-85116554866Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Physical Chemistry Binfo:eu-repo/semantics/openAccess2022-04-29T08:35:00Zoai:repositorio.unesp.br:11449/229662Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:24:00.432390Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
title |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
spellingShingle |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water Torres, Alberto [UNESP] |
title_short |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
title_full |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
title_fullStr |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
title_full_unstemmed |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
title_sort |
Using Neural Network Force Fields to Ascertain the Quality of Ab Initio Simulations of Liquid Water |
author |
Torres, Alberto [UNESP] |
author_facet |
Torres, Alberto [UNESP] Pedroza, Luana S. Fernandez-Serra, Marivi Rocha, Alexandre R. [UNESP] |
author_role |
author |
author2 |
Pedroza, Luana S. Fernandez-Serra, Marivi Rocha, Alexandre R. [UNESP] |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) Universidade Federal do ABC (UFABC) State University of New York at Stonybrook |
dc.contributor.author.fl_str_mv |
Torres, Alberto [UNESP] Pedroza, Luana S. Fernandez-Serra, Marivi Rocha, Alexandre R. [UNESP] |
description |
Accurately simulating the properties of bulk water, despite the apparent simplicity of the molecule, is still a challenge. In order to fully understand and reproduce its complex phase diagram, it is necessary to perform simulations at the ab initio level, including quantum mechanical effects both for electrons and nuclei. This comes at a high computational cost, given that the structural and dynamical properties tend to require long timescales and large simulation cells. In this work, we evaluate the errors that density functional theory (DFT)-based simulations routinely incur into due time- and size-scale limitations. These errors are evaluated using neural-network-trained force fields that are accurate at the level of DFT methods. We compare different exchange and correlation potentials for properties of bulk water that require large timescales. We show that structural properties are less dependent on the system size and that dynamical properties such as the diffusion coefficient have a strong dependence on the simulation size and timescale. Our results facilitate comparisons of DFT-based simulation results with experiments and offer a path to discriminate between model and convergence errors in these simulations. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-01-01 2022-04-29T08:35:00Z 2022-04-29T08:35:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1021/acs.jpcb.1c04372 Journal of Physical Chemistry B. 1520-5207 1520-6106 http://hdl.handle.net/11449/229662 10.1021/acs.jpcb.1c04372 2-s2.0-85116554866 |
url |
http://dx.doi.org/10.1021/acs.jpcb.1c04372 http://hdl.handle.net/11449/229662 |
identifier_str_mv |
Journal of Physical Chemistry B. 1520-5207 1520-6106 10.1021/acs.jpcb.1c04372 2-s2.0-85116554866 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Physical Chemistry B |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128508431433728 |